Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G71500

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway0.00E+00
2GO:1901918: negative regulation of exoribonuclease activity0.00E+00
3GO:0098586: cellular response to virus0.00E+00
4GO:0009715: chalcone biosynthetic process0.00E+00
5GO:0017009: protein-phycocyanobilin linkage0.00E+00
6GO:0042821: pyridoxal biosynthetic process0.00E+00
7GO:0042820: vitamin B6 catabolic process0.00E+00
8GO:1901965: endoplasmic reticulum to chloroplast transport0.00E+00
9GO:0015882: L-ascorbic acid transport0.00E+00
10GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
11GO:0006114: glycerol biosynthetic process0.00E+00
12GO:0051246: regulation of protein metabolic process0.00E+00
13GO:0006399: tRNA metabolic process0.00E+00
14GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
15GO:0070125: mitochondrial translational elongation0.00E+00
16GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
17GO:0015979: photosynthesis2.69E-08
18GO:0090391: granum assembly3.07E-08
19GO:0010027: thylakoid membrane organization2.94E-06
20GO:0018298: protein-chromophore linkage5.92E-06
21GO:0009657: plastid organization1.16E-05
22GO:0006021: inositol biosynthetic process5.93E-05
23GO:0015995: chlorophyll biosynthetic process7.98E-05
24GO:0016120: carotene biosynthetic process9.36E-05
25GO:0016123: xanthophyll biosynthetic process9.36E-05
26GO:0009768: photosynthesis, light harvesting in photosystem I1.29E-04
27GO:0009793: embryo development ending in seed dormancy1.31E-04
28GO:0010190: cytochrome b6f complex assembly1.36E-04
29GO:0046855: inositol phosphate dephosphorylation1.36E-04
30GO:0010114: response to red light2.29E-04
31GO:0010196: nonphotochemical quenching2.42E-04
32GO:0006419: alanyl-tRNA aminoacylation3.02E-04
33GO:0009443: pyridoxal 5'-phosphate salvage3.02E-04
34GO:0031426: polycistronic mRNA processing3.02E-04
35GO:1904966: positive regulation of vitamin E biosynthetic process3.02E-04
36GO:0033388: putrescine biosynthetic process from arginine3.02E-04
37GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.02E-04
38GO:1990052: ER to chloroplast lipid transport3.02E-04
39GO:0000481: maturation of 5S rRNA3.02E-04
40GO:0071277: cellular response to calcium ion3.02E-04
41GO:1904964: positive regulation of phytol biosynthetic process3.02E-04
42GO:0006436: tryptophanyl-tRNA aminoacylation3.02E-04
43GO:0010028: xanthophyll cycle3.02E-04
44GO:0034337: RNA folding3.02E-04
45GO:0048564: photosystem I assembly3.05E-04
46GO:0009642: response to light intensity3.05E-04
47GO:0010275: NAD(P)H dehydrogenase complex assembly6.60E-04
48GO:0046741: transport of virus in host, tissue to tissue6.60E-04
49GO:0009629: response to gravity6.60E-04
50GO:0080005: photosystem stoichiometry adjustment6.60E-04
51GO:1902326: positive regulation of chlorophyll biosynthetic process6.60E-04
52GO:0030187: melatonin biosynthetic process6.60E-04
53GO:0006432: phenylalanyl-tRNA aminoacylation6.60E-04
54GO:0000256: allantoin catabolic process6.60E-04
55GO:0006435: threonyl-tRNA aminoacylation6.60E-04
56GO:0009446: putrescine biosynthetic process6.60E-04
57GO:0006729: tetrahydrobiopterin biosynthetic process6.60E-04
58GO:0006568: tryptophan metabolic process6.60E-04
59GO:0030388: fructose 1,6-bisphosphate metabolic process6.60E-04
60GO:0006790: sulfur compound metabolic process8.22E-04
61GO:0010020: chloroplast fission1.04E-03
62GO:0019253: reductive pentose-phosphate cycle1.04E-03
63GO:0006000: fructose metabolic process1.07E-03
64GO:0010136: ureide catabolic process1.07E-03
65GO:0009405: pathogenesis1.07E-03
66GO:0006013: mannose metabolic process1.07E-03
67GO:0051604: protein maturation1.07E-03
68GO:0071492: cellular response to UV-A1.07E-03
