co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G72930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051776: detection of redox state	0.00E+00
2	GO:0046292: formaldehyde metabolic process	0.00E+00
3	GO:0046294: formaldehyde catabolic process	0.00E+00
4	GO:0009992: cellular water homeostasis	0.00E+00
5	GO:0019428: allantoin biosynthetic process	0.00E+00
6	GO:0010513: positive regulation of phosphatidylinositol biosynthetic process	0.00E+00
7	GO:0006721: terpenoid metabolic process	0.00E+00
8	GO:0006069: ethanol oxidation	0.00E+00
9	GO:0009236: cobalamin biosynthetic process	0.00E+00
10	GO:0006592: ornithine biosynthetic process	0.00E+00
11	GO:0046890: regulation of lipid biosynthetic process	0.00E+00
12	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
13	GO:1902290: positive regulation of defense response to oomycetes	8.70E-06
14	GO:0071446: cellular response to salicylic acid stimulus	7.52E-05
15	GO:1900150: regulation of defense response to fungus	9.72E-05
16	GO:0006526: arginine biosynthetic process	1.22E-04
17	GO:0019354: siroheme biosynthetic process	1.42E-04
18	GO:0019628: urate catabolic process	1.42E-04
19	GO:0016487: farnesol metabolic process	1.42E-04
20	GO:0006007: glucose catabolic process	1.42E-04
21	GO:0031468: nuclear envelope reassembly	1.42E-04
22	GO:0010265: SCF complex assembly	1.42E-04
23	GO:0006144: purine nucleobase metabolic process	1.42E-04
24	GO:0001560: regulation of cell growth by extracellular stimulus	1.42E-04
25	GO:0045454: cell redox homeostasis	1.68E-04
26	GO:0009751: response to salicylic acid	2.47E-04
27	GO:0071712: ER-associated misfolded protein catabolic process	3.25E-04
28	GO:0055088: lipid homeostasis	3.25E-04
29	GO:0016560: protein import into peroxisome matrix, docking	3.25E-04
30	GO:0006432: phenylalanyl-tRNA aminoacylation	3.25E-04
31	GO:0097054: L-glutamate biosynthetic process	3.25E-04
32	GO:2000082: regulation of L-ascorbic acid biosynthetic process	5.33E-04
33	GO:0006591: ornithine metabolic process	5.33E-04
34	GO:0046417: chorismate metabolic process	5.33E-04
35	GO:0015940: pantothenate biosynthetic process	5.33E-04
36	GO:0071492: cellular response to UV-A	5.33E-04
37	GO:0045793: positive regulation of cell size	5.33E-04
38	GO:0071494: cellular response to UV-C	5.33E-04
39	GO:0009311: oligosaccharide metabolic process	7.63E-04
40	GO:0006107: oxaloacetate metabolic process	7.63E-04
41	GO:0006241: CTP biosynthetic process	7.63E-04
42	GO:0006165: nucleoside diphosphate phosphorylation	7.63E-04
43	GO:0006228: UTP biosynthetic process	7.63E-04
44	GO:0006537: glutamate biosynthetic process	7.63E-04
45	GO:0051289: protein homotetramerization	7.63E-04
46	GO:0032877: positive regulation of DNA endoreduplication	7.63E-04
47	GO:0051781: positive regulation of cell division	1.01E-03
48	GO:0071486: cellular response to high light intensity	1.01E-03
49	GO:0009765: photosynthesis, light harvesting	1.01E-03
50	GO:0006183: GTP biosynthetic process	1.01E-03
51	GO:0006221: pyrimidine nucleotide biosynthetic process	1.01E-03
52	GO:0006625: protein targeting to peroxisome	1.01E-03
53	GO:0006749: glutathione metabolic process	1.01E-03
54	GO:0044205: 'de novo' UMP biosynthetic process	1.01E-03
55	GO:0010109: regulation of photosynthesis	1.01E-03
56	GO:0019676: ammonia assimilation cycle	1.01E-03
57	GO:0006796: phosphate-containing compound metabolic process	1.57E-03
58	GO:0006014: D-ribose metabolic process	1.57E-03
59	GO:0009615: response to virus	1.74E-03
60	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	2.21E-03
61	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.21E-03
62	GO:0008219: cell death	2.27E-03
63	GO:0009617: response to bacterium	2.38E-03
64	GO:0000028: ribosomal small subunit assembly	2.56E-03
