GO Enrichment Analysis of Co-expressed Genes with
AT1G71850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1902184: negative regulation of shoot apical meristem development | 0.00E+00 |
| 2 | GO:1990481: mRNA pseudouridine synthesis | 0.00E+00 |
| 3 | GO:0080180: 2-methylguanosine metabolic process | 0.00E+00 |
| 4 | GO:0090070: positive regulation of ribosome biogenesis | 0.00E+00 |
| 5 | GO:0000495: box H/ACA snoRNA 3'-end processing | 0.00E+00 |
| 6 | GO:0009451: RNA modification | 5.34E-06 |
| 7 | GO:0031118: rRNA pseudouridine synthesis | 2.88E-05 |
| 8 | GO:0043985: histone H4-R3 methylation | 2.88E-05 |
| 9 | GO:0031120: snRNA pseudouridine synthesis | 2.88E-05 |
| 10 | GO:0006364: rRNA processing | 3.23E-05 |
| 11 | GO:0042254: ribosome biogenesis | 2.37E-04 |
| 12 | GO:1900864: mitochondrial RNA modification | 2.57E-04 |
| 13 | GO:0046345: abscisic acid catabolic process | 2.57E-04 |
| 14 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 4.06E-04 |
| 15 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.86E-04 |
| 16 | GO:0006400: tRNA modification | 5.68E-04 |
| 17 | GO:0042255: ribosome assembly | 6.55E-04 |
| 18 | GO:0001522: pseudouridine synthesis | 6.55E-04 |
| 19 | GO:0006417: regulation of translation | 7.15E-04 |
| 20 | GO:1900865: chloroplast RNA modification | 9.29E-04 |
| 21 | GO:2000012: regulation of auxin polar transport | 1.34E-03 |
| 22 | GO:0010030: positive regulation of seed germination | 1.56E-03 |
| 23 | GO:0048825: cotyledon development | 3.13E-03 |
| 24 | GO:0032259: methylation | 4.07E-03 |
| 25 | GO:0006950: response to stress | 4.71E-03 |
| 26 | GO:0009553: embryo sac development | 1.09E-02 |
| 27 | GO:0006396: RNA processing | 1.14E-02 |
| 28 | GO:0007166: cell surface receptor signaling pathway | 1.81E-02 |
| 29 | GO:0008380: RNA splicing | 1.86E-02 |
| 30 | GO:0048366: leaf development | 2.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003723: RNA binding | 2.28E-11 |
| 2 | GO:0000166: nucleotide binding | 3.38E-07 |
| 3 | GO:0004519: endonuclease activity | 2.34E-06 |
| 4 | GO:0070181: small ribosomal subunit rRNA binding | 1.27E-04 |
| 5 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 6.49E-04 |
| 6 | GO:0043022: ribosome binding | 6.55E-04 |
| 7 | GO:0003729: mRNA binding | 7.14E-04 |
| 8 | GO:0008173: RNA methyltransferase activity | 7.44E-04 |
| 9 | GO:0001054: RNA polymerase I activity | 1.13E-03 |
| 10 | GO:0001056: RNA polymerase III activity | 1.23E-03 |
| 11 | GO:0009982: pseudouridine synthase activity | 1.34E-03 |
| 12 | GO:0008168: methyltransferase activity | 2.26E-03 |
| 13 | GO:0004004: ATP-dependent RNA helicase activity | 4.71E-03 |
| 14 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 6.13E-03 |
| 15 | GO:0016787: hydrolase activity | 6.52E-03 |
| 16 | GO:0008026: ATP-dependent helicase activity | 1.16E-02 |
| 17 | GO:0019843: rRNA binding | 1.31E-02 |
| 18 | GO:0003735: structural constituent of ribosome | 3.04E-02 |
| 19 | GO:0016887: ATPase activity | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034455: t-UTP complex | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 1.78E-09 |
| 3 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.53E-05 |
| 4 | GO:0031429: box H/ACA snoRNP complex | 1.89E-04 |
| 5 | GO:0005844: polysome | 2.57E-04 |
| 6 | GO:0005634: nucleus | 5.78E-04 |
| 7 | GO:0005834: heterotrimeric G-protein complex | 8.10E-04 |
| 8 | GO:0005763: mitochondrial small ribosomal subunit | 8.35E-04 |
| 9 | GO:0005736: DNA-directed RNA polymerase I complex | 8.35E-04 |
| 10 | GO:0005666: DNA-directed RNA polymerase III complex | 9.29E-04 |
| 11 | GO:0032040: small-subunit processome | 1.23E-03 |
| 12 | GO:0015935: small ribosomal subunit | 2.04E-03 |
| 13 | GO:0019898: extrinsic component of membrane | 3.13E-03 |
| 14 | GO:0005759: mitochondrial matrix | 1.54E-02 |
| 15 | GO:0005840: ribosome | 1.60E-02 |
| 16 | GO:0005743: mitochondrial inner membrane | 3.27E-02 |