GO Enrichment Analysis of Co-expressed Genes with
AT1G70580
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 2 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 3 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 4 | GO:0098586: cellular response to virus | 0.00E+00 |
| 5 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 6 | GO:0009304: tRNA transcription | 0.00E+00 |
| 7 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 8 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 9 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 10 | GO:0051246: regulation of protein metabolic process | 0.00E+00 |
| 11 | GO:0019447: D-cysteine catabolic process | 0.00E+00 |
| 12 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 13 | GO:0005997: xylulose metabolic process | 0.00E+00 |
| 14 | GO:0009902: chloroplast relocation | 1.40E-05 |
| 15 | GO:0055114: oxidation-reduction process | 2.14E-05 |
| 16 | GO:0009643: photosynthetic acclimation | 3.44E-05 |
| 17 | GO:0009658: chloroplast organization | 5.61E-05 |
| 18 | GO:0009735: response to cytokinin | 8.05E-05 |
| 19 | GO:0009657: plastid organization | 1.07E-04 |
| 20 | GO:0010028: xanthophyll cycle | 1.30E-04 |
| 21 | GO:0010362: negative regulation of anion channel activity by blue light | 1.30E-04 |
| 22 | GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.30E-04 |
| 23 | GO:0051775: response to redox state | 1.30E-04 |
| 24 | GO:0071277: cellular response to calcium ion | 1.30E-04 |
| 25 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.30E-04 |
| 26 | GO:0015995: chlorophyll biosynthetic process | 1.61E-04 |
| 27 | GO:0018298: protein-chromophore linkage | 1.86E-04 |
| 28 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.19E-04 |
| 29 | GO:0007623: circadian rhythm | 2.30E-04 |
| 30 | GO:0005986: sucrose biosynthetic process | 2.89E-04 |
| 31 | GO:0016122: xanthophyll metabolic process | 2.99E-04 |
| 32 | GO:0046741: transport of virus in host, tissue to tissue | 2.99E-04 |
| 33 | GO:0009915: phloem sucrose loading | 2.99E-04 |
| 34 | GO:2000030: regulation of response to red or far red light | 2.99E-04 |
| 35 | GO:0042548: regulation of photosynthesis, light reaction | 2.99E-04 |
| 36 | GO:0006435: threonyl-tRNA aminoacylation | 2.99E-04 |
| 37 | GO:0019752: carboxylic acid metabolic process | 2.99E-04 |
| 38 | GO:0030187: melatonin biosynthetic process | 2.99E-04 |
| 39 | GO:0000256: allantoin catabolic process | 2.99E-04 |
| 40 | GO:0019253: reductive pentose-phosphate cycle | 3.27E-04 |
| 41 | GO:0009644: response to high light intensity | 4.01E-04 |
| 42 | GO:0005977: glycogen metabolic process | 4.92E-04 |
| 43 | GO:0009405: pathogenesis | 4.92E-04 |
| 44 | GO:0090391: granum assembly | 4.92E-04 |
| 45 | GO:0010136: ureide catabolic process | 4.92E-04 |
| 46 | GO:0071836: nectar secretion | 4.92E-04 |
| 47 | GO:0071484: cellular response to light intensity | 7.04E-04 |
| 48 | GO:0006107: oxaloacetate metabolic process | 7.04E-04 |
| 49 | GO:0006809: nitric oxide biosynthetic process | 7.04E-04 |
| 50 | GO:0006145: purine nucleobase catabolic process | 7.04E-04 |
| 51 | GO:0046739: transport of virus in multicellular host | 7.04E-04 |
| 52 | GO:0043572: plastid fission | 7.04E-04 |
| 53 | GO:0015979: photosynthesis | 7.85E-04 |
| 54 | GO:0015994: chlorophyll metabolic process | 9.34E-04 |
| 55 | GO:0006734: NADH metabolic process | 9.34E-04 |
| 56 | GO:0010021: amylopectin biosynthetic process | 9.34E-04 |
| 57 | GO:0009791: post-embryonic development | 1.02E-03 |
| 58 | GO:0019761: glucosinolate biosynthetic process | 1.15E-03 |
| 59 | GO:0046686: response to cadmium ion | 1.15E-03 |
| 60 | GO:0043097: pyrimidine nucleoside salvage | 1.18E-03 |
| 61 | GO:0010117: photoprotection | 1.18E-03 |
| 62 | GO:0006206: pyrimidine nucleobase metabolic process | 1.45E-03 |
| 63 | GO:0009648: photoperiodism | 1.73E-03 |