65	GO:0009853: photorespiration	2.86E-03
66	GO:0010100: negative regulation of photomorphogenesis	2.93E-03
67	GO:2000031: regulation of salicylic acid mediated signaling pathway	2.93E-03
68	GO:0006099: tricarboxylic acid cycle	2.99E-03
69	GO:0034599: cellular response to oxidative stress	2.99E-03
70	GO:0046685: response to arsenic-containing substance	3.31E-03
71	GO:0009926: auxin polar transport	3.68E-03
72	GO:1900426: positive regulation of defense response to bacterium	3.71E-03
73	GO:0006535: cysteine biosynthetic process from serine	4.12E-03
74	GO:0072593: reactive oxygen species metabolic process	4.55E-03
75	GO:0009073: aromatic amino acid family biosynthetic process	4.55E-03
76	GO:0006807: nitrogen compound metabolic process	5.45E-03
77	GO:0006108: malate metabolic process	5.45E-03
78	GO:2000028: regulation of photoperiodism, flowering	5.45E-03
79	GO:0050826: response to freezing	5.45E-03
80	GO:0007031: peroxisome organization	6.41E-03
81	GO:0007030: Golgi organization	6.41E-03
82	GO:0009620: response to fungus	6.43E-03
83	GO:0034976: response to endoplasmic reticulum stress	6.91E-03
84	GO:0006071: glycerol metabolic process	6.91E-03
85	GO:0019344: cysteine biosynthetic process	7.42E-03
86	GO:0009863: salicylic acid mediated signaling pathway	7.42E-03
87	GO:0019915: lipid storage	8.49E-03
88	GO:0015992: proton transport	8.49E-03
89	GO:0016226: iron-sulfur cluster assembly	9.05E-03
90	GO:0006012: galactose metabolic process	9.62E-03
91	GO:0055114: oxidation-reduction process	1.11E-02
92	GO:0015991: ATP hydrolysis coupled proton transport	1.14E-02
93	GO:0042631: cellular response to water deprivation	1.14E-02
94	GO:0042391: regulation of membrane potential	1.14E-02
95	GO:0034220: ion transmembrane transport	1.14E-02
96	GO:0000413: protein peptidyl-prolyl isomerization	1.14E-02
97	GO:0010051: xylem and phloem pattern formation	1.14E-02
98	GO:0010118: stomatal movement	1.14E-02
99	GO:0006520: cellular amino acid metabolic process	1.20E-02
100	GO:0006662: glycerol ether metabolic process	1.20E-02
101	GO:0048868: pollen tube development	1.20E-02
102	GO:0007623: circadian rhythm	1.22E-02
103	GO:0015986: ATP synthesis coupled proton transport	1.26E-02
104	GO:0061025: membrane fusion	1.26E-02
105	GO:0010228: vegetative to reproductive phase transition of meristem	1.28E-02
106	GO:0007166: cell surface receptor signaling pathway	1.39E-02
107	GO:0009567: double fertilization forming a zygote and endosperm	1.60E-02
108	GO:0010286: heat acclimation	1.67E-02
109	GO:0000910: cytokinesis	1.74E-02
110	GO:0009826: unidimensional cell growth	1.82E-02
111	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.88E-02
112	GO:0009816: defense response to bacterium, incompatible interaction	1.88E-02
113	GO:0006974: cellular response to DNA damage stimulus	1.96E-02
114	GO:0009627: systemic acquired resistance	1.96E-02
115	GO:0009407: toxin catabolic process	2.34E-02
116	GO:0080167: response to karrikin	2.35E-02
117	GO:0045087: innate immune response	2.59E-02
118	GO:0042542: response to hydrogen peroxide	3.01E-02
119	GO:0051707: response to other organism	3.10E-02
120	GO:0016042: lipid catabolic process	3.36E-02
121	GO:0009636: response to toxic substance	3.37E-02
122	GO:0006281: DNA repair	3.46E-02
123	GO:0006629: lipid metabolic process	3.46E-02
124	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.55E-02
125	GO:0006979: response to oxidative stress	3.60E-02
126	GO:0016310: phosphorylation	3.67E-02
127	GO:0009585: red, far-red light phototransduction	3.83E-02
128	GO:0051603: proteolysis involved in cellular protein catabolic process	3.93E-02
129	GO:0006096: glycolytic process	4.32E-02
130	GO:0048316: seed development	4.42E-02
131	GO:0009626: plant-type hypersensitive response	4.52E-02
