GO Enrichment Analysis of Co-expressed Genes with
AT1G69700
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009661: chromoplast organization | 0.00E+00 |
| 2 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 3 | GO:0010190: cytochrome b6f complex assembly | 1.95E-05 |
| 4 | GO:0015995: chlorophyll biosynthetic process | 8.17E-05 |
| 5 | GO:0031426: polycistronic mRNA processing | 9.14E-05 |
| 6 | GO:0042371: vitamin K biosynthetic process | 9.14E-05 |
| 7 | GO:0071461: cellular response to redox state | 9.14E-05 |
| 8 | GO:0010362: negative regulation of anion channel activity by blue light | 9.14E-05 |
| 9 | GO:0018298: protein-chromophore linkage | 9.51E-05 |
| 10 | GO:0006898: receptor-mediated endocytosis | 2.16E-04 |
| 11 | GO:0080005: photosystem stoichiometry adjustment | 2.16E-04 |
| 12 | GO:0007154: cell communication | 2.16E-04 |
| 13 | GO:0000256: allantoin catabolic process | 2.16E-04 |
| 14 | GO:1904143: positive regulation of carotenoid biosynthetic process | 2.16E-04 |
| 15 | GO:0009658: chloroplast organization | 2.16E-04 |
| 16 | GO:0006013: mannose metabolic process | 3.61E-04 |
| 17 | GO:0010136: ureide catabolic process | 3.61E-04 |
| 18 | GO:0006696: ergosterol biosynthetic process | 3.61E-04 |
| 19 | GO:0006168: adenine salvage | 5.20E-04 |
| 20 | GO:2001141: regulation of RNA biosynthetic process | 5.20E-04 |
| 21 | GO:0010371: regulation of gibberellin biosynthetic process | 5.20E-04 |
| 22 | GO:0006166: purine ribonucleoside salvage | 5.20E-04 |
| 23 | GO:0071484: cellular response to light intensity | 5.20E-04 |
| 24 | GO:0010239: chloroplast mRNA processing | 5.20E-04 |
| 25 | GO:0006145: purine nucleobase catabolic process | 5.20E-04 |
| 26 | GO:0009791: post-embryonic development | 6.49E-04 |
| 27 | GO:0071483: cellular response to blue light | 6.90E-04 |
| 28 | GO:0009902: chloroplast relocation | 6.90E-04 |
| 29 | GO:0010021: amylopectin biosynthetic process | 6.90E-04 |
| 30 | GO:0016120: carotene biosynthetic process | 8.73E-04 |
| 31 | GO:0010117: photoprotection | 8.73E-04 |
| 32 | GO:0009904: chloroplast accumulation movement | 8.73E-04 |
| 33 | GO:0044209: AMP salvage | 8.73E-04 |
| 34 | GO:0009903: chloroplast avoidance movement | 1.27E-03 |
| 35 | GO:0010019: chloroplast-nucleus signaling pathway | 1.27E-03 |
| 36 | GO:0009648: photoperiodism | 1.27E-03 |
| 37 | GO:0050821: protein stabilization | 1.72E-03 |
| 38 | GO:0048564: photosystem I assembly | 1.72E-03 |
| 39 | GO:0010100: negative regulation of photomorphogenesis | 1.96E-03 |
| 40 | GO:0071482: cellular response to light stimulus | 1.96E-03 |
| 41 | GO:0048507: meristem development | 2.21E-03 |
| 42 | GO:0034765: regulation of ion transmembrane transport | 2.21E-03 |
| 43 | GO:0009644: response to high light intensity | 2.21E-03 |
| 44 | GO:0015979: photosynthesis | 2.41E-03 |
| 45 | GO:0009638: phototropism | 2.48E-03 |
| 46 | GO:0009098: leucine biosynthetic process | 2.48E-03 |
| 47 | GO:0045454: cell redox homeostasis | 2.56E-03 |
| 48 | GO:0045036: protein targeting to chloroplast | 2.75E-03 |
| 49 | GO:0006259: DNA metabolic process | 2.75E-03 |
| 50 | GO:0051555: flavonol biosynthetic process | 2.75E-03 |
| 51 | GO:0009970: cellular response to sulfate starvation | 2.75E-03 |
| 52 | GO:0006995: cellular response to nitrogen starvation | 2.75E-03 |
| 53 | GO:0006265: DNA topological change | 3.03E-03 |
