GO Enrichment Analysis of Co-expressed Genes with
AT1G73170
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 2 | GO:0042371: vitamin K biosynthetic process | 0.00E+00 |
| 3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 4 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 5 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 6 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 7 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 8 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 9 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 10 | GO:0048564: photosystem I assembly | 7.70E-05 |
| 11 | GO:0009657: plastid organization | 9.69E-05 |
| 12 | GO:0015979: photosynthesis | 9.86E-05 |
| 13 | GO:0031426: polycistronic mRNA processing | 1.22E-04 |
| 14 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.22E-04 |
| 15 | GO:1904964: positive regulation of phytol biosynthetic process | 1.22E-04 |
| 16 | GO:0010028: xanthophyll cycle | 1.22E-04 |
| 17 | GO:0006419: alanyl-tRNA aminoacylation | 1.22E-04 |
| 18 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.22E-04 |
| 19 | GO:0009793: embryo development ending in seed dormancy | 1.39E-04 |
| 20 | GO:0006094: gluconeogenesis | 2.65E-04 |
| 21 | GO:0080005: photosystem stoichiometry adjustment | 2.82E-04 |
| 22 | GO:0006432: phenylalanyl-tRNA aminoacylation | 2.82E-04 |
| 23 | GO:0000256: allantoin catabolic process | 2.82E-04 |
| 24 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.82E-04 |
| 25 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.82E-04 |
| 26 | GO:0009629: response to gravity | 2.82E-04 |
| 27 | GO:0010136: ureide catabolic process | 4.65E-04 |
| 28 | GO:0005977: glycogen metabolic process | 4.65E-04 |
| 29 | GO:0006013: mannose metabolic process | 4.65E-04 |
| 30 | GO:0009226: nucleotide-sugar biosynthetic process | 6.66E-04 |
| 31 | GO:2001141: regulation of RNA biosynthetic process | 6.66E-04 |
| 32 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 6.66E-04 |
| 33 | GO:0010239: chloroplast mRNA processing | 6.66E-04 |
| 34 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 6.66E-04 |
| 35 | GO:0006145: purine nucleobase catabolic process | 6.66E-04 |
| 36 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 6.66E-04 |
| 37 | GO:0006021: inositol biosynthetic process | 8.84E-04 |
| 38 | GO:0010021: amylopectin biosynthetic process | 8.84E-04 |
| 39 | GO:0051781: positive regulation of cell division | 8.84E-04 |
| 40 | GO:0009765: photosynthesis, light harvesting | 8.84E-04 |
| 41 | GO:0016558: protein import into peroxisome matrix | 1.12E-03 |
| 42 | GO:0010236: plastoquinone biosynthetic process | 1.12E-03 |
| 43 | GO:0016123: xanthophyll biosynthetic process | 1.12E-03 |
| 44 | GO:0016120: carotene biosynthetic process | 1.12E-03 |
| 45 | GO:0042549: photosystem II stabilization | 1.37E-03 |
| 46 | GO:0046855: inositol phosphate dephosphorylation | 1.37E-03 |
| 47 | GO:0009451: RNA modification | 1.50E-03 |
| 48 | GO:0042372: phylloquinone biosynthetic process | 1.64E-03 |
| 49 | GO:0015995: chlorophyll biosynthetic process | 1.67E-03 |
| 50 | GO:0018298: protein-chromophore linkage | 1.84E-03 |
| 51 | GO:0009645: response to low light intensity stimulus | 1.92E-03 |
| 52 | GO:0006400: tRNA modification | 1.92E-03 |
| 53 | GO:0009772: photosynthetic electron transport in photosystem II | 1.92E-03 |