132	GO:0016569: covalent chromatin modification	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0004585: ornithine carbamoyltransferase activity	0.00E+00
2	GO:0050152: omega-amidase activity	0.00E+00
3	GO:0051266: sirohydrochlorin ferrochelatase activity	0.00E+00
4	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
5	GO:0004151: dihydroorotase activity	0.00E+00
6	GO:0015930: glutamate synthase activity	0.00E+00
7	GO:0018738: S-formylglutathione hydrolase activity	0.00E+00
8	GO:0047886: farnesol dehydrogenase activity	0.00E+00
9	GO:0008777: acetylornithine deacetylase activity	0.00E+00
10	GO:0016852: sirohydrochlorin cobaltochelatase activity	0.00E+00
11	GO:0033971: hydroxyisourate hydrolase activity	0.00E+00
12	GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	0.00E+00
13	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
14	GO:0030247: polysaccharide binding	9.58E-06
15	GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity	1.42E-04
16	GO:0030611: arsenate reductase activity	1.42E-04
17	GO:0016041: glutamate synthase (ferredoxin) activity	1.42E-04
18	GO:0008794: arsenate reductase (glutaredoxin) activity	2.49E-04
19	GO:0050897: cobalt ion binding	2.70E-04
20	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	3.25E-04
21	GO:0004826: phenylalanine-tRNA ligase activity	3.25E-04
22	GO:0016743: carboxyl- or carbamoyltransferase activity	3.25E-04
23	GO:1990585: hydroxyproline O-arabinosyltransferase activity	3.25E-04
24	GO:0004106: chorismate mutase activity	3.25E-04
25	GO:0044390: ubiquitin-like protein conjugating enzyme binding	3.25E-04
26	GO:0004089: carbonate dehydratase activity	3.27E-04
27	GO:0004557: alpha-galactosidase activity	5.33E-04
28	GO:0052692: raffinose alpha-galactosidase activity	5.33E-04
29	GO:0004550: nucleoside diphosphate kinase activity	7.63E-04
30	GO:0015035: protein disulfide oxidoreductase activity	9.96E-04
31	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	9.96E-04
32	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	1.01E-03
33	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.01E-03
34	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	1.01E-03
35	GO:0010011: auxin binding	1.01E-03
36	GO:0051538: 3 iron, 4 sulfur cluster binding	1.28E-03
37	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.38E-03
38	GO:0051117: ATPase binding	1.57E-03
39	GO:0004124: cysteine synthase activity	1.88E-03
40	GO:0004747: ribokinase activity	1.88E-03
41	GO:0005261: cation channel activity	1.88E-03
42	GO:0004602: glutathione peroxidase activity	1.88E-03
43	GO:0005509: calcium ion binding	2.14E-03
44	GO:0042162: telomeric DNA binding	2.21E-03
45	GO:0004427: inorganic diphosphatase activity	2.21E-03
46	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.21E-03
47	GO:0004034: aldose 1-epimerase activity	2.56E-03
48	GO:0035064: methylated histone binding	2.56E-03
49	GO:0008889: glycerophosphodiester phosphodiesterase activity	3.31E-03
50	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.31E-03
51	GO:0001055: RNA polymerase II activity	3.71E-03
52	GO:0008047: enzyme activator activity	4.12E-03
53	GO:0004129: cytochrome-c oxidase activity	4.55E-03
54	GO:0004521: endoribonuclease activity	4.99E-03
55	GO:0000049: tRNA binding	4.99E-03
56	GO:0004022: alcohol dehydrogenase (NAD) activity	5.45E-03
57	GO:0030553: cGMP binding	6.41E-03
58	GO:0003712: transcription cofactor activity	6.41E-03
59	GO:0030552: cAMP binding	6.41E-03
60	GO:0004725: protein tyrosine phosphatase activity	6.91E-03
61	GO:0043130: ubiquitin binding	7.42E-03
62	GO:0051536: iron-sulfur cluster binding	7.42E-03
63	GO:0005216: ion channel activity	7.95E-03
64	GO:0004298: threonine-type endopeptidase activity	8.49E-03
65	GO:0003756: protein disulfide isomerase activity	1.02E-02
