GO Enrichment Analysis of Co-expressed Genes with
AT1G69410
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1900409: positive regulation of cellular response to oxidative stress | 0.00E+00 |
| 2 | GO:1902325: negative regulation of chlorophyll biosynthetic process | 0.00E+00 |
| 3 | GO:0006412: translation | 5.39E-10 |
| 4 | GO:0022900: electron transport chain | 2.84E-05 |
| 5 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 5.48E-05 |
| 6 | GO:0030490: maturation of SSU-rRNA | 5.48E-05 |
| 7 | GO:0009820: alkaloid metabolic process | 5.48E-05 |
| 8 | GO:0010365: positive regulation of ethylene biosynthetic process | 5.48E-05 |
| 9 | GO:0042254: ribosome biogenesis | 6.73E-05 |
| 10 | GO:0006954: inflammatory response | 2.28E-04 |
| 11 | GO:0009413: response to flooding | 3.33E-04 |
| 12 | GO:0051365: cellular response to potassium ion starvation | 4.45E-04 |
| 13 | GO:0007029: endoplasmic reticulum organization | 5.66E-04 |
| 14 | GO:0009164: nucleoside catabolic process | 5.66E-04 |
| 15 | GO:0009228: thiamine biosynthetic process | 6.92E-04 |
| 16 | GO:0000054: ribosomal subunit export from nucleus | 8.25E-04 |
| 17 | GO:0010019: chloroplast-nucleus signaling pathway | 8.25E-04 |
| 18 | GO:1900057: positive regulation of leaf senescence | 9.62E-04 |
| 19 | GO:0006605: protein targeting | 1.11E-03 |
| 20 | GO:0000028: ribosomal small subunit assembly | 1.11E-03 |
| 21 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.11E-03 |
| 22 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.26E-03 |
| 23 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.26E-03 |
| 24 | GO:0007186: G-protein coupled receptor signaling pathway | 1.26E-03 |
| 25 | GO:2000280: regulation of root development | 1.58E-03 |
| 26 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 1.75E-03 |
| 27 | GO:0009682: induced systemic resistance | 1.93E-03 |
| 28 | GO:0006913: nucleocytoplasmic transport | 1.93E-03 |
| 29 | GO:0071365: cellular response to auxin stimulus | 2.11E-03 |
| 30 | GO:0006807: nitrogen compound metabolic process | 2.30E-03 |
| 31 | GO:0009887: animal organ morphogenesis | 2.49E-03 |
| 32 | GO:0009058: biosynthetic process | 2.63E-03 |
| 33 | GO:0042744: hydrogen peroxide catabolic process | 2.83E-03 |
| 34 | GO:0006413: translational initiation | 3.20E-03 |
| 35 | GO:0006874: cellular calcium ion homeostasis | 3.32E-03 |
| 36 | GO:0016998: cell wall macromolecule catabolic process | 3.54E-03 |
| 37 | GO:0015992: proton transport | 3.54E-03 |
| 38 | GO:0030245: cellulose catabolic process | 3.77E-03 |
| 39 | GO:0010017: red or far-red light signaling pathway | 3.77E-03 |
| 40 | GO:0007275: multicellular organism development | 3.84E-03 |
| 41 | GO:0010089: xylem development | 4.23E-03 |
| 42 | GO:0006606: protein import into nucleus | 4.71E-03 |
| 43 | GO:0006979: response to oxidative stress | 7.19E-03 |
| 44 | GO:0010029: regulation of seed germination | 7.69E-03 |
| 45 | GO:0006869: lipid transport | 8.58E-03 |
| 46 | GO:0045087: innate immune response | 1.05E-02 |
| 47 | GO:0046686: response to cadmium ion | 1.25E-02 |
| 48 | GO:0008283: cell proliferation | 1.26E-02 |
| 49 | GO:0051707: response to other organism | 1.26E-02 |
| 50 | GO:0009809: lignin biosynthetic process | 1.55E-02 |
| 51 | GO:0040008: regulation of growth | 2.85E-02 |
| 52 | GO:0006470: protein dephosphorylation | 3.24E-02 |
| 53 | GO:0008380: RNA splicing | 3.34E-02 |
| 54 | GO:0009733: response to auxin | 3.90E-02 |
| 55 | GO:0009723: response to ethylene | 4.45E-02 |
| 56 | GO:0009409: response to cold | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 3.21E-11 |
| 2 | GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H | 5.48E-05 |
| 3 | GO:0046906: tetrapyrrole binding | 5.48E-05 |
| 4 | GO:0019172: glyoxalase III activity | 1.34E-04 |
| 5 | GO:0004750: ribulose-phosphate 3-epimerase activity | 1.34E-04 |
| 6 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 2.28E-04 |
| 7 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 4.45E-04 |
| 8 | GO:0004930: G-protein coupled receptor activity | 4.45E-04 |
| 9 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.45E-04 |
