co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G72520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006862: nucleotide transport	0.00E+00
2	GO:2001142: nicotinate transport	0.00E+00
3	GO:0034775: glutathione transmembrane transport	0.00E+00
4	GO:0045595: regulation of cell differentiation	0.00E+00
5	GO:0046967: cytosol to ER transport	0.00E+00
6	GO:2001143: N-methylnicotinate transport	0.00E+00
7	GO:0071289: cellular response to nickel ion	0.00E+00
8	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
9	GO:0010200: response to chitin	4.48E-18
10	GO:0002679: respiratory burst involved in defense response	1.27E-07
11	GO:0009611: response to wounding	9.67E-07
12	GO:0051865: protein autoubiquitination	1.39E-05
13	GO:2000280: regulation of root development	1.87E-05
14	GO:0006468: protein phosphorylation	2.62E-05
15	GO:0009620: response to fungus	6.10E-05
16	GO:0009737: response to abscisic acid	6.95E-05
17	GO:0009695: jasmonic acid biosynthetic process	1.14E-04
18	GO:0006751: glutathione catabolic process	1.23E-04
19	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.69E-04
20	GO:0006955: immune response	2.21E-04
21	GO:0045010: actin nucleation	2.80E-04
22	GO:0010726: positive regulation of hydrogen peroxide metabolic process	2.84E-04
23	GO:0051180: vitamin transport	2.84E-04
24	GO:0007229: integrin-mediated signaling pathway	2.84E-04
25	GO:0030974: thiamine pyrophosphate transport	2.84E-04
26	GO:0080157: regulation of plant-type cell wall organization or biogenesis	2.84E-04
27	GO:0050691: regulation of defense response to virus by host	2.84E-04
28	GO:0006680: glucosylceramide catabolic process	2.84E-04
29	GO:1900384: regulation of flavonol biosynthetic process	2.84E-04
30	GO:0009753: response to jasmonic acid	4.02E-04
31	GO:0006970: response to osmotic stress	5.98E-04
32	GO:0006952: defense response	6.03E-04
33	GO:0006741: NADP biosynthetic process	6.25E-04
34	GO:0015893: drug transport	6.25E-04
35	GO:0010507: negative regulation of autophagy	6.25E-04
36	GO:0046939: nucleotide phosphorylation	6.25E-04
37	GO:0042754: negative regulation of circadian rhythm	6.25E-04
38	GO:0009651: response to salt stress	9.77E-04
39	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	1.01E-03
40	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.01E-03
41	GO:0080168: abscisic acid transport	1.01E-03
42	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	1.01E-03
43	GO:0019674: NAD metabolic process	1.01E-03
44	GO:0042742: defense response to bacterium	1.34E-03
45	GO:0043207: response to external biotic stimulus	1.45E-03
46	GO:0030100: regulation of endocytosis	1.45E-03
47	GO:0033014: tetrapyrrole biosynthetic process	1.45E-03
48	GO:0019363: pyridine nucleotide biosynthetic process	1.45E-03
49	GO:0006470: protein dephosphorylation	1.58E-03
50	GO:0031408: oxylipin biosynthetic process	1.60E-03
51	GO:0045727: positive regulation of translation	1.94E-03
52	GO:0010107: potassium ion import	1.94E-03
53	GO:0034440: lipid oxidation	1.94E-03
54	GO:0045324: late endosome to vacuole transport	1.94E-03
55	GO:1902347: response to strigolactone	1.94E-03
56	GO:0015743: malate transport	1.94E-03
57	GO:0009652: thigmotropism	1.94E-03
58	GO:0009823: cytokinin catabolic process	2.48E-03
59	GO:0045487: gibberellin catabolic process	2.48E-03
60	GO:0030041: actin filament polymerization	2.48E-03
61	GO:0048544: recognition of pollen	2.80E-03
62	GO:0009749: response to glucose	3.01E-03
63	GO:0048317: seed morphogenesis	3.06E-03
64	GO:0006828: manganese ion transport	3.06E-03
65	GO:1900425: negative regulation of defense response to bacterium	3.06E-03
66	GO:0010337: regulation of salicylic acid metabolic process	3.06E-03
67	GO:0010942: positive regulation of cell death	3.06E-03
68	GO:0015691: cadmium ion transport	3.06E-03
69	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	3.06E-03
70	GO:0009723: response to ethylene	3.14E-03
