Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G69310

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090627: plant epidermal cell differentiation0.00E+00
2GO:0090279: regulation of calcium ion import0.00E+00
3GO:0005980: glycogen catabolic process0.00E+00
4GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
5GO:0080127: fruit septum development0.00E+00
6GO:0015717: triose phosphate transport0.00E+00
7GO:1905177: tracheary element differentiation0.00E+00
8GO:0018023: peptidyl-lysine trimethylation0.00E+00
9GO:0015727: lactate transport0.00E+00
10GO:0071474: cellular hyperosmotic response0.00E+00
11GO:1905421: regulation of plant organ morphogenesis0.00E+00
12GO:0002184: cytoplasmic translational termination0.00E+00
13GO:0030155: regulation of cell adhesion0.00E+00
14GO:0000025: maltose catabolic process0.00E+00
15GO:0015979: photosynthesis1.50E-10
16GO:0009773: photosynthetic electron transport in photosystem I3.96E-08
17GO:0005983: starch catabolic process3.29E-06
18GO:0030388: fructose 1,6-bisphosphate metabolic process8.17E-06
19GO:0009735: response to cytokinin8.69E-06
20GO:0032544: plastid translation2.73E-05
21GO:0006000: fructose metabolic process2.82E-05
22GO:0005982: starch metabolic process4.94E-05
23GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly6.13E-05
24GO:0010021: amylopectin biosynthetic process1.07E-04
25GO:0015976: carbon utilization1.07E-04
26GO:0006094: gluconeogenesis1.21E-04
27GO:0009409: response to cold1.30E-04
28GO:0009266: response to temperature stimulus1.45E-04
29GO:0015995: chlorophyll biosynthetic process2.01E-04
30GO:0009768: photosynthesis, light harvesting in photosystem I2.67E-04
31GO:0061077: chaperone-mediated protein folding3.04E-04
32GO:0010017: red or far-red light signaling pathway3.43E-04
33GO:0009645: response to low light intensity stimulus4.10E-04
34GO:0080093: regulation of photorespiration4.29E-04
35GO:0043007: maintenance of rDNA4.29E-04
36GO:0031998: regulation of fatty acid beta-oxidation4.29E-04
37GO:0010028: xanthophyll cycle4.29E-04
38GO:0000023: maltose metabolic process4.29E-04
39GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process4.29E-04
40GO:0006810: transport5.49E-04
41GO:0009644: response to high light intensity5.97E-04
42GO:0006002: fructose 6-phosphate metabolic process6.25E-04
43GO:0005976: polysaccharide metabolic process9.27E-04
44GO:0018026: peptidyl-lysine monomethylation9.27E-04
45GO:0031648: protein destabilization9.27E-04
46GO:0016122: xanthophyll metabolic process9.27E-04
47GO:0006521: regulation of cellular amino acid metabolic process9.27E-04
48GO:0051262: protein tetramerization9.27E-04
49GO:0006782: protoporphyrinogen IX biosynthetic process1.03E-03
50GO:0010582: floral meristem determinacy1.35E-03
51GO:0006518: peptide metabolic process1.51E-03
52GO:0010623: programmed cell death involved in cell development1.51E-03
53GO:0080055: low-affinity nitrate transport1.51E-03
54GO:0035436: triose phosphate transmembrane transport1.51E-03
55GO:0016050: vesicle organization1.51E-03
56GO:0048281: inflorescence morphogenesis1.51E-03
57GO:0005986: sucrose biosynthetic process1.54E-03
58GO:0009817: defense response to fungus, incompatible interaction1.69E-03
59GO:0018298: protein-chromophore linkage1.69E-03
60GO:0042742: defense response to bacterium1.75E-03
61GO:0010731: protein glutathionylation2.18E-03
62GO:1901332: negative regulation of lateral root development2.18E-03
63GO:0010148: transpiration2.18E-03
64GO:1902358: sulfate transmembrane transport2.18E-03
65GO:0010306: rhamnogalacturonan II biosynthetic process2.18E-03
66GO:0010600: regulation of auxin biosynthetic process2.93E-03
67GO:0006546: glycine catabolic process2.93E-03
68GO:0006552: leucine catabolic process2.93E-03
69GO:0010508: positive regulation of autophagy2.93E-03
70GO:0015713: phosphoglycerate transport2.93E-03
71GO:0010037: response to carbon dioxide2.93E-03
72GO:0006808: regulation of nitrogen utilization2.93E-03
73GO:0010023: proanthocyanidin biosynthetic process2.93E-03
74GO:0051322: anaphase2.93E-03
75GO:0019464: glycine decarboxylation via glycine cleavage system2.93E-03
76GO:0009765: photosynthesis, light harvesting2.93E-03
77GO:0006109: regulation of carbohydrate metabolic process2.93E-03
78GO:0015994: chlorophyll metabolic process2.93E-03
79GO:2000122: negative regulation of stomatal complex development2.93E-03
80GO:0045454: cell redox homeostasis3.08E-03
81GO:0007623: circadian rhythm3.28E-03
