GO Enrichment Analysis of Co-expressed Genes with
AT1G71990
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 2 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 4 | GO:0010492: maintenance of shoot apical meristem identity | 2.21E-05 |
| 5 | GO:0000476: maturation of 4.5S rRNA | 5.48E-05 |
| 6 | GO:0000967: rRNA 5'-end processing | 5.48E-05 |
| 7 | GO:2000012: regulation of auxin polar transport | 8.50E-05 |
| 8 | GO:0080181: lateral root branching | 1.34E-04 |
| 9 | GO:0034470: ncRNA processing | 1.34E-04 |
| 10 | GO:0005977: glycogen metabolic process | 2.28E-04 |
| 11 | GO:0007276: gamete generation | 3.33E-04 |
| 12 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 3.33E-04 |
| 13 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 3.33E-04 |
| 14 | GO:2001141: regulation of RNA biosynthetic process | 3.33E-04 |
| 15 | GO:0010239: chloroplast mRNA processing | 3.33E-04 |
| 16 | GO:0022622: root system development | 4.45E-04 |
| 17 | GO:0010021: amylopectin biosynthetic process | 4.45E-04 |
| 18 | GO:0016311: dephosphorylation | 6.38E-04 |
| 19 | GO:0009658: chloroplast organization | 6.72E-04 |
| 20 | GO:0042549: photosystem II stabilization | 6.92E-04 |
| 21 | GO:0007568: aging | 7.69E-04 |
| 22 | GO:1901259: chloroplast rRNA processing | 8.25E-04 |
| 23 | GO:0032880: regulation of protein localization | 9.62E-04 |
| 24 | GO:0006605: protein targeting | 1.11E-03 |
| 25 | GO:0000105: histidine biosynthetic process | 1.11E-03 |
| 26 | GO:0009231: riboflavin biosynthetic process | 1.11E-03 |
| 27 | GO:0017004: cytochrome complex assembly | 1.26E-03 |
| 28 | GO:0071482: cellular response to light stimulus | 1.26E-03 |
| 29 | GO:0048507: meristem development | 1.41E-03 |
| 30 | GO:0005982: starch metabolic process | 1.58E-03 |
| 31 | GO:0006096: glycolytic process | 1.67E-03 |
| 32 | GO:0006913: nucleocytoplasmic transport | 1.93E-03 |
| 33 | GO:0019684: photosynthesis, light reaction | 1.93E-03 |
| 34 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.93E-03 |
| 35 | GO:0006352: DNA-templated transcription, initiation | 1.93E-03 |
| 36 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.93E-03 |
| 37 | GO:0005983: starch catabolic process | 2.11E-03 |
| 38 | GO:0006094: gluconeogenesis | 2.30E-03 |
| 39 | GO:0010020: chloroplast fission | 2.49E-03 |
| 40 | GO:0009887: animal organ morphogenesis | 2.49E-03 |
| 41 | GO:0019853: L-ascorbic acid biosynthetic process | 2.70E-03 |
| 42 | GO:0010030: positive regulation of seed germination | 2.70E-03 |
| 43 | GO:0000162: tryptophan biosynthetic process | 2.90E-03 |
| 44 | GO:0048511: rhythmic process | 3.54E-03 |
| 45 | GO:0071369: cellular response to ethylene stimulus | 4.00E-03 |
| 46 | GO:0006012: galactose metabolic process | 4.00E-03 |
| 47 | GO:0042127: regulation of cell proliferation | 4.23E-03 |
| 48 | GO:0009306: protein secretion | 4.23E-03 |
| 49 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 4.47E-03 |
| 50 | GO:0008284: positive regulation of cell proliferation | 4.47E-03 |
| 51 | GO:0042631: cellular response to water deprivation | 4.71E-03 |
| 52 | GO:0009958: positive gravitropism | 4.96E-03 |
| 53 | GO:0042752: regulation of circadian rhythm | 5.22E-03 |
| 54 | GO:0019252: starch biosynthetic process | 5.48E-03 |
| 55 | GO:0019760: glucosinolate metabolic process | 6.55E-03 |
| 56 | GO:0009911: positive regulation of flower development | 7.40E-03 |
| 57 | GO:0010027: thylakoid membrane organization | 7.40E-03 |
| 58 | GO:0015979: photosynthesis | 7.46E-03 |
| 59 | GO:0015995: chlorophyll biosynthetic process | 8.29E-03 |
| 60 | GO:0009813: flavonoid biosynthetic process | 9.22E-03 |
| 61 | GO:0032259: methylation | 9.24E-03 |
| 62 | GO:0006499: N-terminal protein myristoylation | 9.54E-03 |
| 63 | GO:0048527: lateral root development | 9.86E-03 |
| 64 | GO:0009867: jasmonic acid mediated signaling pathway | 1.05E-02 |
| 65 | GO:0009637: response to blue light | 1.05E-02 |
| 66 | GO:0006631: fatty acid metabolic process | 1.19E-02 |
| 67 | GO:0010114: response to red light | 1.26E-02 |
| 68 | GO:0006457: protein folding | 2.23E-02 |
