Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G71940

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2001142: nicotinate transport0.00E+00
2GO:0060416: response to growth hormone0.00E+00
3GO:2001143: N-methylnicotinate transport0.00E+00
4GO:1900067: regulation of cellular response to alkaline pH0.00E+00
5GO:0045227: capsule polysaccharide biosynthetic process3.22E-06
6GO:0033358: UDP-L-arabinose biosynthetic process3.22E-06
7GO:0071669: plant-type cell wall organization or biogenesis1.67E-05
8GO:0010482: regulation of epidermal cell division5.48E-05
9GO:0007229: integrin-mediated signaling pathway5.48E-05
10GO:0019567: arabinose biosynthetic process5.48E-05
11GO:0006839: mitochondrial transport6.02E-05
12GO:0090351: seedling development1.11E-04
13GO:0009225: nucleotide-sugar metabolic process1.11E-04
14GO:0080148: negative regulation of response to water deprivation1.34E-04
15GO:0046939: nucleotide phosphorylation1.34E-04
16GO:0006012: galactose metabolic process2.10E-04
17GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process2.28E-04
18GO:0006065: UDP-glucuronate biosynthetic process2.28E-04
19GO:0052546: cell wall pectin metabolic process2.28E-04
20GO:0009306: protein secretion2.29E-04
21GO:0080024: indolebutyric acid metabolic process3.33E-04
22GO:0043207: response to external biotic stimulus3.33E-04
23GO:0033356: UDP-L-arabinose metabolic process4.45E-04
24GO:0051567: histone H3-K9 methylation4.45E-04
25GO:0006749: glutathione metabolic process4.45E-04
26GO:0015867: ATP transport4.45E-04
27GO:0009611: response to wounding4.94E-04
28GO:0009651: response to salt stress5.14E-04
29GO:0032957: inositol trisphosphate metabolic process5.66E-04
30GO:0030244: cellulose biosynthetic process6.69E-04
31GO:0046855: inositol phosphate dephosphorylation6.92E-04
32GO:1900425: negative regulation of defense response to bacterium6.92E-04
33GO:0015866: ADP transport6.92E-04
34GO:0006777: Mo-molybdopterin cofactor biosynthetic process6.92E-04
35GO:0009832: plant-type cell wall biogenesis7.02E-04
36GO:0010200: response to chitin9.14E-04
37GO:0009704: de-etiolation1.11E-03
38GO:0009699: phenylpropanoid biosynthetic process1.26E-03
39GO:0090333: regulation of stomatal closure1.41E-03
40GO:0009835: fruit ripening1.41E-03
41GO:0009753: response to jasmonic acid1.55E-03
42GO:0010215: cellulose microfibril organization1.75E-03
43GO:0015770: sucrose transport1.93E-03
44GO:1903507: negative regulation of nucleic acid-templated transcription1.93E-03
45GO:0048765: root hair cell differentiation1.93E-03
46GO:0046856: phosphatidylinositol dephosphorylation1.93E-03
47GO:0010152: pollen maturation2.11E-03
48GO:0000266: mitochondrial fission2.11E-03
49GO:0034605: cellular response to heat2.49E-03
50GO:0005985: sucrose metabolic process2.70E-03
51GO:0010026: trichome differentiation3.32E-03
52GO:0009695: jasmonic acid biosynthetic process3.32E-03
53GO:0045893: positive regulation of transcription, DNA-templated3.47E-03
54GO:0098542: defense response to other organism3.54E-03
55GO:0016226: iron-sulfur cluster assembly3.77E-03
56GO:2000022: regulation of jasmonic acid mediated signaling pathway3.77E-03
57GO:0007005: mitochondrion organization3.77E-03
58GO:0055085: transmembrane transport3.94E-03
59GO:0009693: ethylene biosynthetic process4.00E-03
60GO:0006817: phosphate ion transport4.23E-03
61GO:0000271: polysaccharide biosynthetic process4.71E-03
62GO:0048868: pollen tube development4.96E-03
63GO:0002229: defense response to oomycetes5.74E-03
64GO:0006635: fatty acid beta-oxidation5.74E-03
65GO:0009723: response to ethylene6.10E-03
66GO:0006904: vesicle docking involved in exocytosis6.83E-03
67GO:0009414: response to water deprivation6.91E-03
68GO:0016579: protein deubiquitination7.11E-03
69GO:0042742: defense response to bacterium7.12E-03
70GO:0071555: cell wall organization7.12E-03
71GO:0009607: response to biotic stimulus7.69E-03
72GO:0016049: cell growth8.60E-03
73GO:0008219: cell death8.91E-03
74GO:0048767: root hair elongation9.22E-03
75GO:0009751: response to salicylic acid9.52E-03
76GO:0009407: toxin catabolic process9.54E-03
77GO:0048527: lateral root development9.86E-03
78GO:0009867: jasmonic acid mediated signaling pathway1.05E-02
79GO:0006810: transport1.16E-02
80GO:0046686: response to cadmium ion1.25E-02
81GO:0006357: regulation of transcription from RNA polymerase II promoter1.28E-02
82GO:0009636: response to toxic substance1.37E-02
83GO:0031347: regulation of defense response1.44E-02
84GO:0009809: lignin biosynthetic process1.55E-02
85GO:0009555: pollen development1.72E-02
86GO:0009737: response to abscisic acid1.86E-02
87GO:0009620: response to fungus1.87E-02
88GO:0006355: regulation of transcription, DNA-templated2.44E-02
89GO:0009845: seed germination2.47E-02
90GO:0016036: cellular response to phosphate starvation2.80E-02
91GO:0040008: regulation of growth2.85E-02
92GO:0009617: response to bacterium3.34E-02
93GO:0030154: cell differentiation3.79E-02
