Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G73260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042430: indole-containing compound metabolic process0.00E+00
2GO:0046177: D-gluconate catabolic process0.00E+00
3GO:0023052: signaling0.00E+00
4GO:1903647: negative regulation of chlorophyll catabolic process0.00E+00
5GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
6GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
7GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase0.00E+00
8GO:0009856: pollination0.00E+00
9GO:0018293: protein-FAD linkage0.00E+00
10GO:0034553: mitochondrial respiratory chain complex II assembly0.00E+00
11GO:0006593: ornithine catabolic process0.00E+00
12GO:0055114: oxidation-reduction process4.43E-06
13GO:0005975: carbohydrate metabolic process1.87E-05
14GO:0006099: tricarboxylic acid cycle6.67E-05
15GO:0006121: mitochondrial electron transport, succinate to ubiquinone7.90E-05
16GO:0009651: response to salt stress8.20E-05
17GO:0010189: vitamin E biosynthetic process1.10E-04
18GO:1903409: reactive oxygen species biosynthetic process2.16E-04
19GO:0009852: auxin catabolic process2.16E-04
20GO:1901349: glucosinolate transport2.16E-04
21GO:0031539: positive regulation of anthocyanin metabolic process2.16E-04
22GO:0090449: phloem glucosinolate loading2.16E-04
23GO:0019544: arginine catabolic process to glutamate2.16E-04
24GO:0015798: myo-inositol transport2.16E-04
25GO:0006148: inosine catabolic process2.16E-04
26GO:0080144: amino acid homeostasis2.78E-04
27GO:0009817: defense response to fungus, incompatible interaction4.80E-04
28GO:0009915: phloem sucrose loading4.81E-04
29GO:0002215: defense response to nematode4.81E-04
30GO:0032527: protein exit from endoplasmic reticulum4.81E-04
31GO:0080026: response to indolebutyric acid4.81E-04
32GO:0046939: nucleotide phosphorylation4.81E-04
33GO:0002213: defense response to insect5.15E-04
34GO:0006006: glucose metabolic process5.83E-04
35GO:0042343: indole glucosinolate metabolic process7.34E-04
36GO:0051646: mitochondrion localization7.83E-04
37GO:0045493: xylan catabolic process7.83E-04
38GO:0044746: amino acid transmembrane export7.83E-04
39GO:0042753: positive regulation of circadian rhythm8.16E-04
40GO:0009833: plant-type primary cell wall biogenesis8.16E-04
41GO:0009636: response to toxic substance1.03E-03
42GO:0048511: rhythmic process1.09E-03
43GO:0098542: defense response to other organism1.09E-03
44GO:0009963: positive regulation of flavonoid biosynthetic process1.12E-03
45GO:0080024: indolebutyric acid metabolic process1.12E-03
46GO:0006572: tyrosine catabolic process1.12E-03
47GO:0046836: glycolipid transport1.12E-03
48GO:1902476: chloride transmembrane transport1.12E-03
49GO:0010017: red or far-red light signaling pathway1.18E-03
50GO:0015846: polyamine transport1.48E-03
51GO:0032366: intracellular sterol transport1.48E-03
52GO:0006542: glutamine biosynthetic process1.48E-03
53GO:0006646: phosphatidylethanolamine biosynthetic process1.48E-03
54GO:0000271: polysaccharide biosynthetic process1.63E-03
55GO:0080022: primary root development1.63E-03
56GO:0042391: regulation of membrane potential1.63E-03
57GO:0009697: salicylic acid biosynthetic process1.89E-03
58GO:0006564: L-serine biosynthetic process1.89E-03
59GO:0005513: detection of calcium ion1.89E-03
60GO:0007029: endoplasmic reticulum organization1.89E-03
61GO:0044550: secondary metabolite biosynthetic process2.15E-03
62GO:0042732: D-xylose metabolic process2.33E-03
63GO:0003006: developmental process involved in reproduction2.33E-03
64GO:0006561: proline biosynthetic process2.33E-03
65GO:1901657: glycosyl compound metabolic process2.46E-03
66GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.80E-03