69GO:0005977: glycogen metabolic process1.07E-03
70GO:0019853: L-ascorbic acid biosynthetic process1.17E-03
71GO:0046854: phosphatidylinositol phosphorylation1.17E-03
72GO:0009637: response to blue light1.18E-03
73GO:0010239: chloroplast mRNA processing1.53E-03
74GO:0009052: pentose-phosphate shunt, non-oxidative branch1.53E-03
75GO:0006809: nitric oxide biosynthetic process1.53E-03
76GO:0006145: purine nucleobase catabolic process1.53E-03
77GO:0051016: barbed-end actin filament capping1.53E-03
78GO:0046739: transport of virus in multicellular host1.53E-03
79GO:0042989: sequestering of actin monomers1.53E-03
80GO:0043572: plastid fission1.53E-03
81GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis1.53E-03
82GO:2001141: regulation of RNA biosynthetic process1.53E-03
83GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.53E-03
84GO:0006020: inositol metabolic process1.53E-03
85GO:0009644: response to high light intensity1.80E-03
86GO:0009765: photosynthesis, light harvesting2.06E-03
87GO:0015994: chlorophyll metabolic process2.06E-03
88GO:0006546: glycine catabolic process2.06E-03
89GO:0010021: amylopectin biosynthetic process2.06E-03
90GO:0071486: cellular response to high light intensity2.06E-03
91GO:0016558: protein import into peroxisome matrix2.63E-03
92GO:0030041: actin filament polymerization2.63E-03
93GO:0006564: L-serine biosynthetic process2.63E-03
94GO:0009658: chloroplast organization2.87E-03
95GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.24E-03
96GO:0006655: phosphatidylglycerol biosynthetic process3.24E-03
97GO:0009117: nucleotide metabolic process3.24E-03
98GO:0009643: photosynthetic acclimation3.24E-03
99GO:0009791: post-embryonic development3.27E-03
100GO:0019252: starch biosynthetic process3.27E-03
101GO:0010193: response to ozone3.50E-03
102GO:1901259: chloroplast rRNA processing3.90E-03
103GO:0010189: vitamin E biosynthetic process3.90E-03
104GO:0080167: response to karrikin3.98E-03
105GO:0048528: post-embryonic root development4.60E-03
106GO:0009645: response to low light intensity stimulus4.60E-03
107GO:0006400: tRNA modification4.60E-03
108GO:0051510: regulation of unidimensional cell growth4.60E-03
109GO:0006401: RNA catabolic process4.60E-03
110GO:0006402: mRNA catabolic process5.35E-03
111GO:0009704: de-etiolation5.35E-03
112GO:0032508: DNA duplex unwinding5.35E-03
113GO:0031540: regulation of anthocyanin biosynthetic process5.35E-03
114GO:0009231: riboflavin biosynthetic process5.35E-03
115GO:0016559: peroxisome fission5.35E-03
116GO:0055114: oxidation-reduction process5.44E-03
117GO:0006002: fructose 6-phosphate metabolic process6.13E-03
118GO:0071482: cellular response to light stimulus6.13E-03
119GO:0032544: plastid translation6.13E-03
120GO:0017004: cytochrome complex assembly6.13E-03
121GO:0016311: dephosphorylation6.28E-03
122GO:0098656: anion transmembrane transport6.95E-03
123GO:0009821: alkaloid biosynthetic process6.95E-03
124GO:0090333: regulation of stomatal closure6.95E-03
125GO:0048507: meristem development6.95E-03
126GO:0006754: ATP biosynthetic process6.95E-03
127GO:0000373: Group II intron splicing6.95E-03
128GO:0010218: response to far red light7.29E-03
129GO:0006457: protein folding7.59E-03
130GO:0007568: aging7.65E-03
131GO:0031425: chloroplast RNA processing7.80E-03
132GO:0009853: photorespiration8.39E-03
133GO:0045036: protein targeting to chloroplast8.70E-03
134GO:0009773: photosynthetic electron transport in photosystem I9.63E-03
135GO:0072593: reactive oxygen species metabolic process9.63E-03
136GO:0043085: positive regulation of catalytic activity9.63E-03
137GO:0006352: DNA-templated transcription, initiation9.63E-03
138GO:0006415: translational termination9.63E-03