| 54 | GO:0043085: positive regulation of catalytic activity | 3.03E-03 |
| 55 | GO:0006352: DNA-templated transcription, initiation | 3.03E-03 |
| 56 | GO:0016485: protein processing | 3.03E-03 |
| 57 | GO:0009773: photosynthetic electron transport in photosystem I | 3.03E-03 |
| 58 | GO:0008285: negative regulation of cell proliferation | 3.03E-03 |
| 59 | GO:0009767: photosynthetic electron transport chain | 3.63E-03 |
| 60 | GO:0005986: sucrose biosynthetic process | 3.63E-03 |
| 61 | GO:0010207: photosystem II assembly | 3.93E-03 |
| 62 | GO:0007015: actin filament organization | 3.93E-03 |
| 63 | GO:0006071: glycerol metabolic process | 4.58E-03 |
| 64 | GO:0010073: meristem maintenance | 5.27E-03 |
| 65 | GO:0016226: iron-sulfur cluster assembly | 5.98E-03 |
| 66 | GO:0010227: floral organ abscission | 6.35E-03 |
| 67 | GO:0007623: circadian rhythm | 6.70E-03 |
| 68 | GO:0009306: protein secretion | 6.73E-03 |
| 69 | GO:0010228: vegetative to reproductive phase transition of meristem | 7.01E-03 |
| 70 | GO:0016117: carotenoid biosynthetic process | 7.11E-03 |
| 71 | GO:0042391: regulation of membrane potential | 7.51E-03 |
| 72 | GO:0010118: stomatal movement | 7.51E-03 |
| 73 | GO:0006662: glycerol ether metabolic process | 7.91E-03 |
| 74 | GO:0010182: sugar mediated signaling pathway | 7.91E-03 |
| 75 | GO:0007059: chromosome segregation | 8.32E-03 |
| 76 | GO:0019252: starch biosynthetic process | 8.74E-03 |
| 77 | GO:0019761: glucosinolate biosynthetic process | 9.60E-03 |
| 78 | GO:0009567: double fertilization forming a zygote and endosperm | 1.05E-02 |
| 79 | GO:0071805: potassium ion transmembrane transport | 1.09E-02 |
| 80 | GO:0009816: defense response to bacterium, incompatible interaction | 1.23E-02 |
| 81 | GO:0010411: xyloglucan metabolic process | 1.33E-02 |
| 82 | GO:0008219: cell death | 1.43E-02 |
| 83 | GO:0000160: phosphorelay signal transduction system | 1.48E-02 |
| 84 | GO:0006811: ion transport | 1.54E-02 |
| 85 | GO:0009637: response to blue light | 1.69E-02 |
| 86 | GO:0034599: cellular response to oxidative stress | 1.75E-02 |
| 87 | GO:0006281: DNA repair | 1.91E-02 |
| 88 | GO:0042542: response to hydrogen peroxide | 1.97E-02 |
| 89 | GO:0009640: photomorphogenesis | 2.03E-02 |
| 90 | GO:0042546: cell wall biogenesis | 2.09E-02 |
| 91 | GO:0055114: oxidation-reduction process | 2.70E-02 |
| 92 | GO:0006096: glycolytic process | 2.82E-02 |
| 93 | GO:0046686: response to cadmium ion | 2.94E-02 |
| 94 | GO:0009735: response to cytokinin | 3.09E-02 |
| 95 | GO:0009624: response to nematode | 3.22E-02 |
| 96 | GO:0009416: response to light stimulus | 3.38E-02 |
| 97 | GO:0035556: intracellular signal transduction | 3.57E-02 |
| 98 | GO:0042744: hydrogen peroxide catabolic process | 4.15E-02 |
| 99 | GO:0016036: cellular response to phosphate starvation | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 2 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 3 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 4 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 5 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 6 | GO:0004180: carboxypeptidase activity | 1.70E-06 |
| 7 | GO:0003913: DNA photolyase activity | 1.70E-06 |
| 8 | GO:0016851: magnesium chelatase activity | 4.05E-06 |
| 9 | GO:0051996: squalene synthase activity | 9.14E-05 |