67GO:0010019: chloroplast-nucleus signaling pathway2.80E-03
68GO:0009648: photoperiodism2.80E-03
69GO:0009058: biosynthetic process2.86E-03
70GO:0009615: response to virus3.12E-03
71GO:0006821: chloride transport3.30E-03
72GO:0030026: cellular manganese ion homeostasis3.30E-03
73GO:0009816: defense response to bacterium, incompatible interaction3.30E-03
74GO:0022904: respiratory electron transport chain3.30E-03
75GO:0010044: response to aluminum ion3.30E-03
76GO:0006880: intracellular sequestering of iron ion3.30E-03
77GO:0080027: response to herbivore3.30E-03
78GO:0009627: systemic acquired resistance3.48E-03
79GO:0009787: regulation of abscisic acid-activated signaling pathway3.82E-03
80GO:0009642: response to light intensity3.82E-03
81GO:0048658: anther wall tapetum development3.82E-03
82GO:0006102: isocitrate metabolic process3.82E-03
83GO:0010150: leaf senescence4.02E-03
84GO:0030244: cellulose biosynthetic process4.06E-03
85GO:0015996: chlorophyll catabolic process4.38E-03
86GO:0006972: hyperosmotic response4.38E-03
87GO:0010099: regulation of photomorphogenesis4.38E-03
88GO:0009407: toxin catabolic process4.48E-03
89GO:0046686: response to cadmium ion4.79E-03
90GO:0009821: alkaloid biosynthetic process4.95E-03
91GO:0006098: pentose-phosphate shunt4.95E-03
92GO:0034765: regulation of ion transmembrane transport4.95E-03
93GO:0009060: aerobic respiration4.95E-03
94GO:0009853: photorespiration5.14E-03
95GO:0048354: mucilage biosynthetic process involved in seed coat development5.56E-03
96GO:0006631: fatty acid metabolic process6.11E-03
97GO:0006032: chitin catabolic process6.18E-03
98GO:0010192: mucilage biosynthetic process6.18E-03
99GO:0006508: proteolysis6.39E-03
100GO:0052544: defense response by callose deposition in cell wall6.84E-03
101GO:0000272: polysaccharide catabolic process6.84E-03
102GO:0009684: indoleacetic acid biosynthetic process6.84E-03
103GO:0071555: cell wall organization7.02E-03
104GO:0006790: sulfur compound metabolic process7.51E-03
105GO:0006855: drug transmembrane transport7.74E-03
106GO:0010102: lateral root morphogenesis8.22E-03
107GO:0006108: malate metabolic process8.22E-03
108GO:0046274: lignin catabolic process8.22E-03
109GO:0009725: response to hormone8.22E-03
110GO:0006094: gluconeogenesis8.22E-03
111GO:0009611: response to wounding8.45E-03
112GO:0009809: lignin biosynthetic process8.94E-03
113GO:0009266: response to temperature stimulus8.94E-03
114GO:0051603: proteolysis involved in cellular protein catabolic process9.26E-03
115GO:0006857: oligopeptide transport9.58E-03
116GO:0019853: L-ascorbic acid biosynthetic process9.69E-03
117GO:0010039: response to iron ion9.69E-03
118GO:0046854: phosphatidylinositol phosphorylation9.69E-03
119GO:0006636: unsaturated fatty acid biosynthetic process1.05E-02
120GO:0019762: glucosinolate catabolic process1.05E-02
121GO:0006096: glycolytic process1.06E-02
122GO:0048316: seed development1.09E-02
123GO:0009626: plant-type hypersensitive response1.13E-02
124GO:0003333: amino acid transmembrane transport1.29E-02
125GO:0016226: iron-sulfur cluster assembly1.37E-02
126GO:0035428: hexose transmembrane transport1.37E-02
127GO:0019748: secondary metabolic process1.37E-02
128GO:0016042: lipid catabolic process1.46E-02
129GO:0006817: phosphate ion transport1.55E-02
130GO:0019722: calcium-mediated signaling1.55E-02
131GO:0042631: cellular response to water deprivation1.74E-02
132GO:0010118: stomatal movement1.74E-02
133GO:0048653: anther development1.74E-02
134GO:0042744: hydrogen peroxide catabolic process1.82E-02
135GO:0009958: positive gravitropism1.83E-02
136GO:0010154: fruit development1.83E-02
137GO:0046323: glucose import1.83E-02