139GO:0018119: peptidyl-cysteine S-nitrosylation9.63E-03
140GO:0016024: CDP-diacylglycerol biosynthetic process1.06E-02
141GO:0005986: sucrose biosynthetic process1.16E-02
142GO:0006006: glucose metabolic process1.16E-02
143GO:0006807: nitrogen compound metabolic process1.16E-02
144GO:0006094: gluconeogenesis1.16E-02
145GO:0009767: photosynthetic electron transport chain1.16E-02
146GO:0046686: response to cadmium ion1.25E-02
147GO:0010207: photosystem II assembly1.26E-02
148GO:0090351: seedling development1.37E-02
149GO:0006364: rRNA processing1.46E-02
150GO:0006863: purine nucleobase transport1.48E-02
151GO:0010224: response to UV-B1.52E-02
152GO:0009863: salicylic acid mediated signaling pathway1.59E-02
153GO:0007010: cytoskeleton organization1.59E-02
154GO:0051302: regulation of cell division1.71E-02
155GO:0019953: sexual reproduction1.71E-02
156GO:0008299: isoprenoid biosynthetic process1.71E-02
157GO:0006418: tRNA aminoacylation for protein translation1.71E-02
158GO:0007017: microtubule-based process1.71E-02
159GO:0019915: lipid storage1.82E-02
160GO:0006012: galactose metabolic process2.07E-02
161GO:0006396: RNA processing2.15E-02
162GO:0009561: megagametogenesis2.20E-02
163GO:0016117: carotenoid biosynthetic process2.33E-02
164GO:0055085: transmembrane transport2.45E-02
165GO:0008033: tRNA processing2.46E-02
166GO:0000413: protein peptidyl-prolyl isomerization2.46E-02
167GO:0006662: glycerol ether metabolic process2.59E-02
168GO:0048868: pollen tube development2.59E-02
169GO:0008654: phospholipid biosynthetic process2.87E-02
170GO:0055072: iron ion homeostasis2.87E-02
171GO:0006397: mRNA processing2.96E-02
172GO:0000302: response to reactive oxygen species3.01E-02
173GO:0006635: fatty acid beta-oxidation3.01E-02
174GO:0016032: viral process3.16E-02
175GO:0006413: translational initiation3.36E-02
176GO:0007623: circadian rhythm3.61E-02
177GO:0009451: RNA modification3.69E-02
178GO:0009816: defense response to bacterium, incompatible interaction4.07E-02
179GO:0010468: regulation of gene expression4.30E-02
180GO:0048481: plant ovule development4.73E-02
181GO:0009817: defense response to fungus, incompatible interaction4.73E-02
182GO:0009813: flavonoid biosynthetic process4.90E-02
RankGO TermAdjusted P value
1GO:0004059: aralkylamine N-acetyltransferase activity0.00E+00
2GO:0043136: glycerol-3-phosphatase activity0.00E+00
3GO:0000121: glycerol-1-phosphatase activity0.00E+00
4GO:0010349: L-galactose dehydrogenase activity0.00E+00
5GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
6GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
7GO:0016210: naringenin-chalcone synthase activity0.00E+00
8GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
9GO:0010276: phytol kinase activity0.00E+00
10GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
11GO:0045435: lycopene epsilon cyclase activity0.00E+00
12GO:0004760: serine-pyruvate transaminase activity0.00E+00
13GO:0042623: ATPase activity, coupled0.00E+00
14GO:0015229: L-ascorbic acid transporter activity0.00E+00
15GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
16GO:0050126: N-carbamoylputrescine amidase activity0.00E+00
17GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
18GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
19GO:0050281: serine-glyoxylate transaminase activity0.00E+00
20GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity0.00E+00
21GO:0016168: chlorophyll binding1.16E-07
22GO:0052832: inositol monophosphate 3-phosphatase activity4.15E-06
23GO:0008934: inositol monophosphate 1-phosphatase activity4.15E-06
24GO:0052833: inositol monophosphate 4-phosphatase activity4.15E-06
25GO:0070402: NADPH binding1.48E-05
26GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.93E-05
27GO:0031409: pigment binding9.50E-05
28GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.85E-04
29GO:0022891: substrate-specific transmembrane transporter activity1.91E-04
30GO:0008080: N-acetyltransferase activity2.97E-04
31GO:0004425: indole-3-glycerol-phosphate synthase activity3.02E-04
32GO:0004813: alanine-tRNA ligase activity3.02E-04
33GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity3.02E-04
34GO:0004830: tryptophan-tRNA ligase activity3.02E-04
35GO:0030941: chloroplast targeting sequence binding3.02E-04
36GO:0004654: polyribonucleotide nucleotidyltransferase activity3.02E-04
37GO:0010347: L-galactose-1-phosphate phosphatase activity3.02E-04
38GO:0016784: 3-mercaptopyruvate sulfurtransferase activity3.02E-04
39GO:0035671: enone reductase activity3.02E-04
40GO:0004033: aldo-keto reductase (NADP) activity3.05E-04
41GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity6.60E-04
42GO:0004829: threonine-tRNA ligase activity6.60E-04
43GO:0019172: glyoxalase III activity6.60E-04
44GO:0019156: isoamylase activity6.60E-04
45GO:0004826: phenylalanine-tRNA ligase activity6.60E-04
46GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity6.60E-04
47GO:0047746: chlorophyllase activity6.60E-04
48GO:0004617: phosphoglycerate dehydrogenase activity6.60E-04
49GO:0004047: aminomethyltransferase activity6.60E-04
50GO:0000049: tRNA binding8.22E-04
51GO:0031072: heat shock protein binding9.29E-04
52GO:0004148: dihydrolipoyl dehydrogenase activity1.07E-03
53GO:0004751: ribose-5-phosphate isomerase activity1.07E-03
54GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.07E-03
55GO:0005528: FK506 binding1.44E-03
56GO:0035529: NADH pyrophosphatase activity1.53E-03
57GO:0048027: mRNA 5'-UTR binding1.53E-03
58GO:0004792: thiosulfate sulfurtransferase activity1.53E-03
59GO:0016149: translation release factor activity, codon specific1.53E-03
60GO:0016851: magnesium chelatase activity1.53E-03
61GO:0008453: alanine-glyoxylate transaminase activity2.06E-03
62GO:0004045: aminoacyl-tRNA hydrolase activity2.06E-03
63GO:0016987: sigma factor activity2.06E-03
64GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.06E-03
65GO:0043495: protein anchor2.06E-03
66GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity2.06E-03
67GO:0001053: plastid sigma factor activity2.06E-03
68GO:0005319: lipid transporter activity2.06E-03
69GO:0051861: glycolipid binding2.06E-03
70GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.06E-03
71GO:0003785: actin monomer binding2.63E-03
72GO:0046872: metal ion binding2.84E-03
73GO:0016853: isomerase activity3.05E-03
74GO:0004556: alpha-amylase activity3.24E-03
75GO:0004462: lactoylglutathione lyase activity3.24E-03
76GO:0016462: pyrophosphatase activity3.24E-03
77GO:0042578: phosphoric ester hydrolase activity3.24E-03
78GO:0004605: phosphatidate cytidylyltransferase activity3.24E-03
79GO:0008195: phosphatidate phosphatase activity3.90E-03
80GO:0004559: alpha-mannosidase activity3.90E-03
81GO:0019899: enzyme binding4.60E-03
82GO:0016597: amino acid binding4.78E-03
83GO:0019843: rRNA binding4.97E-03
84GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism6.95E-03
85GO:0003747: translation release factor activity6.95E-03
86GO:0045309: protein phosphorylated amino acid binding7.80E-03
87GO:0016844: strictosidine synthase activity7.80E-03
88GO:0003746: translation elongation factor activity8.39E-03
89GO:0008047: enzyme activator activity8.70E-03
90GO:0003993: acid phosphatase activity8.77E-03
91GO:0019904: protein domain specific binding9.63E-03
92GO:0000175: 3'-5'-exoribonuclease activity1.16E-02
93GO:0005315: inorganic phosphate transmembrane transporter activity1.16E-02