71	GO:0002229: defense response to oomycetes	3.22E-03
72	GO:0010555: response to mannitol	3.68E-03
73	GO:0080086: stamen filament development	3.68E-03
74	GO:2000067: regulation of root morphogenesis	3.68E-03
75	GO:0046777: protein autophosphorylation	3.87E-03
76	GO:0009555: pollen development	4.15E-03
77	GO:0009414: response to water deprivation	4.24E-03
78	GO:1900057: positive regulation of leaf senescence	4.34E-03
79	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.34E-03
80	GO:0010161: red light signaling pathway	4.34E-03
81	GO:0006979: response to oxidative stress	4.52E-03
82	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.91E-03
83	GO:1900150: regulation of defense response to fungus	5.03E-03
84	GO:0009690: cytokinin metabolic process	5.03E-03
85	GO:2000070: regulation of response to water deprivation	5.03E-03
86	GO:0016567: protein ubiquitination	5.65E-03
87	GO:0007186: G-protein coupled receptor signaling pathway	5.77E-03
88	GO:0048193: Golgi vesicle transport	5.77E-03
89	GO:0009699: phenylpropanoid biosynthetic process	5.77E-03
90	GO:0009932: cell tip growth	5.77E-03
91	GO:0090333: regulation of stomatal closure	6.54E-03
92	GO:0006783: heme biosynthetic process	6.54E-03
93	GO:0009835: fruit ripening	6.54E-03
94	GO:0009086: methionine biosynthetic process	7.35E-03
95	GO:0008202: steroid metabolic process	7.35E-03
96	GO:0006779: porphyrin-containing compound biosynthetic process	7.35E-03
97	GO:0045087: innate immune response	7.68E-03
98	GO:0006896: Golgi to vacuole transport	8.19E-03
99	GO:0006782: protoporphyrinogen IX biosynthetic process	8.19E-03
100	GO:0055062: phosphate ion homeostasis	8.19E-03
101	GO:0019538: protein metabolic process	8.19E-03
102	GO:0007064: mitotic sister chromatid cohesion	8.19E-03
103	GO:0009617: response to bacterium	8.41E-03
104	GO:0006839: mitochondrial transport	8.76E-03
105	GO:0006816: calcium ion transport	9.06E-03
106	GO:0009698: phenylpropanoid metabolic process	9.06E-03
107	GO:1903507: negative regulation of nucleic acid-templated transcription	9.06E-03
108	GO:0009750: response to fructose	9.06E-03
109	GO:0030148: sphingolipid biosynthetic process	9.06E-03
110	GO:0010015: root morphogenesis	9.06E-03
111	GO:0051707: response to other organism	9.92E-03
112	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.96E-03
113	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	9.96E-03
114	GO:0055046: microgametogenesis	1.09E-02
115	GO:0006855: drug transmembrane transport	1.16E-02
116	GO:0002237: response to molecule of bacterial origin	1.19E-02
117	GO:0031347: regulation of defense response	1.20E-02
118	GO:0009901: anther dehiscence	1.29E-02
119	GO:0071732: cellular response to nitric oxide	1.29E-02
120	GO:0070588: calcium ion transmembrane transport	1.29E-02
121	GO:0009809: lignin biosynthetic process	1.34E-02
122	GO:0009738: abscisic acid-activated signaling pathway	1.43E-02
123	GO:0009863: salicylic acid mediated signaling pathway	1.50E-02
124	GO:0080167: response to karrikin	1.54E-02
125	GO:0035556: intracellular signal transduction	1.63E-02
126	GO:0048278: vesicle docking	1.72E-02
127	GO:0016998: cell wall macromolecule catabolic process	1.72E-02
128	GO:0098542: defense response to other organism	1.72E-02
129	GO:0006355: regulation of transcription, DNA-templated	1.76E-02
130	GO:0010017: red or far-red light signaling pathway	1.83E-02
131	GO:0016226: iron-sulfur cluster assembly	1.83E-02
132	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.83E-02
133	GO:0030245: cellulose catabolic process	1.83E-02
134	GO:0006351: transcription, DNA-templated	1.94E-02
135	GO:0009693: ethylene biosynthetic process	1.95E-02
136	GO:0071215: cellular response to abscisic acid stimulus	1.95E-02
137	GO:0009686: gibberellin biosynthetic process	1.95E-02
138	GO:0071369: cellular response to ethylene stimulus	1.95E-02
139	GO:0040007: growth	1.95E-02
140	GO:0048443: stamen development	2.07E-02