138GO:0008654: phospholipid biosynthetic process2.02E-02
139GO:0055072: iron ion homeostasis2.02E-02
140GO:0000302: response to reactive oxygen species2.12E-02
141GO:0009414: response to water deprivation2.28E-02
142GO:0030163: protein catabolic process2.33E-02
143GO:0071281: cellular response to iron ion2.33E-02
144GO:0010252: auxin homeostasis2.44E-02
145GO:0071805: potassium ion transmembrane transport2.54E-02
146GO:0042128: nitrate assimilation2.99E-02
147GO:0016311: dephosphorylation3.22E-02
148GO:0008219: cell death3.34E-02
149GO:0009813: flavonoid biosynthetic process3.46E-02
150GO:0048767: root hair elongation3.46E-02
151GO:0006811: ion transport3.58E-02
152GO:0010218: response to far red light3.58E-02
153GO:0007568: aging3.70E-02
154GO:0009723: response to ethylene3.95E-02
155GO:0055085: transmembrane transport4.17E-02
156GO:0080167: response to karrikin4.23E-02
157GO:0009640: photomorphogenesis4.73E-02
158GO:0010114: response to red light4.73E-02
RankGO TermAdjusted P value
1GO:0047782: coniferin beta-glucosidase activity0.00E+00
2GO:0009045: xylose isomerase activity0.00E+00
3GO:0032441: pheophorbide a oxygenase activity0.00E+00
4GO:0046316: gluconokinase activity0.00E+00
5GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity0.00E+00
6GO:0010176: homogentisate phytyltransferase activity0.00E+00
7GO:0003796: lysozyme activity0.00E+00
8GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity0.00E+00
9GO:0033961: cis-stilbene-oxide hydrolase activity0.00E+00
10GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity0.00E+00
11GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
12GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
13GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
14GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity0.00E+00
15GO:0005507: copper ion binding6.27E-06
16GO:0016788: hydrolase activity, acting on ester bonds3.30E-05
17GO:0004867: serine-type endopeptidase inhibitor activity3.81E-05
18GO:0008177: succinate dehydrogenase (ubiquinone) activity5.37E-05
19GO:0008422: beta-glucosidase activity7.23E-05
20GO:0001530: lipopolysaccharide binding2.16E-04
21GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity2.16E-04
22GO:0080047: GDP-L-galactose phosphorylase activity2.16E-04
23GO:0016780: phosphotransferase activity, for other substituted phosphate groups2.16E-04
24GO:0070401: NADP+ binding2.16E-04
25GO:0045437: uridine nucleosidase activity2.16E-04
26GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity2.16E-04
27GO:0004307: ethanolaminephosphotransferase activity2.16E-04
28GO:0009671: nitrate:proton symporter activity2.16E-04
29GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor2.16E-04
30GO:0090448: glucosinolate:proton symporter activity2.16E-04
31GO:0016229: steroid dehydrogenase activity2.16E-04
32GO:0080048: GDP-D-glucose phosphorylase activity2.16E-04
33GO:0004347: glucose-6-phosphate isomerase activity2.16E-04
34GO:0102483: scopolin beta-glucosidase activity4.21E-04
35GO:0020037: heme binding4.45E-04
36GO:0052689: carboxylic ester hydrolase activity4.48E-04
37GO:0047517: 1,4-beta-D-xylan synthase activity4.81E-04
38GO:0030572: phosphatidyltransferase activity4.81E-04
39GO:0004142: diacylglycerol cholinephosphotransferase activity4.81E-04
40GO:0051980: iron-nicotianamine transmembrane transporter activity4.81E-04
41GO:0005366: myo-inositol:proton symporter activity4.81E-04
42GO:0080109: indole-3-acetonitrile nitrile hydratase activity4.81E-04
43GO:0008517: folic acid transporter activity4.81E-04
44GO:0004566: beta-glucuronidase activity4.81E-04
45GO:0015179: L-amino acid transmembrane transporter activity4.81E-04
46GO:0004617: phosphoglycerate dehydrogenase activity4.81E-04