| 64 | GO:0071470: cellular response to osmotic stress | 1.73E-03 |
| 65 | GO:0010189: vitamin E biosynthetic process | 1.73E-03 |
| 66 | GO:0006979: response to oxidative stress | 2.01E-03 |
| 67 | GO:0048528: post-embryonic root development | 2.04E-03 |
| 68 | GO:0006811: ion transport | 2.21E-03 |
| 69 | GO:0048564: photosystem I assembly | 2.36E-03 |
| 70 | GO:0009642: response to light intensity | 2.36E-03 |
| 71 | GO:0009704: de-etiolation | 2.36E-03 |
| 72 | GO:0009637: response to blue light | 2.54E-03 |
| 73 | GO:0009932: cell tip growth | 2.69E-03 |
| 74 | GO:0009416: response to light stimulus | 2.74E-03 |
| 75 | GO:0098656: anion transmembrane transport | 3.04E-03 |
| 76 | GO:0009821: alkaloid biosynthetic process | 3.04E-03 |
| 77 | GO:0010206: photosystem II repair | 3.04E-03 |
| 78 | GO:0090333: regulation of stomatal closure | 3.04E-03 |
| 79 | GO:0000373: Group II intron splicing | 3.04E-03 |
| 80 | GO:0010114: response to red light | 3.26E-03 |
| 81 | GO:0009638: phototropism | 3.41E-03 |
| 82 | GO:0009098: leucine biosynthetic process | 3.41E-03 |
| 83 | GO:0045036: protein targeting to chloroplast | 3.79E-03 |
| 84 | GO:0009641: shade avoidance | 3.79E-03 |
| 85 | GO:0006259: DNA metabolic process | 3.79E-03 |
| 86 | GO:0009970: cellular response to sulfate starvation | 3.79E-03 |
| 87 | GO:0006995: cellular response to nitrogen starvation | 3.79E-03 |
| 88 | GO:0016485: protein processing | 4.18E-03 |
| 89 | GO:0009773: photosynthetic electron transport in photosystem I | 4.18E-03 |
| 90 | GO:0006265: DNA topological change | 4.18E-03 |
| 91 | GO:0006813: potassium ion transport | 4.38E-03 |
| 92 | GO:0009767: photosynthetic electron transport chain | 5.00E-03 |
| 93 | GO:0006108: malate metabolic process | 5.00E-03 |
| 94 | GO:0006006: glucose metabolic process | 5.00E-03 |
| 95 | GO:0010223: secondary shoot formation | 5.44E-03 |
| 96 | GO:0009266: response to temperature stimulus | 5.44E-03 |
| 97 | GO:0010020: chloroplast fission | 5.44E-03 |
| 98 | GO:0010207: photosystem II assembly | 5.44E-03 |
| 99 | GO:0080147: root hair cell development | 6.81E-03 |
| 100 | GO:0051302: regulation of cell division | 7.30E-03 |
| 101 | GO:0007017: microtubule-based process | 7.30E-03 |
| 102 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.30E-03 |
| 103 | GO:0009058: biosynthetic process | 8.21E-03 |
| 104 | GO:0009625: response to insect | 8.82E-03 |
| 105 | GO:0009693: ethylene biosynthetic process | 8.82E-03 |
| 106 | GO:0006413: translational initiation | 1.00E-02 |
| 107 | GO:0010118: stomatal movement | 1.04E-02 |
| 108 | GO:0006606: protein import into nucleus | 1.04E-02 |
| 109 | GO:0010197: polar nucleus fusion | 1.10E-02 |
| 110 | GO:0007059: chromosome segregation | 1.16E-02 |
| 111 | GO:0019252: starch biosynthetic process | 1.22E-02 |
| 112 | GO:0009409: response to cold | 1.26E-02 |
| 113 | GO:0010193: response to ozone | 1.28E-02 |
| 114 | GO:0000302: response to reactive oxygen species | 1.28E-02 |
| 115 | GO:0016032: viral process | 1.34E-02 |
| 116 | GO:0030163: protein catabolic process | 1.40E-02 |
| 117 | GO:0071805: potassium ion transmembrane transport | 1.53E-02 |
| 118 | GO:0010027: thylakoid membrane organization | 1.66E-02 |
| 119 | GO:0009816: defense response to bacterium, incompatible interaction | 1.73E-02 |
| 120 | GO:0008219: cell death | 2.00E-02 |
| 121 | GO:0080167: response to karrikin | 2.07E-02 |
| 122 | GO:0000160: phosphorelay signal transduction system | 2.07E-02 |
| 123 | GO:0009407: toxin catabolic process | 2.15E-02 |
| 124 | GO:0010218: response to far red light | 2.15E-02 |
| 125 | GO:0007568: aging | 2.22E-02 |
| 126 | GO:0009853: photorespiration | 2.37E-02 |
| 127 | GO:0006099: tricarboxylic acid cycle | 2.45E-02 |
| 128 | GO:0034599: cellular response to oxidative stress | 2.45E-02 |
| 129 | GO:0045454: cell redox homeostasis | 2.48E-02 |
| 130 | GO:0006631: fatty acid metabolic process | 2.68E-02 |