141	GO:0019722: calcium-mediated signaling	2.07E-02
142	GO:0010214: seed coat development	2.07E-02
143	GO:0042147: retrograde transport, endosome to Golgi	2.19E-02
144	GO:0010118: stomatal movement	2.31E-02
145	GO:0048653: anther development	2.31E-02
146	GO:0042631: cellular response to water deprivation	2.31E-02
147	GO:0009409: response to cold	2.37E-02
148	GO:0009960: endosperm development	2.44E-02
149	GO:0071472: cellular response to salt stress	2.44E-02
150	GO:0009751: response to salicylic acid	2.47E-02
151	GO:0061025: membrane fusion	2.57E-02
152	GO:0006623: protein targeting to vacuole	2.70E-02
153	GO:0006810: transport	2.72E-02
154	GO:0010193: response to ozone	2.83E-02
155	GO:0006891: intra-Golgi vesicle-mediated transport	2.83E-02
156	GO:0009630: gravitropism	2.97E-02
157	GO:0071281: cellular response to iron ion	3.11E-02
158	GO:1901657: glycosyl compound metabolic process	3.11E-02
159	GO:0019760: glucosinolate metabolic process	3.25E-02
160	GO:0009639: response to red or far red light	3.25E-02
161	GO:0007623: circadian rhythm	3.31E-02
162	GO:0006904: vesicle docking involved in exocytosis	3.39E-02
163	GO:0009873: ethylene-activated signaling pathway	3.46E-02
164	GO:0051607: defense response to virus	3.54E-02
165	GO:0006357: regulation of transcription from RNA polymerase II promoter	3.57E-02
166	GO:0001666: response to hypoxia	3.68E-02
167	GO:0007166: cell surface receptor signaling pathway	3.78E-02
168	GO:0010468: regulation of gene expression	3.94E-02
169	GO:0006906: vesicle fusion	3.98E-02
170	GO:0015995: chlorophyll biosynthetic process	4.13E-02
171	GO:0048573: photoperiodism, flowering	4.13E-02
172	GO:0008219: cell death	4.45E-02
173	GO:0007165: signal transduction	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0004698: calcium-dependent protein kinase C activity	0.00E+00
2	GO:0005522: profilin binding	0.00E+00
3	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
4	GO:0061798: GTP 3',8'-cyclase activity	0.00E+00
5	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
6	GO:0090416: nicotinate transporter activity	0.00E+00
7	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
8	GO:0003840: gamma-glutamyltransferase activity	1.33E-05
9	GO:0036374: glutathione hydrolase activity	1.33E-05
10	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	2.99E-05
11	GO:0016301: kinase activity	5.20E-05
12	GO:0005524: ATP binding	1.12E-04
13	GO:0030246: carbohydrate binding	1.30E-04
14	GO:0043565: sequence-specific DNA binding	1.58E-04
15	GO:0016621: cinnamoyl-CoA reductase activity	2.21E-04
16	GO:0090440: abscisic acid transporter activity	2.84E-04
17	GO:0004348: glucosylceramidase activity	2.84E-04
18	GO:0047150: betaine-homocysteine S-methyltransferase activity	2.84E-04
19	GO:0042736: NADH kinase activity	2.84E-04
20	GO:0090422: thiamine pyrophosphate transporter activity	2.84E-04
21	GO:0015085: calcium ion transmembrane transporter activity	2.84E-04
22	GO:0016629: 12-oxophytodienoate reductase activity	6.25E-04
23	GO:0004103: choline kinase activity	6.25E-04
24	GO:0008883: glutamyl-tRNA reductase activity	6.25E-04
25	GO:0001047: core promoter binding	6.25E-04
26	GO:0003958: NADPH-hemoprotein reductase activity	6.25E-04
27	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	6.25E-04
28	GO:0005516: calmodulin binding	7.03E-04
29	GO:0019888: protein phosphatase regulator activity	8.57E-04
30	GO:0031683: G-protein beta/gamma-subunit complex binding	1.01E-03
31	GO:0004758: serine C-palmitoyltransferase activity	1.01E-03
32	GO:0046423: allene-oxide cyclase activity	1.01E-03
33	GO:0004383: guanylate cyclase activity	1.01E-03
34	GO:0016165: linoleate 13S-lipoxygenase activity	1.01E-03
35	GO:0001664: G-protein coupled receptor binding	1.01E-03
36	GO:0004674: protein serine/threonine kinase activity	1.09E-03
37	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.45E-03