47GO:0004047: aminomethyltransferase activity4.81E-04
48GO:0047724: inosine nucleosidase activity4.81E-04
49GO:0010277: chlorophyllide a oxygenase [overall] activity7.83E-04
50GO:0004557: alpha-galactosidase activity7.83E-04
51GO:0080061: indole-3-acetonitrile nitrilase activity7.83E-04
52GO:0052692: raffinose alpha-galactosidase activity7.83E-04
53GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity7.83E-04
54GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds8.60E-04
55GO:0000257: nitrilase activity1.12E-03
56GO:0019201: nucleotide kinase activity1.12E-03
57GO:0004449: isocitrate dehydrogenase (NAD+) activity1.12E-03
58GO:0015203: polyamine transmembrane transporter activity1.12E-03
59GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.12E-03
60GO:0017089: glycolipid transporter activity1.12E-03
61GO:0015186: L-glutamine transmembrane transporter activity1.12E-03
62GO:0051287: NAD binding1.13E-03
63GO:0016760: cellulose synthase (UDP-forming) activity1.29E-03
64GO:0008234: cysteine-type peptidase activity1.46E-03
65GO:0080032: methyl jasmonate esterase activity1.48E-03
66GO:0009044: xylan 1,4-beta-xylosidase activity1.48E-03
67GO:0050302: indole-3-acetaldehyde oxidase activity1.48E-03
68GO:0005253: anion channel activity1.48E-03
69GO:0004301: epoxide hydrolase activity1.48E-03
70GO:0004659: prenyltransferase activity1.48E-03
71GO:0051861: glycolipid binding1.48E-03
72GO:0030551: cyclic nucleotide binding1.63E-03
73GO:0005199: structural constituent of cell wall1.76E-03
74GO:0000104: succinate dehydrogenase activity1.89E-03
75GO:0051538: 3 iron, 4 sulfur cluster binding1.89E-03
76GO:0004356: glutamate-ammonia ligase activity1.89E-03
77GO:0004197: cysteine-type endopeptidase activity2.31E-03
78GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity2.33E-03
79GO:0004462: lactoylglutathione lyase activity2.33E-03
80GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity2.33E-03
81GO:0016615: malate dehydrogenase activity2.33E-03
82GO:0008200: ion channel inhibitor activity2.33E-03
83GO:0005247: voltage-gated chloride channel activity2.33E-03
84GO:0080046: quercetin 4'-O-glucosyltransferase activity2.33E-03
85GO:0080030: methyl indole-3-acetate esterase activity2.33E-03
86GO:0016759: cellulose synthase activity2.62E-03
87GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.80E-03
88GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.80E-03
89GO:0004017: adenylate kinase activity2.80E-03
90GO:0030060: L-malate dehydrogenase activity2.80E-03
91GO:0005261: cation channel activity2.80E-03
92GO:0004723: calcium-dependent protein serine/threonine phosphatase activity2.80E-03
93GO:0005242: inward rectifier potassium channel activity2.80E-03
94GO:0030170: pyridoxal phosphate binding3.05E-03
95GO:0051213: dioxygenase activity3.12E-03
96GO:0005085: guanyl-nucleotide exchange factor activity3.30E-03
97GO:0019825: oxygen binding3.80E-03
98GO:0009055: electron carrier activity3.81E-03
99GO:0004033: aldo-keto reductase (NADP) activity3.82E-03
100GO:0004869: cysteine-type endopeptidase inhibitor activity3.82E-03
101GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity4.95E-03
102GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors5.14E-03
103GO:0005381: iron ion transmembrane transporter activity5.56E-03
104GO:0015174: basic amino acid transmembrane transporter activity5.56E-03
105GO:0005384: manganese ion transmembrane transporter activity5.56E-03
106GO:0016844: strictosidine synthase activity5.56E-03
107GO:0004568: chitinase activity6.18E-03
108GO:0004364: glutathione transferase activity6.37E-03
109GO:0005506: iron ion binding6.83E-03
110GO:0008794: arsenate reductase (glutaredoxin) activity6.84E-03
111GO:0008559: xenobiotic-transporting ATPase activity6.84E-03