| 10 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 6.92E-04 |
| 11 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 6.92E-04 |
| 12 | GO:0004656: procollagen-proline 4-dioxygenase activity | 8.25E-04 |
| 13 | GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 8.25E-04 |
| 14 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 9.62E-04 |
| 15 | GO:0008135: translation factor activity, RNA binding | 1.26E-03 |
| 16 | GO:0001055: RNA polymerase II activity | 1.58E-03 |
| 17 | GO:0001054: RNA polymerase I activity | 1.93E-03 |
| 18 | GO:0001056: RNA polymerase III activity | 2.11E-03 |
| 19 | GO:0008083: growth factor activity | 2.49E-03 |
| 20 | GO:0005217: intracellular ligand-gated ion channel activity | 2.70E-03 |
| 21 | GO:0004970: ionotropic glutamate receptor activity | 2.70E-03 |
| 22 | GO:0031418: L-ascorbic acid binding | 3.11E-03 |
| 23 | GO:0003743: translation initiation factor activity | 3.99E-03 |
| 24 | GO:0008810: cellulase activity | 4.00E-03 |
| 25 | GO:0010181: FMN binding | 5.22E-03 |
| 26 | GO:0004601: peroxidase activity | 5.28E-03 |
| 27 | GO:0004721: phosphoprotein phosphatase activity | 8.29E-03 |
| 28 | GO:0003924: GTPase activity | 9.65E-03 |
| 29 | GO:0030145: manganese ion binding | 9.86E-03 |
| 30 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.05E-02 |
| 31 | GO:0003729: mRNA binding | 1.18E-02 |
| 32 | GO:0008289: lipid binding | 1.35E-02 |
| 33 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.55E-02 |
| 34 | GO:0045735: nutrient reservoir activity | 1.75E-02 |
| 35 | GO:0046872: metal ion binding | 2.12E-02 |
| 36 | GO:0030170: pyridoxal phosphate binding | 2.52E-02 |
| 37 | GO:0005525: GTP binding | 2.83E-02 |
| 38 | GO:0008168: methyltransferase activity | 3.91E-02 |
| 39 | GO:0016788: hydrolase activity, acting on ester bonds | 4.07E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005840: ribosome | 1.05E-08 |
| 2 | GO:0022627: cytosolic small ribosomal subunit | 7.44E-08 |
| 3 | GO:0022625: cytosolic large ribosomal subunit | 2.79E-07 |
| 4 | GO:0022626: cytosolic ribosome | 3.85E-06 |
| 5 | GO:0005730: nucleolus | 1.40E-05 |
| 6 | GO:0005618: cell wall | 2.49E-05 |
| 7 | GO:0009506: plasmodesma | 2.04E-04 |
| 8 | GO:0005773: vacuole | 3.20E-04 |
| 9 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 4.45E-04 |
| 10 | GO:0005774: vacuolar membrane | 5.47E-04 |
| 11 | GO:0000974: Prp19 complex | 6.92E-04 |
| 12 | GO:0005736: DNA-directed RNA polymerase I complex | 1.41E-03 |
| 13 | GO:0005635: nuclear envelope | 1.52E-03 |
| 14 | GO:0005666: DNA-directed RNA polymerase III complex | 1.58E-03 |
| 15 | GO:0071011: precatalytic spliceosome | 1.58E-03 |
| 16 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.75E-03 |
| 17 | GO:0071013: catalytic step 2 spliceosome | 1.93E-03 |
| 18 | GO:0005665: DNA-directed RNA polymerase II, core complex | 2.11E-03 |
| 19 | GO:0005737: cytoplasm | 2.16E-03 |
| 20 | GO:0031012: extracellular matrix | 2.30E-03 |
| 21 | GO:0005750: mitochondrial respiratory chain complex III | 2.49E-03 |
| 22 | GO:0005623: cell | 2.56E-03 |
| 23 | GO:0030176: integral component of endoplasmic reticulum membrane | 2.70E-03 |
| 24 | GO:0000419: DNA-directed RNA polymerase V complex | 2.90E-03 |
| 25 | GO:0005741: mitochondrial outer membrane | 3.54E-03 |
| 26 | GO:0015935: small ribosomal subunit | 3.54E-03 |
| 27 | GO:0005794: Golgi apparatus | 4.67E-03 |
| 28 | GO:0031965: nuclear membrane | 5.48E-03 |
| 29 | GO:0005783: endoplasmic reticulum | 7.71E-03 |
| 30 | GO:0009707: chloroplast outer membrane | 8.91E-03 |
| 31 | GO:0048046: apoplast | 9.75E-03 |
| 32 | GO:0015934: large ribosomal subunit | 9.86E-03 |
| 33 | GO:0005829: cytosol | 1.01E-02 |
| 34 | GO:0005789: endoplasmic reticulum membrane | 1.22E-02 |
| 35 | GO:0005747: mitochondrial respiratory chain complex I | 1.79E-02 |
| 36 | GO:0016607: nuclear speck | 1.79E-02 |
| 37 | GO:0012505: endomembrane system | 1.95E-02 |
| 38 | GO:0005576: extracellular region | 2.15E-02 |
| 39 | GO:0005622: intracellular | 3.06E-02 |
| 40 | GO:0009505: plant-type cell wall | 4.35E-02 |