94GO:0051537: 2 iron, 2 sulfur cluster binding1.17E-02
95GO:0051287: NAD binding1.31E-02
96GO:0008233: peptidase activity1.68E-02
97GO:0043424: protein histidine kinase binding1.71E-02
98GO:0005345: purine nucleobase transmembrane transporter activity1.71E-02
99GO:0004176: ATP-dependent peptidase activity1.82E-02
100GO:0003779: actin binding2.03E-02
101GO:0051082: unfolded protein binding2.09E-02
102GO:0003727: single-stranded RNA binding2.20E-02
103GO:0008514: organic anion transmembrane transporter activity2.20E-02
104GO:0047134: protein-disulfide reductase activity2.33E-02
105GO:0004812: aminoacyl-tRNA ligase activity2.33E-02
106GO:0016491: oxidoreductase activity2.62E-02
107GO:0003723: RNA binding2.70E-02
108GO:0004791: thioredoxin-disulfide reductase activity2.73E-02
109GO:0003924: GTPase activity2.80E-02
110GO:0048038: quinone binding3.01E-02
111GO:0009055: electron carrier activity3.06E-02
112GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.31E-02
113GO:0008483: transaminase activity3.61E-02
114GO:0003743: translation initiation factor activity4.21E-02
115GO:0008236: serine-type peptidase activity4.56E-02
116GO:0042802: identical protein binding4.57E-02
117GO:0016887: ATPase activity4.81E-02
RankGO TermAdjusted P value
1GO:0010368: chloroplast isoamylase complex0.00E+00
2GO:0009515: granal stacked thylakoid0.00E+00
3GO:0009349: riboflavin synthase complex0.00E+00
4GO:0009507: chloroplast9.50E-75
5GO:0009535: chloroplast thylakoid membrane1.46E-34
6GO:0009570: chloroplast stroma3.22E-26
7GO:0009534: chloroplast thylakoid2.19E-21
8GO:0009941: chloroplast envelope7.01E-21
9GO:0009579: thylakoid8.67E-14
10GO:0009543: chloroplast thylakoid lumen1.35E-13
11GO:0031977: thylakoid lumen1.06E-09
12GO:0010287: plastoglobule1.28E-05
13GO:0009523: photosystem II2.46E-05
14GO:0009654: photosystem II oxygen evolving complex1.29E-04
15GO:0031969: chloroplast membrane1.78E-04
16GO:0009782: photosystem I antenna complex3.02E-04
17GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)4.52E-04
18GO:0042644: chloroplast nucleoid4.52E-04
19GO:0008290: F-actin capping protein complex6.60E-04
20GO:0009707: chloroplast outer membrane8.83E-04
21GO:0030095: chloroplast photosystem II1.04E-03
22GO:0010007: magnesium chelatase complex1.07E-03
23GO:0030076: light-harvesting complex1.17E-03
24GO:0042646: plastid nucleoid1.53E-03
25GO:0009526: plastid envelope2.06E-03
26GO:0030286: dynein complex2.06E-03
27GO:0055035: plastid thylakoid membrane2.63E-03
28GO:0009522: photosystem I3.05E-03
29GO:0019898: extrinsic component of membrane3.27E-03
30GO:0005778: peroxisomal membrane4.51E-03
31GO:0009533: chloroplast stromal thylakoid4.60E-03
32GO:0031359: integral component of chloroplast outer membrane4.60E-03
33GO:0009538: photosystem I reaction center5.35E-03
34GO:0009539: photosystem II reaction center6.13E-03
35GO:0005759: mitochondrial matrix6.64E-03
36GO:0012511: monolayer-surrounded lipid storage body9.63E-03
37GO:0032040: small-subunit processome1.06E-02
38GO:0009508: plastid chromosome1.16E-02
39GO:0005938: cell cortex1.16E-02
40GO:0005875: microtubule associated complex1.48E-02
41GO:0042651: thylakoid membrane1.71E-02
42GO:0045271: respiratory chain complex I1.71E-02
43GO:0005747: mitochondrial respiratory chain complex I1.79E-02
44GO:0015629: actin cytoskeleton2.07E-02
45GO:0009706: chloroplast inner membrane2.09E-02
46GO:0016020: membrane2.25E-02
47GO:0048046: apoplast2.58E-02
48GO:0005623: cell2.69E-02
49GO:0009295: nucleoid3.61E-02
50GO:0010319: stromule3.61E-02
51GO:0030529: intracellular ribonucleoprotein complex3.92E-02
52GO:0016021: integral component of membrane4.95E-02
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Gene type



Gene DE type