112GO:0051537: 2 iron, 2 sulfur cluster binding7.17E-03
113GO:0052716: hydroquinone:oxygen oxidoreductase activity7.51E-03
114GO:0015198: oligopeptide transporter activity7.51E-03
115GO:0004022: alcohol dehydrogenase (NAD) activity8.22E-03
116GO:0042973: glucan endo-1,3-beta-D-glucosidase activity8.94E-03
117GO:0016298: lipase activity9.26E-03
118GO:0008061: chitin binding9.69E-03
119GO:0004190: aspartic-type endopeptidase activity9.69E-03
120GO:0030552: cAMP binding9.69E-03
121GO:0030553: cGMP binding9.69E-03
122GO:0004725: protein tyrosine phosphatase activity1.05E-02
123GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.09E-02
124GO:0016740: transferase activity1.11E-02
125GO:0008134: transcription factor binding1.12E-02
126GO:0051536: iron-sulfur cluster binding1.12E-02
127GO:0016491: oxidoreductase activity1.13E-02
128GO:0005216: ion channel activity1.21E-02
129GO:0008324: cation transmembrane transporter activity1.21E-02
130GO:0035251: UDP-glucosyltransferase activity1.29E-02
131GO:0004540: ribonuclease activity1.29E-02
132GO:0005249: voltage-gated potassium channel activity1.74E-02
133GO:0004252: serine-type endopeptidase activity1.78E-02
134GO:0005355: glucose transmembrane transporter activity1.93E-02
135GO:0015297: antiporter activity2.11E-02
136GO:0016791: phosphatase activity2.44E-02
137GO:0008483: transaminase activity2.54E-02
138GO:0016722: oxidoreductase activity, oxidizing metal ions2.54E-02
139GO:0046872: metal ion binding2.56E-02
140GO:0016597: amino acid binding2.65E-02
141GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.81E-02
142GO:0042802: identical protein binding2.81E-02
143GO:0004721: phosphoprotein phosphatase activity3.10E-02
144GO:0016798: hydrolase activity, acting on glycosyl bonds3.10E-02
145GO:0004601: peroxidase activity3.42E-02
146GO:0015238: drug transmembrane transporter activity3.46E-02
147GO:0030145: manganese ion binding3.70E-02
148GO:0004497: monooxygenase activity4.23E-02
149GO:0051539: 4 iron, 4 sulfur cluster binding4.33E-02
150GO:0050661: NADP binding4.33E-02
151GO:0004185: serine-type carboxypeptidase activity4.73E-02
RankGO TermAdjusted P value
1GO:0005576: extracellular region9.45E-08
2GO:0005773: vacuole1.28E-06
3GO:0010168: ER body7.90E-05
4GO:0005759: mitochondrial matrix8.38E-05
5GO:0005615: extracellular space1.30E-04
6GO:0045281: succinate dehydrogenase complex4.81E-04
7GO:0005618: cell wall4.94E-04
8GO:0000325: plant-type vacuole5.77E-04
9GO:0005578: proteinaceous extracellular matrix5.83E-04
10GO:0005764: lysosome6.57E-04
11GO:0009530: primary cell wall7.83E-04
12GO:0045271: respiratory chain complex I9.92E-04
13GO:0048046: apoplast1.14E-03
14GO:0031966: mitochondrial membrane1.18E-03
15GO:0055035: plastid thylakoid membrane1.89E-03
16GO:0034707: chloride channel complex2.33E-03
17GO:0005774: vacuolar membrane2.93E-03
18GO:0005886: plasma membrane3.15E-03
19GO:0045273: respiratory chain complex II3.82E-03
20GO:0009705: plant-type vacuole membrane4.02E-03
21GO:0010494: cytoplasmic stress granule4.95E-03
22GO:0005765: lysosomal membrane6.84E-03
23GO:0031012: extracellular matrix8.22E-03
24GO:0005753: mitochondrial proton-transporting ATP synthase complex9.69E-03
25GO:0005777: peroxisome1.01E-02
26GO:0005747: mitochondrial respiratory chain complex I1.09E-02
27GO:0005783: endoplasmic reticulum1.50E-02
28GO:0005829: cytosol1.74E-02
29GO:0005887: integral component of plasma membrane2.23E-02
30GO:0016020: membrane2.32E-02
31GO:0000932: P-body2.76E-02
32GO:0009707: chloroplast outer membrane3.34E-02
33GO:0031969: chloroplast membrane4.23E-02
34GO:0090406: pollen tube4.73E-02
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Gene type



Gene DE type