38	GO:0001653: peptide receptor activity	1.45E-03
39	GO:0019201: nucleotide kinase activity	1.45E-03
40	GO:0005253: anion channel activity	1.94E-03
41	GO:0015368: calcium:cation antiporter activity	1.94E-03
42	GO:0015369: calcium:proton antiporter activity	1.94E-03
43	GO:0019139: cytokinin dehydrogenase activity	2.48E-03
44	GO:0004842: ubiquitin-protein transferase activity	2.73E-03
45	GO:0010181: FMN binding	2.80E-03
46	GO:0050662: coenzyme binding	2.80E-03
47	GO:0004672: protein kinase activity	3.12E-03
48	GO:0004017: adenylate kinase activity	3.68E-03
49	GO:0019900: kinase binding	3.68E-03
50	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.14E-03
51	GO:0015140: malate transmembrane transporter activity	4.34E-03
52	GO:0008143: poly(A) binding	4.34E-03
53	GO:0102425: myricetin 3-O-glucosyltransferase activity	4.34E-03
54	GO:0102360: daphnetin 3-O-glucosyltransferase activity	4.34E-03
55	GO:0044212: transcription regulatory region DNA binding	4.45E-03
56	GO:0047893: flavonol 3-O-glucosyltransferase activity	5.03E-03
57	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	5.03E-03
58	GO:0004722: protein serine/threonine phosphatase activity	5.28E-03
59	GO:0003700: transcription factor activity, sequence-specific DNA binding	5.32E-03
60	GO:0004721: phosphoprotein phosphatase activity	5.47E-03
61	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	5.77E-03
62	GO:0003951: NAD+ kinase activity	5.77E-03
63	GO:0008142: oxysterol binding	5.77E-03
64	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	7.01E-03
65	GO:0047617: acyl-CoA hydrolase activity	7.35E-03
66	GO:0004712: protein serine/threonine/tyrosine kinase activity	8.40E-03
67	GO:0005388: calcium-transporting ATPase activity	1.09E-02
68	GO:0008131: primary amine oxidase activity	1.19E-02
69	GO:0003714: transcription corepressor activity	1.50E-02
70	GO:0035251: UDP-glucosyltransferase activity	1.72E-02
71	GO:0004707: MAP kinase activity	1.72E-02
72	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.72E-02
73	GO:0003779: actin binding	1.86E-02
74	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.93E-02
75	GO:0022891: substrate-specific transmembrane transporter activity	1.95E-02
76	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.21E-02
77	GO:0016853: isomerase activity	2.57E-02
78	GO:0030170: pyridoxal phosphate binding	2.66E-02
79	GO:0051015: actin filament binding	3.11E-02
80	GO:0015297: antiporter activity	3.16E-02
81	GO:0102483: scopolin beta-glucosidase activity	4.13E-02
82	GO:0004806: triglyceride lipase activity	4.13E-02
83	GO:0030247: polysaccharide binding	4.13E-02
84	GO:0004004: ATP-dependent RNA helicase activity	4.13E-02
85	GO:0004683: calmodulin-dependent protein kinase activity	4.13E-02
86	GO:0015238: drug transmembrane transporter activity	4.60E-02
87	GO:0005096: GTPase activator activity	4.60E-02
88	GO:0005215: transporter activity	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0005911: cell-cell junction	2.84E-04
2	GO:0019008: molybdopterin synthase complex	2.84E-04
3	GO:0005886: plasma membrane	3.70E-04
4	GO:0000159: protein phosphatase type 2A complex	6.61E-04
5	GO:0070062: extracellular exosome	1.45E-03
6	GO:0005770: late endosome	2.61E-03
7	GO:0030140: trans-Golgi network transport vesicle	3.06E-03
8	GO:0005737: cytoplasm	5.52E-03
9	GO:0010494: cytoplasmic stress granule	6.54E-03
10	GO:0016604: nuclear body	7.35E-03
11	GO:0090404: pollen tube tip	9.06E-03
12	GO:0071013: catalytic step 2 spliceosome	9.06E-03
13	GO:0031902: late endosome membrane	9.14E-03
14	GO:0005758: mitochondrial intermembrane space	1.50E-02
15	GO:0030136: clathrin-coated vesicle	2.19E-02
16	GO:0005634: nucleus	2.77E-02
17	GO:0005789: endoplasmic reticulum membrane	2.90E-02
18	GO:0000145: exocyst	2.97E-02
19	GO:0016021: integral component of membrane	3.03E-02
20	GO:0009705: plant-type vacuole membrane	3.31E-02
21	GO:0009707: chloroplast outer membrane	4.45E-02