| 69 | GO:0045490: pectin catabolic process | 2.94E-02 |
| 70 | GO:0006470: protein dephosphorylation | 3.24E-02 |
| 71 | GO:0055114: oxidation-reduction process | 3.76E-02 |
| 72 | GO:0030154: cell differentiation | 3.79E-02 |
| 73 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.79E-02 |
| 74 | GO:0044550: secondary metabolite biosynthetic process | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 2 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 3 | GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity | 0.00E+00 |
| 4 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 5 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 6 | GO:0050308: sugar-phosphatase activity | 5.48E-05 |
| 7 | GO:0019203: carbohydrate phosphatase activity | 5.48E-05 |
| 8 | GO:0004347: glucose-6-phosphate isomerase activity | 5.48E-05 |
| 9 | GO:0019156: isoamylase activity | 1.34E-04 |
| 10 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.34E-04 |
| 11 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.34E-04 |
| 12 | GO:0005504: fatty acid binding | 2.28E-04 |
| 13 | GO:0004751: ribose-5-phosphate isomerase activity | 2.28E-04 |
| 14 | GO:0016851: magnesium chelatase activity | 3.33E-04 |
| 15 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 3.33E-04 |
| 16 | GO:0016987: sigma factor activity | 4.45E-04 |
| 17 | GO:0045430: chalcone isomerase activity | 4.45E-04 |
| 18 | GO:0001053: plastid sigma factor activity | 4.45E-04 |
| 19 | GO:0004556: alpha-amylase activity | 6.92E-04 |
| 20 | GO:2001070: starch binding | 6.92E-04 |
| 21 | GO:0004033: aldo-keto reductase (NADP) activity | 1.11E-03 |
| 22 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.24E-03 |
| 23 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.41E-03 |
| 24 | GO:0004521: endoribonuclease activity | 2.11E-03 |
| 25 | GO:0008083: growth factor activity | 2.49E-03 |
| 26 | GO:0004190: aspartic-type endopeptidase activity | 2.70E-03 |
| 27 | GO:0030570: pectate lyase activity | 4.00E-03 |
| 28 | GO:0008168: methyltransferase activity | 5.08E-03 |
| 29 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 8.91E-03 |
| 30 | GO:0009055: electron carrier activity | 1.04E-02 |
| 31 | GO:0003993: acid phosphatase activity | 1.09E-02 |
| 32 | GO:0005198: structural molecule activity | 1.37E-02 |
| 33 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.55E-02 |
| 34 | GO:0016874: ligase activity | 1.91E-02 |
| 35 | GO:0015035: protein disulfide oxidoreductase activity | 2.04E-02 |
| 36 | GO:0008026: ATP-dependent helicase activity | 2.08E-02 |
| 37 | GO:0004386: helicase activity | 2.12E-02 |
| 38 | GO:0019843: rRNA binding | 2.34E-02 |
| 39 | GO:0008017: microtubule binding | 3.04E-02 |
| 40 | GO:0042802: identical protein binding | 3.49E-02 |
| 41 | GO:0016491: oxidoreductase activity | 4.57E-02 |
| 42 | GO:0008233: peptidase activity | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009349: riboflavin synthase complex | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.87E-10 |
| 4 | GO:0009570: chloroplast stroma | 2.00E-05 |
| 5 | GO:0010007: magnesium chelatase complex | 2.28E-04 |
| 6 | GO:0030660: Golgi-associated vesicle membrane | 4.45E-04 |
| 7 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 4.45E-04 |
| 8 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.11E-03 |
| 9 | GO:0055028: cortical microtubule | 1.75E-03 |
| 10 | GO:0005765: lysosomal membrane | 1.93E-03 |
| 11 | GO:0090404: pollen tube tip | 1.93E-03 |
| 12 | GO:0042651: thylakoid membrane | 3.32E-03 |
| 13 | GO:0009532: plastid stroma | 3.54E-03 |
| 14 | GO:0009941: chloroplast envelope | 3.87E-03 |
| 15 | GO:0005874: microtubule | 6.32E-03 |
| 16 | GO:0031977: thylakoid lumen | 1.19E-02 |
| 17 | GO:0010008: endosome membrane | 1.79E-02 |
| 18 | GO:0009535: chloroplast thylakoid membrane | 1.98E-02 |
| 19 | GO:0009579: thylakoid | 2.06E-02 |
| 20 | GO:0009543: chloroplast thylakoid lumen | 2.34E-02 |
| 21 | GO:0005615: extracellular space | 3.19E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 3.59E-02 |
| 23 | GO:0009536: plastid | 4.26E-02 |