co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G73060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0016553: base conversion or substitution editing	0.00E+00
2	GO:0015717: triose phosphate transport	0.00E+00
3	GO:0019323: pentose catabolic process	0.00E+00
4	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
5	GO:0015979: photosynthesis	3.75E-06
6	GO:0009409: response to cold	9.45E-06
7	GO:0043489: RNA stabilization	1.39E-05
8	GO:0044262: cellular carbohydrate metabolic process	1.39E-05
9	GO:0009735: response to cytokinin	1.76E-05
10	GO:0018026: peptidyl-lysine monomethylation	3.65E-05
11	GO:0030388: fructose 1,6-bisphosphate metabolic process	3.65E-05
12	GO:0019252: starch biosynthetic process	5.23E-05
13	GO:0035436: triose phosphate transmembrane transport	6.55E-05
14	GO:0006000: fructose metabolic process	6.55E-05
15	GO:0009052: pentose-phosphate shunt, non-oxidative branch	9.94E-05
16	GO:0010731: protein glutathionylation	9.94E-05
17	GO:2000122: negative regulation of stomatal complex development	1.37E-04
18	GO:0010021: amylopectin biosynthetic process	1.37E-04
19	GO:0010037: response to carbon dioxide	1.37E-04
20	GO:0015976: carbon utilization	1.37E-04
21	GO:0009765: photosynthesis, light harvesting	1.37E-04
22	GO:0015713: phosphoglycerate transport	1.37E-04
23	GO:0009643: photosynthetic acclimation	2.22E-04
24	GO:0009955: adaxial/abaxial pattern specification	2.68E-04
25	GO:1901259: chloroplast rRNA processing	2.68E-04
26	GO:0009645: response to low light intensity stimulus	3.15E-04
27	GO:0005978: glycogen biosynthetic process	3.65E-04
28	GO:0032544: plastid translation	4.16E-04
29	GO:0006002: fructose 6-phosphate metabolic process	4.16E-04
30	GO:0009750: response to fructose	6.34E-04
31	GO:0009773: photosynthetic electron transport in photosystem I	6.34E-04
32	GO:0005983: starch catabolic process	6.93E-04
33	GO:0006094: gluconeogenesis	7.52E-04
34	GO:0005986: sucrose biosynthetic process	7.52E-04
35	GO:0009768: photosynthesis, light harvesting in photosystem I	1.07E-03
36	GO:0015986: ATP synthesis coupled proton transport	1.64E-03
37	GO:0000302: response to reactive oxygen species	1.80E-03
38	GO:0016311: dephosphorylation	2.66E-03
39	GO:0018298: protein-chromophore linkage	2.75E-03
40	GO:0009817: defense response to fungus, incompatible interaction	2.75E-03
41	GO:0010218: response to far red light	2.94E-03
42	GO:0010119: regulation of stomatal movement	3.03E-03
43	GO:0009631: cold acclimation	3.03E-03
44	GO:0045087: innate immune response	3.22E-03
45	GO:0009637: response to blue light	3.22E-03
46	GO:0034599: cellular response to oxidative stress	3.32E-03
47	GO:0010114: response to red light	3.83E-03
48	GO:0009644: response to high light intensity	4.04E-03
49	GO:0009624: response to nematode	5.98E-03
50	GO:0006396: RNA processing	6.10E-03
51	GO:0042742: defense response to bacterium	6.16E-03
52	GO:0042744: hydrogen peroxide catabolic process	7.64E-03
53	GO:0007623: circadian rhythm	8.74E-03
54	GO:0009451: RNA modification	8.88E-03
55	GO:0042254: ribosome biogenesis	1.20E-02
56	GO:0009737: response to abscisic acid	1.31E-02
57	GO:0006397: mRNA processing	1.88E-02
58	GO:0006412: translation	3.23E-02
59	GO:0006979: response to oxidative stress	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	1.39E-05
2	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.39E-05
3	GO:0033201: alpha-1,4-glucan synthase activity	3.65E-05
4	GO:0004750: ribulose-phosphate 3-epimerase activity	3.65E-05
5	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	3.65E-05
6	GO:0008967: phosphoglycolate phosphatase activity	3.65E-05
7	GO:0045174: glutathione dehydrogenase (ascorbate) activity	6.55E-05
8	GO:0071917: triose-phosphate transmembrane transporter activity	6.55E-05
9	GO:0004373: glycogen (starch) synthase activity	6.55E-05
10	GO:0009011: starch synthase activity	1.37E-04
11	GO:0008878: glucose-1-phosphate adenylyltransferase activity	1.37E-04
12	GO:0015120: phosphoglycerate transmembrane transporter activity	1.37E-04
13	GO:0016279: protein-lysine N-methyltransferase activity	1.37E-04
14	GO:0004130: cytochrome-c peroxidase activity	2.22E-04
15	GO:0004602: glutathione peroxidase activity	2.68E-04
16	GO:0015078: hydrogen ion transmembrane transporter activity	4.16E-04
17	GO:0019843: rRNA binding	4.75E-04
18	GO:0004089: carbonate dehydratase activity	7.52E-04
19	GO:0008266: poly(U) RNA binding	8.13E-04
20	GO:0031409: pigment binding	9.38E-04
21	GO:0005528: FK506 binding	1.00E-03
22	GO:0048038: quinone binding	1.80E-03
23	GO:0016168: chlorophyll binding	2.39E-03
24	GO:0004364: glutathione transferase activity	3.73E-03
25	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.26E-03
26	GO:0015297: antiporter activity	8.46E-03
27	GO:0004601: peroxidase activity	1.19E-02
28	GO:0003735: structural constituent of ribosome	1.23E-02
29	GO:0016787: hydrolase activity	1.32E-02
30	GO:0003723: RNA binding	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0098572: stromal side of plastid thylakoid membrane	0.00E+00
2	GO:0009535: chloroplast thylakoid membrane	1.35E-21
3	GO:0009507: chloroplast	4.27E-21
4	GO:0009941: chloroplast envelope	4.46E-21
5	GO:0009534: chloroplast thylakoid	2.06E-19
6	GO:0009579: thylakoid	2.10E-17
7	GO:0009570: chloroplast stroma	1.84E-16
8	GO:0009508: plastid chromosome	1.08E-05
9	GO:0010287: plastoglobule	1.73E-05
10	GO:0009543: chloroplast thylakoid lumen	1.89E-05
11	GO:0030093: chloroplast photosystem I	3.65E-05
12	GO:0010319: stromule	7.58E-05
13	GO:0009295: nucleoid	7.58E-05
14	GO:0031977: thylakoid lumen	1.81E-04
15	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	2.22E-04
16	GO:0009501: amyloplast	3.65E-04
17	GO:0009538: photosystem I reaction center	3.65E-04
18	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.68E-04
19	GO:0005763: mitochondrial small ribosomal subunit	4.68E-04
20	GO:0042644: chloroplast nucleoid	4.68E-04
21	GO:0030076: light-harvesting complex	8.75E-04
22	GO:0015935: small ribosomal subunit	1.13E-03
23	GO:0009522: photosystem I	1.64E-03
24	GO:0009523: photosystem II	1.72E-03
25	GO:0030529: intracellular ribonucleoprotein complex	2.30E-03
26	GO:0016020: membrane	3.35E-03
27	GO:0009706: chloroplast inner membrane	5.98E-03
28	GO:0005840: ribosome	6.45E-03
29	GO:0031969: chloroplast membrane	1.38E-02
30	GO:0048046: apoplast	2.25E-02
31	GO:0005622: intracellular	4.13E-02