GO Enrichment Analysis of Co-expressed Genes with
AT1G72440
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1900363: regulation of mRNA polyadenylation | 0.00E+00 |
| 2 | GO:0071426: ribonucleoprotein complex export from nucleus | 0.00E+00 |
| 3 | GO:0010930: negative regulation of auxin mediated signaling pathway | 6.71E-06 |
| 4 | GO:1901181: negative regulation of cellular response to caffeine | 6.71E-06 |
| 5 | GO:0031124: mRNA 3'-end processing | 1.83E-05 |
| 6 | GO:0032465: regulation of cytokinesis | 5.17E-05 |
| 7 | GO:0006405: RNA export from nucleus | 9.53E-05 |
| 8 | GO:0034052: positive regulation of plant-type hypersensitive response | 9.53E-05 |
| 9 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.46E-04 |
| 10 | GO:0043068: positive regulation of programmed cell death | 2.03E-04 |
| 11 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 2.33E-04 |
| 12 | GO:0009880: embryonic pattern specification | 2.33E-04 |
| 13 | GO:0006349: regulation of gene expression by genetic imprinting | 2.95E-04 |
| 14 | GO:0006378: mRNA polyadenylation | 3.61E-04 |
| 15 | GO:0008285: negative regulation of cell proliferation | 3.61E-04 |
| 16 | GO:0009294: DNA mediated transformation | 7.31E-04 |
| 17 | GO:0051028: mRNA transport | 8.13E-04 |
| 18 | GO:0010501: RNA secondary structure unwinding | 8.55E-04 |
| 19 | GO:0006606: protein import into nucleus | 8.55E-04 |
| 20 | GO:0009960: endosperm development | 8.97E-04 |
| 21 | GO:0006364: rRNA processing | 2.62E-03 |
| 22 | GO:0006417: regulation of translation | 2.80E-03 |
| 23 | GO:0009626: plant-type hypersensitive response | 3.06E-03 |
| 24 | GO:0006396: RNA processing | 3.38E-03 |
| 25 | GO:0006413: translational initiation | 4.59E-03 |
| 26 | GO:0009451: RNA modification | 4.89E-03 |
| 27 | GO:0009793: embryo development ending in seed dormancy | 5.92E-03 |
| 28 | GO:0042254: ribosome biogenesis | 6.59E-03 |
| 29 | GO:0045892: negative regulation of transcription, DNA-templated | 8.66E-03 |
| 30 | GO:0006351: transcription, DNA-templated | 1.05E-02 |
| 31 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 1.21E-02 |
| 32 | GO:0051301: cell division | 1.58E-02 |
| 33 | GO:0045893: positive regulation of transcription, DNA-templated | 1.64E-02 |
| 34 | GO:0006979: response to oxidative stress | 2.47E-02 |
| 35 | GO:0030154: cell differentiation | 2.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001054: RNA polymerase I activity | 2.46E-06 |
| 2 | GO:0000166: nucleotide binding | 3.12E-06 |
| 3 | GO:0003723: RNA binding | 4.08E-06 |
| 4 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.06E-04 |
| 5 | GO:0008026: ATP-dependent helicase activity | 1.65E-04 |
| 6 | GO:0030515: snoRNA binding | 1.74E-04 |
| 7 | GO:0017056: structural constituent of nuclear pore | 2.03E-04 |
| 8 | GO:0005487: nucleocytoplasmic transporter activity | 2.95E-04 |
| 9 | GO:0005543: phospholipid binding | 3.61E-04 |
| 10 | GO:0004521: endoribonuclease activity | 3.96E-04 |
| 11 | GO:0004519: endonuclease activity | 8.19E-04 |
| 12 | GO:0003713: transcription coactivator activity | 8.97E-04 |
| 13 | GO:0004004: ATP-dependent RNA helicase activity | 1.45E-03 |
| 14 | GO:0008236: serine-type peptidase activity | 1.50E-03 |
| 15 | GO:0004252: serine-type endopeptidase activity | 4.15E-03 |
| 16 | GO:0003743: translation initiation factor activity | 5.36E-03 |
| 17 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 8.56E-03 |
| 18 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 9.23E-03 |
| 19 | GO:0003677: DNA binding | 1.28E-02 |
| 20 | GO:0005524: ATP binding | 1.92E-02 |
| 21 | GO:0005516: calmodulin binding | 1.99E-02 |
| 22 | GO:0044212: transcription regulatory region DNA binding | 2.46E-02 |
| 23 | GO:0003729: mRNA binding | 3.27E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005736: DNA-directed RNA polymerase I complex | 1.29E-06 |
| 2 | GO:0034388: Pwp2p-containing subcomplex of 90S preribosome | 6.71E-06 |
| 3 | GO:0030688: preribosome, small subunit precursor | 6.71E-06 |
| 4 | GO:0044613: nuclear pore central transport channel | 1.83E-05 |
| 5 | GO:0005847: mRNA cleavage and polyadenylation specificity factor complex | 9.53E-05 |
| 6 | GO:0034399: nuclear periphery | 2.03E-04 |
| 7 | GO:0032040: small-subunit processome | 3.96E-04 |
| 8 | GO:0005730: nucleolus | 5.01E-04 |
| 9 | GO:0005829: cytosol | 2.69E-03 |
| 10 | GO:0005635: nuclear envelope | 2.74E-03 |
| 11 | GO:0005834: heterotrimeric G-protein complex | 3.06E-03 |
| 12 | GO:0005634: nucleus | 6.91E-03 |
| 13 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 6.93E-03 |