| 54 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.22E-03 |
| 55 | GO:0017004: cytochrome complex assembly | 2.54E-03 |
| 56 | GO:0071482: cellular response to light stimulus | 2.54E-03 |
| 57 | GO:0006754: ATP biosynthetic process | 2.87E-03 |
| 58 | GO:0098656: anion transmembrane transport | 2.87E-03 |
| 59 | GO:0006098: pentose-phosphate shunt | 2.87E-03 |
| 60 | GO:0048507: meristem development | 2.87E-03 |
| 61 | GO:0010114: response to red light | 2.99E-03 |
| 62 | GO:0005982: starch metabolic process | 3.21E-03 |
| 63 | GO:0080167: response to karrikin | 3.32E-03 |
| 64 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 3.57E-03 |
| 65 | GO:0006259: DNA metabolic process | 3.57E-03 |
| 66 | GO:0006265: DNA topological change | 3.94E-03 |
| 67 | GO:0006352: DNA-templated transcription, initiation | 3.94E-03 |
| 68 | GO:0006415: translational termination | 3.94E-03 |
| 69 | GO:0010224: response to UV-B | 4.16E-03 |
| 70 | GO:0006790: sulfur compound metabolic process | 4.32E-03 |
| 71 | GO:2000012: regulation of auxin polar transport | 4.71E-03 |
| 72 | GO:0006096: glycolytic process | 4.74E-03 |
| 73 | GO:0010207: photosystem II assembly | 5.12E-03 |
| 74 | GO:0019853: L-ascorbic acid biosynthetic process | 5.54E-03 |
| 75 | GO:0046854: phosphatidylinositol phosphorylation | 5.54E-03 |
| 76 | GO:0006396: RNA processing | 5.87E-03 |
| 77 | GO:0006833: water transport | 5.98E-03 |
| 78 | GO:0080147: root hair cell development | 6.42E-03 |
| 79 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.87E-03 |
| 80 | GO:0007017: microtubule-based process | 6.87E-03 |
| 81 | GO:0048511: rhythmic process | 7.34E-03 |
| 82 | GO:0080092: regulation of pollen tube growth | 7.81E-03 |
| 83 | GO:0006413: translational initiation | 9.19E-03 |
| 84 | GO:0016117: carotenoid biosynthetic process | 9.31E-03 |
| 85 | GO:0034220: ion transmembrane transport | 9.83E-03 |
| 86 | GO:0000413: protein peptidyl-prolyl isomerization | 9.83E-03 |
| 87 | GO:0048868: pollen tube development | 1.04E-02 |
| 88 | GO:0042752: regulation of circadian rhythm | 1.09E-02 |
| 89 | GO:0007059: chromosome segregation | 1.09E-02 |
| 90 | GO:0007166: cell surface receptor signaling pathway | 1.13E-02 |
| 91 | GO:0019252: starch biosynthetic process | 1.15E-02 |
| 92 | GO:0009791: post-embryonic development | 1.15E-02 |
| 93 | GO:0010468: regulation of gene expression | 1.18E-02 |
| 94 | GO:0006635: fatty acid beta-oxidation | 1.20E-02 |
| 95 | GO:0010193: response to ozone | 1.20E-02 |
| 96 | GO:0016032: viral process | 1.26E-02 |
| 97 | GO:0010583: response to cyclopentenone | 1.26E-02 |
| 98 | GO:0009658: chloroplast organization | 1.53E-02 |
| 99 | GO:0055085: transmembrane transport | 1.53E-02 |
| 100 | GO:0001666: response to hypoxia | 1.56E-02 |
| 101 | GO:0009911: positive regulation of flower development | 1.56E-02 |
| 102 | GO:0006457: protein folding | 1.57E-02 |
| 103 | GO:0042128: nitrate assimilation | 1.69E-02 |
| 104 | GO:0010411: xyloglucan metabolic process | 1.75E-02 |
| 105 | GO:0009817: defense response to fungus, incompatible interaction | 1.88E-02 |
| 106 | GO:0009813: flavonoid biosynthetic process | 1.95E-02 |
| 107 | GO:0007568: aging | 2.09E-02 |
| 108 | GO:0009637: response to blue light | 2.23E-02 |
| 109 | GO:0009926: auxin polar transport | 2.67E-02 |
| 110 | GO:0042546: cell wall biogenesis | 2.75E-02 |