| 131 | GO:0042542: response to hydrogen peroxide | 2.76E-02 |
| 132 | GO:0009744: response to sucrose | 2.84E-02 |
| 133 | GO:0009636: response to toxic substance | 3.08E-02 |
| 134 | GO:0031347: regulation of defense response | 3.25E-02 |
| 135 | GO:0006364: rRNA processing | 3.51E-02 |
| 136 | GO:0009585: red, far-red light phototransduction | 3.51E-02 |
| 137 | GO:0006417: regulation of translation | 3.77E-02 |
| 138 | GO:0006096: glycolytic process | 3.95E-02 |
| 139 | GO:0009624: response to nematode | 4.51E-02 |
| 140 | GO:0006396: RNA processing | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 2 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 3 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 4 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 5 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 6 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 7 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 8 | GO:0009976: tocopherol cyclase activity | 0.00E+00 |
| 9 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 10 | GO:0008660: 1-aminocyclopropane-1-carboxylate deaminase activity | 0.00E+00 |
| 11 | GO:0019148: D-cysteine desulfhydrase activity | 0.00E+00 |
| 12 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 13 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 14 | GO:0003858: 3-hydroxybutyrate dehydrogenase activity | 0.00E+00 |
| 15 | GO:0000293: ferric-chelate reductase activity | 3.44E-05 |
| 16 | GO:0030941: chloroplast targeting sequence binding | 1.30E-04 |
| 17 | GO:0035671: enone reductase activity | 1.30E-04 |
| 18 | GO:0004451: isocitrate lyase activity | 1.30E-04 |
| 19 | GO:0010177: 2-(2'-methylthio)ethylmalate synthase activity | 1.30E-04 |
| 20 | GO:0004856: xylulokinase activity | 1.30E-04 |
| 21 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.30E-04 |
| 22 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.30E-04 |
| 23 | GO:0016491: oxidoreductase activity | 1.90E-04 |
| 24 | GO:0050897: cobalt ion binding | 2.28E-04 |
| 25 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.99E-04 |
| 26 | GO:0004829: threonine-tRNA ligase activity | 2.99E-04 |
| 27 | GO:0019156: isoamylase activity | 2.99E-04 |
| 28 | GO:0003862: 3-isopropylmalate dehydrogenase activity | 2.99E-04 |
| 29 | GO:0070402: NADPH binding | 4.92E-04 |
| 30 | GO:0008430: selenium binding | 4.92E-04 |
| 31 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 4.92E-04 |
| 32 | GO:0046524: sucrose-phosphate synthase activity | 4.92E-04 |
| 33 | GO:0003913: DNA photolyase activity | 4.92E-04 |
| 34 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.92E-04 |
| 35 | GO:0050307: sucrose-phosphate phosphatase activity | 4.92E-04 |
| 36 | GO:0030267: glyoxylate reductase (NADP) activity | 4.92E-04 |
| 37 | GO:0004096: catalase activity | 4.92E-04 |
| 38 | GO:0015079: potassium ion transmembrane transporter activity | 5.01E-04 |
| 39 | GO:0009882: blue light photoreceptor activity | 7.04E-04 |
| 40 | GO:0016851: magnesium chelatase activity | 7.04E-04 |
| 41 | GO:0022890: inorganic cation transmembrane transporter activity | 7.04E-04 |
| 42 | GO:0051861: glycolipid binding | 9.34E-04 |
| 43 | GO:0008453: alanine-glyoxylate transaminase activity | 9.34E-04 |
| 44 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 9.34E-04 |
| 45 | GO:0016853: isomerase activity | 9.50E-04 |
| 46 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.18E-03 |
| 47 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 1.18E-03 |
| 48 | GO:0016615: malate dehydrogenase activity | 1.45E-03 |
| 49 | GO:0004556: alpha-amylase activity | 1.45E-03 |
| 50 | GO:0016168: chlorophyll binding | 1.63E-03 |
| 51 | GO:0016157: sucrose synthase activity | 1.73E-03 |
| 52 | GO:0030060: L-malate dehydrogenase activity | 1.73E-03 |
| 53 | GO:0004849: uridine kinase activity | 1.73E-03 |