| 10 | GO:0004328: formamidase activity | 9.14E-05 |
| 11 | GO:0030941: chloroplast targeting sequence binding | 9.14E-05 |
| 12 | GO:0035671: enone reductase activity | 9.14E-05 |
| 13 | GO:0046906: tetrapyrrole binding | 9.14E-05 |
| 14 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 2.16E-04 |
| 15 | GO:0003862: 3-isopropylmalate dehydrogenase activity | 2.16E-04 |
| 16 | GO:0033201: alpha-1,4-glucan synthase activity | 2.16E-04 |
| 17 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 3.61E-04 |
| 18 | GO:0050307: sucrose-phosphate phosphatase activity | 3.61E-04 |
| 19 | GO:0004096: catalase activity | 3.61E-04 |
| 20 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.61E-04 |
| 21 | GO:0004373: glycogen (starch) synthase activity | 3.61E-04 |
| 22 | GO:0032947: protein complex scaffold | 3.61E-04 |
| 23 | GO:0004848: ureidoglycolate hydrolase activity | 3.61E-04 |
| 24 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.61E-04 |
| 25 | GO:0003999: adenine phosphoribosyltransferase activity | 5.20E-04 |
| 26 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 5.20E-04 |
| 27 | GO:0009882: blue light photoreceptor activity | 5.20E-04 |
| 28 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 5.20E-04 |
| 29 | GO:0048027: mRNA 5'-UTR binding | 5.20E-04 |
| 30 | GO:0010181: FMN binding | 6.07E-04 |
| 31 | GO:0009011: starch synthase activity | 6.90E-04 |
| 32 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 6.90E-04 |
| 33 | GO:0001053: plastid sigma factor activity | 6.90E-04 |
| 34 | GO:0051861: glycolipid binding | 6.90E-04 |
| 35 | GO:0016987: sigma factor activity | 6.90E-04 |
| 36 | GO:0004709: MAP kinase kinase kinase activity | 1.07E-03 |
| 37 | GO:0000293: ferric-chelate reductase activity | 1.07E-03 |
| 38 | GO:0008236: serine-type peptidase activity | 1.21E-03 |
| 39 | GO:0004559: alpha-mannosidase activity | 1.27E-03 |
| 40 | GO:0005242: inward rectifier potassium channel activity | 1.27E-03 |
| 41 | GO:0050897: cobalt ion binding | 1.46E-03 |
| 42 | GO:0019899: enzyme binding | 1.49E-03 |
| 43 | GO:0009881: photoreceptor activity | 1.49E-03 |
| 44 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.96E-03 |
| 45 | GO:0000989: transcription factor activity, transcription factor binding | 2.21E-03 |
| 46 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 2.21E-03 |
| 47 | GO:0019904: protein domain specific binding | 3.03E-03 |
| 48 | GO:0031072: heat shock protein binding | 3.63E-03 |
| 49 | GO:0000155: phosphorelay sensor kinase activity | 3.63E-03 |
| 50 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.93E-03 |
| 51 | GO:0051536: iron-sulfur cluster binding | 4.92E-03 |
| 52 | GO:0016887: ATPase activity | 5.80E-03 |
| 53 | GO:0022891: substrate-specific transmembrane transporter activity | 6.35E-03 |
| 54 | GO:0047134: protein-disulfide reductase activity | 7.11E-03 |
| 55 | GO:0005249: voltage-gated potassium channel activity | 7.51E-03 |
| 56 | GO:0030551: cyclic nucleotide binding | 7.51E-03 |
| 57 | GO:0008080: N-acetyltransferase activity | 7.91E-03 |
| 58 | GO:0004791: thioredoxin-disulfide reductase activity | 8.32E-03 |
| 59 | GO:0042802: identical protein binding | 8.51E-03 |
| 60 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 9.16E-03 |
| 61 | GO:0048038: quinone binding | 9.16E-03 |
| 62 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.00E-02 |