| 111 | GO:0009644: response to high light intensity | 2.82E-02 |
| 112 | GO:0006364: rRNA processing | 3.30E-02 |
| 113 | GO:0006417: regulation of translation | 3.55E-02 |
| 114 | GO:0048316: seed development | 3.80E-02 |
| 115 | GO:0009553: embryo sac development | 4.15E-02 |
| 116 | GO:0006810: transport | 4.41E-02 |
| 117 | GO:0005975: carbohydrate metabolic process | 4.59E-02 |
| 118 | GO:0009555: pollen development | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 2 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 3 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 4 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 5 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 6 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 7 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 8 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 9 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 10 | GO:0042623: ATPase activity, coupled | 0.00E+00 |
| 11 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 12 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.22E-04 |
| 13 | GO:0004347: glucose-6-phosphate isomerase activity | 1.22E-04 |
| 14 | GO:0004813: alanine-tRNA ligase activity | 1.22E-04 |
| 15 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.00E-04 |
| 16 | GO:0000049: tRNA binding | 2.32E-04 |
| 17 | GO:0019156: isoamylase activity | 2.82E-04 |
| 18 | GO:0052832: inositol monophosphate 3-phosphatase activity | 2.82E-04 |
| 19 | GO:0008934: inositol monophosphate 1-phosphatase activity | 2.82E-04 |
| 20 | GO:0052833: inositol monophosphate 4-phosphatase activity | 2.82E-04 |
| 21 | GO:0004826: phenylalanine-tRNA ligase activity | 2.82E-04 |
| 22 | GO:0004751: ribose-5-phosphate isomerase activity | 4.65E-04 |
| 23 | GO:0070402: NADPH binding | 4.65E-04 |
| 24 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.65E-04 |
| 25 | GO:0016149: translation release factor activity, codon specific | 6.66E-04 |
| 26 | GO:0048027: mRNA 5'-UTR binding | 6.66E-04 |
| 27 | GO:0016851: magnesium chelatase activity | 6.66E-04 |
| 28 | GO:0004659: prenyltransferase activity | 8.84E-04 |
| 29 | GO:0001053: plastid sigma factor activity | 8.84E-04 |
| 30 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 8.84E-04 |
| 31 | GO:0016987: sigma factor activity | 8.84E-04 |
| 32 | GO:0043495: protein anchor | 8.84E-04 |
| 33 | GO:0004556: alpha-amylase activity | 1.37E-03 |
| 34 | GO:0004332: fructose-bisphosphate aldolase activity | 1.37E-03 |
| 35 | GO:0016168: chlorophyll binding | 1.50E-03 |
| 36 | GO:0004559: alpha-mannosidase activity | 1.64E-03 |
| 37 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.64E-03 |
| 38 | GO:0019899: enzyme binding | 1.92E-03 |
| 39 | GO:0004033: aldo-keto reductase (NADP) activity | 2.22E-03 |
| 40 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.54E-03 |
| 41 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 2.87E-03 |
| 42 | GO:0003747: translation release factor activity | 2.87E-03 |
| 43 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.48E-03 |
| 44 | GO:0008081: phosphoric diester hydrolase activity | 4.71E-03 |
| 45 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.71E-03 |
| 46 | GO:0004565: beta-galactosidase activity | 4.71E-03 |
| 47 | GO:0031409: pigment binding | 5.98E-03 |