| 54 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.73E-03 |
| 55 | GO:0019899: enzyme binding | 2.04E-03 |
| 56 | GO:0004033: aldo-keto reductase (NADP) activity | 2.36E-03 |
| 57 | GO:0008135: translation factor activity, RNA binding | 2.69E-03 |
| 58 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.69E-03 |
| 59 | GO:0016844: strictosidine synthase activity | 3.41E-03 |
| 60 | GO:0045309: protein phosphorylated amino acid binding | 3.41E-03 |
| 61 | GO:0051287: NAD binding | 3.93E-03 |
| 62 | GO:0001054: RNA polymerase I activity | 4.18E-03 |
| 63 | GO:0015386: potassium:proton antiporter activity | 4.18E-03 |
| 64 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 4.18E-03 |
| 65 | GO:0019904: protein domain specific binding | 4.18E-03 |
| 66 | GO:0001056: RNA polymerase III activity | 4.58E-03 |
| 67 | GO:0000155: phosphorelay sensor kinase activity | 5.00E-03 |
| 68 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.00E-03 |
| 69 | GO:0003924: GTPase activity | 6.08E-03 |
| 70 | GO:0031409: pigment binding | 6.34E-03 |
| 71 | GO:0022891: substrate-specific transmembrane transporter activity | 8.82E-03 |
| 72 | GO:0003727: single-stranded RNA binding | 9.35E-03 |
| 73 | GO:0008514: organic anion transmembrane transporter activity | 9.35E-03 |
| 74 | GO:0016887: ATPase activity | 1.06E-02 |
| 75 | GO:0008080: N-acetyltransferase activity | 1.10E-02 |
| 76 | GO:0015299: solute:proton antiporter activity | 1.16E-02 |
| 77 | GO:0010181: FMN binding | 1.16E-02 |
| 78 | GO:0000287: magnesium ion binding | 1.64E-02 |
| 79 | GO:0008236: serine-type peptidase activity | 1.93E-02 |
| 80 | GO:0005507: copper ion binding | 1.97E-02 |
| 81 | GO:0005525: GTP binding | 2.36E-02 |
| 82 | GO:0003746: translation elongation factor activity | 2.37E-02 |
| 83 | GO:0004364: glutathione transferase activity | 2.76E-02 |
| 84 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.00E-02 |
| 85 | GO:0043621: protein self-association | 3.00E-02 |
| 86 | GO:0009055: electron carrier activity | 3.28E-02 |
| 87 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.51E-02 |
| 88 | GO:0016874: ligase activity | 4.32E-02 |
| 89 | GO:0016746: transferase activity, transferring acyl groups | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 9.46E-37 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 6.33E-16 |
| 3 | GO:0009570: chloroplast stroma | 6.20E-13 |
| 4 | GO:0009941: chloroplast envelope | 5.23E-11 |
| 5 | GO:0009534: chloroplast thylakoid | 1.05E-08 |
| 6 | GO:0009579: thylakoid | 1.51E-07 |
| 7 | GO:0010319: stromule | 4.02E-06 |
| 8 | GO:0009706: chloroplast inner membrane | 5.33E-06 |
| 9 | GO:0010287: plastoglobule | 1.20E-04 |
| 10 | GO:0009707: chloroplast outer membrane | 1.86E-04 |
| 11 | GO:0031977: thylakoid lumen | 3.25E-04 |
| 12 | GO:0010007: magnesium chelatase complex | 4.92E-04 |
| 13 | GO:0042651: thylakoid membrane | 5.01E-04 |
| 14 | GO:0048046: apoplast | 5.76E-04 |
| 15 | GO:0031969: chloroplast membrane | 6.43E-04 |
| 16 | GO:0030286: dynein complex | 9.34E-04 |
| 17 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 9.34E-04 |
| 18 | GO:0009523: photosystem II | 1.02E-03 |
| 19 | GO:0009543: chloroplast thylakoid lumen | 1.09E-03 |
| 20 | GO:0031359: integral component of chloroplast outer membrane | 2.04E-03 |
| 21 | GO:0009514: glyoxysome | 2.69E-03 |
| 22 | GO:0005736: DNA-directed RNA polymerase I complex | 3.04E-03 |
| 23 | GO:0005666: DNA-directed RNA polymerase III complex | 3.41E-03 |
| 24 | GO:0009654: photosystem II oxygen evolving complex | 7.30E-03 |
| 25 | GO:0009532: plastid stroma | 7.79E-03 |
| 26 | GO:0009522: photosystem I | 1.16E-02 |
| 27 | GO:0019898: extrinsic component of membrane | 1.22E-02 |
| 28 | GO:0009295: nucleoid | 1.53E-02 |
| 29 | GO:0009536: plastid | 3.94E-02 |
| 30 | GO:0005747: mitochondrial respiratory chain complex I | 4.04E-02 |
| 31 | GO:0005829: cytosol | 4.52E-02 |