94GO:0009658: chloroplast organization4.01E-02
95GO:0006970: response to osmotic stress4.23E-02
96GO:0007049: cell cycle4.34E-02
97GO:0015031: protein transport4.41E-02
98GO:0080167: response to karrikin4.68E-02
99GO:0009409: response to cold4.69E-02
100GO:0046777: protein autophosphorylation4.90E-02
RankGO TermAdjusted P value
1GO:0090417: N-methylnicotinate transporter activity0.00E+00
2GO:0061798: GTP 3',8'-cyclase activity0.00E+00
3GO:0090416: nicotinate transporter activity0.00E+00
4GO:0050373: UDP-arabinose 4-epimerase activity3.22E-06
5GO:0003978: UDP-glucose 4-epimerase activity1.21E-05
6GO:0052691: UDP-arabinopyranose mutase activity1.34E-04
7GO:1990585: hydroxyproline O-arabinosyltransferase activity1.34E-04
8GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity2.28E-04
9GO:0046423: allene-oxide cyclase activity2.28E-04
10GO:0003979: UDP-glucose 6-dehydrogenase activity2.28E-04
11GO:0004445: inositol-polyphosphate 5-phosphatase activity3.33E-04
12GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity3.33E-04
13GO:0019201: nucleotide kinase activity3.33E-04
14GO:0016866: intramolecular transferase activity4.45E-04
15GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity6.92E-04
16GO:0051753: mannan synthase activity8.25E-04
17GO:0004017: adenylate kinase activity8.25E-04
18GO:0005347: ATP transmembrane transporter activity8.25E-04
19GO:0015217: ADP transmembrane transporter activity8.25E-04
20GO:0008506: sucrose:proton symporter activity9.62E-04
21GO:0052747: sinapyl alcohol dehydrogenase activity1.11E-03
22GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity1.11E-03
23GO:0016207: 4-coumarate-CoA ligase activity1.41E-03
24GO:0047617: acyl-CoA hydrolase activity1.58E-03
25GO:0008515: sucrose transmembrane transporter activity1.93E-03
26GO:0045551: cinnamyl-alcohol dehydrogenase activity2.11E-03
27GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity2.11E-03
28GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.49E-03
29GO:0015144: carbohydrate transmembrane transporter activity2.98E-03
30GO:0001046: core promoter sequence-specific DNA binding3.11E-03
31GO:0003714: transcription corepressor activity3.11E-03
32GO:0005351: sugar:proton symporter activity3.35E-03
33GO:0019706: protein-cysteine S-palmitoyltransferase activity3.54E-03
34GO:0016760: cellulose synthase (UDP-forming) activity4.00E-03
35GO:0022891: substrate-specific transmembrane transporter activity4.00E-03
36GO:0016853: isomerase activity5.22E-03
37GO:0004843: thiol-dependent ubiquitin-specific protease activity5.74E-03
38GO:0016759: cellulose synthase activity6.55E-03
39GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting7.82E-03
40GO:0003824: catalytic activity8.02E-03
41GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding8.71E-03
42GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity8.91E-03
43GO:0004712: protein serine/threonine/tyrosine kinase activity1.12E-02
44GO:0051539: 4 iron, 4 sulfur cluster binding1.15E-02
45GO:0004364: glutathione transferase activity1.22E-02
46GO:0051537: 2 iron, 2 sulfur cluster binding1.33E-02
47GO:0015293: symporter activity1.37E-02
48GO:0051287: NAD binding1.44E-02
49GO:0016298: lipase activity1.59E-02
50GO:0043565: sequence-specific DNA binding1.63E-02
51GO:0016874: ligase activity1.91E-02
52GO:0022857: transmembrane transporter activity1.91E-02
53GO:0003700: transcription factor activity, sequence-specific DNA binding2.05E-02
54GO:0030170: pyridoxal phosphate binding2.52E-02
55GO:0005516: calmodulin binding2.59E-02
56GO:0008565: protein transporter activity2.66E-02
57GO:0005525: GTP binding2.83E-02
58GO:0015297: antiporter activity2.85E-02
59GO:0008017: microtubule binding3.04E-02
60GO:0042802: identical protein binding3.49E-02
61GO:0016788: hydrolase activity, acting on ester bonds4.07E-02
62GO:0004842: ubiquitin-protein transferase activity4.79E-02
RankGO TermAdjusted P value
1GO:0019008: molybdopterin synthase complex5.48E-05
2GO:0032580: Golgi cisterna membrane4.36E-04
3GO:0005886: plasma membrane7.52E-04
4GO:0030173: integral component of Golgi membrane8.25E-04
5GO:0005779: integral component of peroxisomal membrane1.26E-03
6GO:0005743: mitochondrial inner membrane1.29E-03
7GO:0090404: pollen tube tip1.93E-03
8GO:0005938: cell cortex2.30E-03
9GO:0009524: phragmoplast2.63E-03
10GO:0005758: mitochondrial intermembrane space3.11E-03
11GO:0005794: Golgi apparatus4.67E-03
12GO:0005802: trans-Golgi network5.29E-03
13GO:0009504: cell plate5.48E-03
14GO:0005768: endosome6.23E-03
15GO:0005774: vacuolar membrane9.05E-03
16GO:0090406: pollen tube1.26E-02
17GO:0031225: anchored component of membrane2.68E-02
18GO:0005759: mitochondrial matrix2.75E-02
19GO:0046658: anchored component of plasma membrane3.59E-02
20GO:0005737: cytoplasm3.60E-02
21GO:0016020: membrane4.54E-02
22GO:0005874: microtubule4.56E-02
23GO:0016021: integral component of membrane4.81E-02
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Gene type



Gene DE type