| 48 | GO:0004519: endonuclease activity | 6.05E-03 |
| 49 | GO:0043424: protein histidine kinase binding | 6.87E-03 |
| 50 | GO:0004176: ATP-dependent peptidase activity | 7.34E-03 |
| 51 | GO:0022891: substrate-specific transmembrane transporter activity | 8.30E-03 |
| 52 | GO:0003727: single-stranded RNA binding | 8.80E-03 |
| 53 | GO:0008514: organic anion transmembrane transporter activity | 8.80E-03 |
| 54 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 9.19E-03 |
| 55 | GO:0016887: ATPase activity | 9.49E-03 |
| 56 | GO:0008080: N-acetyltransferase activity | 1.04E-02 |
| 57 | GO:0003743: translation initiation factor activity | 1.15E-02 |
| 58 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.20E-02 |
| 59 | GO:0048038: quinone binding | 1.20E-02 |
| 60 | GO:0016597: amino acid binding | 1.50E-02 |
| 61 | GO:0015250: water channel activity | 1.56E-02 |
| 62 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.75E-02 |
| 63 | GO:0050897: cobalt ion binding | 2.09E-02 |
| 64 | GO:0003723: RNA binding | 2.24E-02 |
| 65 | GO:0005524: ATP binding | 2.50E-02 |
| 66 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.82E-02 |
| 67 | GO:0043621: protein self-association | 2.82E-02 |
| 68 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.30E-02 |
| 69 | GO:0003777: microtubule motor activity | 3.55E-02 |
| 70 | GO:0031625: ubiquitin protein ligase binding | 3.55E-02 |
| 71 | GO:0016491: oxidoreductase activity | 3.86E-02 |
| 72 | GO:0004650: polygalacturonase activity | 3.98E-02 |
| 73 | GO:0008026: ATP-dependent helicase activity | 4.42E-02 |
| 74 | GO:0019843: rRNA binding | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 9.94E-22 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.29E-12 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 1.06E-08 |
| 5 | GO:0009534: chloroplast thylakoid | 1.62E-05 |
| 6 | GO:0009570: chloroplast stroma | 4.45E-05 |
| 7 | GO:0009941: chloroplast envelope | 5.95E-05 |
| 8 | GO:0009782: photosystem I antenna complex | 1.22E-04 |
| 9 | GO:0031977: thylakoid lumen | 2.90E-04 |
| 10 | GO:0030095: chloroplast photosystem II | 3.00E-04 |
| 11 | GO:0009654: photosystem II oxygen evolving complex | 4.61E-04 |
| 12 | GO:0010007: magnesium chelatase complex | 4.65E-04 |
| 13 | GO:0030286: dynein complex | 8.84E-04 |
| 14 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 8.84E-04 |
| 15 | GO:0009523: photosystem II | 9.36E-04 |
| 16 | GO:0019898: extrinsic component of membrane | 9.36E-04 |
| 17 | GO:0009533: chloroplast stromal thylakoid | 1.92E-03 |
| 18 | GO:0042644: chloroplast nucleoid | 2.87E-03 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.87E-03 |
| 20 | GO:0009579: thylakoid | 3.15E-03 |
| 21 | GO:0031969: chloroplast membrane | 3.32E-03 |
| 22 | GO:0016324: apical plasma membrane | 3.57E-03 |
| 23 | GO:0090404: pollen tube tip | 3.94E-03 |
| 24 | GO:0030076: light-harvesting complex | 5.54E-03 |
| 25 | GO:0009706: chloroplast inner membrane | 5.71E-03 |
| 26 | GO:0042651: thylakoid membrane | 6.87E-03 |
| 27 | GO:0005759: mitochondrial matrix | 8.97E-03 |
| 28 | GO:0005778: peroxisomal membrane | 1.44E-02 |
| 29 | GO:0009295: nucleoid | 1.44E-02 |
| 30 | GO:0009505: plant-type cell wall | 3.63E-02 |
| 31 | GO:0005747: mitochondrial respiratory chain complex I | 3.80E-02 |
| 32 | GO:0048046: apoplast | 4.76E-02 |
| 33 | GO:0010287: plastoglobule | 4.79E-02 |