| 63 | GO:0000287: magnesium ion binding | 1.02E-02 |
| 64 | GO:0016791: phosphatase activity | 1.05E-02 |
| 65 | GO:0008237: metallopeptidase activity | 1.09E-02 |
| 66 | GO:0016168: chlorophyll binding | 1.23E-02 |
| 67 | GO:0030247: polysaccharide binding | 1.33E-02 |
| 68 | GO:0004721: phosphoprotein phosphatase activity | 1.33E-02 |
| 69 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.33E-02 |
| 70 | GO:0030145: manganese ion binding | 1.59E-02 |
| 71 | GO:0005506: iron ion binding | 1.65E-02 |
| 72 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.80E-02 |
| 73 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.14E-02 |
| 74 | GO:0005198: structural molecule activity | 2.20E-02 |
| 75 | GO:0051287: NAD binding | 2.32E-02 |
| 76 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.51E-02 |
| 77 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.89E-02 |
| 78 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.02E-02 |
| 79 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.02E-02 |
| 80 | GO:0051082: unfolded protein binding | 3.22E-02 |
| 81 | GO:0015035: protein disulfide oxidoreductase activity | 3.29E-02 |
| 82 | GO:0016746: transferase activity, transferring acyl groups | 3.29E-02 |
| 83 | GO:0005515: protein binding | 3.48E-02 |
| 84 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.85E-02 |
| 85 | GO:0008565: protein transporter activity | 4.30E-02 |
| 86 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.63E-16 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 3.70E-09 |
| 3 | GO:0045254: pyruvate dehydrogenase complex | 2.16E-04 |
| 4 | GO:0031969: chloroplast membrane | 3.07E-04 |
| 5 | GO:0033281: TAT protein transport complex | 3.61E-04 |
| 6 | GO:0010007: magnesium chelatase complex | 3.61E-04 |
| 7 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 6.90E-04 |
| 8 | GO:0009570: chloroplast stroma | 7.41E-04 |
| 9 | GO:0010319: stromule | 8.83E-04 |
| 10 | GO:0031359: integral component of chloroplast outer membrane | 1.49E-03 |
| 11 | GO:0005777: peroxisome | 1.64E-03 |
| 12 | GO:0031982: vesicle | 1.72E-03 |
| 13 | GO:0009501: amyloplast | 1.72E-03 |
| 14 | GO:0009579: thylakoid | 1.75E-03 |
| 15 | GO:0009534: chloroplast thylakoid | 1.77E-03 |
| 16 | GO:0009539: photosystem II reaction center | 1.96E-03 |
| 17 | GO:0009514: glyoxysome | 1.96E-03 |
| 18 | GO:0042644: chloroplast nucleoid | 2.21E-03 |
| 19 | GO:0010287: plastoglobule | 4.61E-03 |
| 20 | GO:0042651: thylakoid membrane | 5.27E-03 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 5.27E-03 |
| 22 | GO:0009536: plastid | 5.30E-03 |
| 23 | GO:0009532: plastid stroma | 5.62E-03 |
| 24 | GO:0005759: mitochondrial matrix | 6.10E-03 |
| 25 | GO:0005739: mitochondrion | 7.48E-03 |
| 26 | GO:0009523: photosystem II | 8.74E-03 |
| 27 | GO:0005778: peroxisomal membrane | 1.09E-02 |
| 28 | GO:0009295: nucleoid | 1.09E-02 |
| 29 | GO:0009707: chloroplast outer membrane | 1.43E-02 |
| 30 | GO:0005773: vacuole | 1.58E-02 |
| 31 | GO:0031977: thylakoid lumen | 1.91E-02 |
| 32 | GO:0048046: apoplast | 2.71E-02 |
| 33 | GO:0005747: mitochondrial respiratory chain complex I | 2.89E-02 |
| 34 | GO:0005618: cell wall | 3.08E-02 |
| 35 | GO:0009706: chloroplast inner membrane | 3.22E-02 |
| 36 | GO:0009543: chloroplast thylakoid lumen | 3.78E-02 |
| 37 | GO:0009941: chloroplast envelope | 3.94E-02 |