66	GO:0005102: receptor binding	1.08E-02
67	GO:0047134: protein-disulfide reductase activity	1.08E-02
68	GO:0030551: cyclic nucleotide binding	1.14E-02
69	GO:0005249: voltage-gated potassium channel activity	1.14E-02
70	GO:0004791: thioredoxin-disulfide reductase activity	1.26E-02
71	GO:0016853: isomerase activity	1.26E-02
72	GO:0050662: coenzyme binding	1.26E-02
73	GO:0004872: receptor activity	1.33E-02
74	GO:0008237: metallopeptidase activity	1.67E-02
75	GO:0016597: amino acid binding	1.74E-02
76	GO:0046872: metal ion binding	1.81E-02
77	GO:0015250: water channel activity	1.81E-02
78	GO:0016168: chlorophyll binding	1.88E-02
79	GO:0016788: hydrolase activity, acting on ester bonds	1.93E-02
80	GO:0004806: triglyceride lipase activity	2.03E-02
81	GO:0030145: manganese ion binding	2.42E-02
82	GO:0003697: single-stranded DNA binding	2.59E-02
83	GO:0052689: carboxylic ester hydrolase activity	2.59E-02
84	GO:0003993: acid phosphatase activity	2.67E-02
85	GO:0051539: 4 iron, 4 sulfur cluster binding	2.84E-02
86	GO:0004364: glutathione transferase activity	3.01E-02
87	GO:0051537: 2 iron, 2 sulfur cluster binding	3.28E-02
88	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.46E-02
89	GO:0009055: electron carrier activity	3.71E-02
90	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.83E-02
91	GO:0008234: cysteine-type peptidase activity	4.12E-02

Rank	GO Term	Adjusted P value
1	GO:0016469: proton-transporting two-sector ATPase complex	0.00E+00
2	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	9.72E-05
3	GO:0045273: respiratory chain complex II	9.72E-05
4	GO:1990429: peroxisomal importomer complex	1.42E-04
5	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	1.42E-04
6	GO:0005697: telomerase holoenzyme complex	3.25E-04
7	GO:0005750: mitochondrial respiratory chain complex III	3.70E-04
8	GO:0005829: cytosol	3.81E-04
9	GO:0005753: mitochondrial proton-transporting ATP synthase complex	4.15E-04
10	GO:0045271: respiratory chain complex I	5.65E-04
11	GO:0036513: Derlin-1 retrotranslocation complex	7.63E-04
12	GO:0005747: mitochondrial respiratory chain complex I	7.96E-04
13	GO:0016471: vacuolar proton-transporting V-type ATPase complex	1.01E-03
14	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.01E-03
15	GO:0005746: mitochondrial respiratory chain	1.28E-03
16	GO:0016591: DNA-directed RNA polymerase II, holoenzyme	1.28E-03
17	GO:0031463: Cul3-RING ubiquitin ligase complex	1.57E-03
18	GO:0005801: cis-Golgi network	1.88E-03
19	GO:0005774: vacuolar membrane	2.25E-03
20	GO:0005739: mitochondrion	3.13E-03
21	GO:0005763: mitochondrial small ribosomal subunit	3.31E-03
22	GO:0000418: DNA-directed RNA polymerase IV complex	4.12E-03
23	GO:0031966: mitochondrial membrane	4.61E-03
24	GO:0009507: chloroplast	4.86E-03
25	GO:0005665: DNA-directed RNA polymerase II, core complex	4.99E-03
26	GO:0009508: plastid chromosome	5.45E-03
27	GO:0005773: vacuole	5.68E-03
28	GO:0030176: integral component of endoplasmic reticulum membrane	6.41E-03
29	GO:0000419: DNA-directed RNA polymerase V complex	6.91E-03
30	GO:0005758: mitochondrial intermembrane space	7.42E-03
31	GO:0005839: proteasome core complex	8.49E-03
32	GO:0005783: endoplasmic reticulum	1.02E-02
33	GO:0005887: integral component of plasma membrane	1.05E-02
34	GO:0009536: plastid	1.32E-02
35	GO:0009523: photosystem II	1.33E-02
36	GO:0009295: nucleoid	1.67E-02
37	GO:0005778: peroxisomal membrane	1.67E-02
38	GO:0005777: peroxisome	1.76E-02
39	GO:0005788: endoplasmic reticulum lumen	1.88E-02
40	GO:0009570: chloroplast stroma	2.41E-02
41	GO:0000325: plant-type vacuole	2.42E-02
42	GO:0015934: large ribosomal subunit	2.42E-02
43	GO:0000502: proteasome complex	3.83E-02
44	GO:0009505: plant-type cell wall	4.70E-02