82GO:0006097: glyoxylate cycle3.76E-03
83GO:0035434: copper ion transmembrane transport3.76E-03
84GO:0006461: protein complex assembly3.76E-03
85GO:0003006: developmental process involved in reproduction4.65E-03
86GO:0009643: photosynthetic acclimation4.65E-03
87GO:0009635: response to herbicide4.65E-03
88GO:0042549: photosystem II stabilization4.65E-03
89GO:0000470: maturation of LSU-rRNA4.65E-03
90GO:0009913: epidermal cell differentiation4.65E-03
91GO:0019252: starch biosynthetic process5.52E-03
92GO:0010244: response to low fluence blue light stimulus by blue low-fluence system5.60E-03
93GO:0006458: 'de novo' protein folding5.60E-03
94GO:0042026: protein refolding5.60E-03
95GO:1901259: chloroplast rRNA processing5.60E-03
96GO:0030488: tRNA methylation5.60E-03
97GO:0009955: adaxial/abaxial pattern specification5.60E-03
98GO:0008272: sulfate transport6.62E-03
99GO:0009769: photosynthesis, light harvesting in photosystem II6.62E-03
100GO:0022904: respiratory electron transport chain6.62E-03
101GO:0010103: stomatal complex morphogenesis6.62E-03
102GO:0010161: red light signaling pathway6.62E-03
103GO:0070370: cellular heat acclimation6.62E-03
104GO:1901657: glycosyl compound metabolic process6.74E-03
105GO:0009704: de-etiolation7.71E-03
106GO:0006353: DNA-templated transcription, termination7.71E-03
107GO:0030091: protein repair7.71E-03
108GO:0010928: regulation of auxin mediated signaling pathway7.71E-03
109GO:0005978: glycogen biosynthetic process7.71E-03
110GO:0010027: thylakoid membrane organization8.57E-03
111GO:0009657: plastid organization8.84E-03
112GO:0001558: regulation of cell growth8.84E-03
113GO:0048507: meristem development1.00E-02
114GO:0006783: heme biosynthetic process1.00E-02
115GO:0051865: protein autoubiquitination1.00E-02
116GO:0006779: porphyrin-containing compound biosynthetic process1.13E-02
117GO:0042761: very long-chain fatty acid biosynthetic process1.13E-02
118GO:0000160: phosphorelay signal transduction system1.18E-02
119GO:0055114: oxidation-reduction process1.22E-02
120GO:0048829: root cap development1.26E-02
121GO:0031627: telomeric loop formation1.26E-02
122GO:0005975: carbohydrate metabolic process1.27E-02
123GO:0009631: cold acclimation1.30E-02
124GO:0010119: regulation of stomatal movement1.30E-02
125GO:0006869: lipid transport1.34E-02
126GO:0009073: aromatic amino acid family biosynthetic process1.40E-02
127GO:0043085: positive regulation of catalytic activity1.40E-02
128GO:0006415: translational termination1.40E-02
129GO:0009750: response to fructose1.40E-02
130GO:0010015: root morphogenesis1.40E-02
131GO:0034599: cellular response to oxidative stress1.49E-02
132GO:0006979: response to oxidative stress1.50E-02
133GO:0071365: cellular response to auxin stimulus1.54E-02
134GO:0010628: positive regulation of gene expression1.69E-02
135GO:0010102: lateral root morphogenesis1.69E-02
136GO:0006108: malate metabolic process1.69E-02
137GO:0006006: glucose metabolic process1.69E-02
138GO:0018107: peptidyl-threonine phosphorylation1.69E-02
139GO:0009718: anthocyanin-containing compound biosynthetic process1.69E-02
140GO:0009767: photosynthetic electron transport chain1.69E-02
141GO:0006412: translation1.72E-02
142GO:0019253: reductive pentose-phosphate cycle1.84E-02
143GO:0006302: double-strand break repair1.84E-02
144GO:0048467: gynoecium development1.84E-02
145GO:0005985: sucrose metabolic process1.99E-02
146GO:0010025: wax biosynthetic process2.15E-02
147GO:0006289: nucleotide-excision repair2.32E-02
148GO:0009944: polarity specification of adaxial/abaxial axis2.32E-02
149GO:0007017: microtubule-based process2.49E-02
150GO:0006825: copper ion transport2.49E-02
151GO:0051302: regulation of cell division2.49E-02
152GO:0019953: sexual reproduction2.49E-02
153GO:0042254: ribosome biogenesis2.61E-02
154GO:0019915: lipid storage2.66E-02
155GO:0051321: meiotic cell cycle2.66E-02
156GO:2000022: regulation of jasmonic acid mediated signaling pathway2.84E-02
157GO:0035428: hexose transmembrane transport2.84E-02
158GO:0019748: secondary metabolic process2.84E-02
159GO:0030245: cellulose catabolic process2.84E-02
160GO:0043086: negative regulation of catalytic activity2.94E-02
161GO:0009686: gibberellin biosynthetic process3.02E-02
162GO:0001944: vasculature development3.02E-02
163GO:0006284: base-excision repair3.20E-02
164GO:0010089: xylem development3.20E-02
165GO:0080167: response to karrikin3.33E-02
166GO:0042335: cuticle development3.58E-02
167GO:0018105: peptidyl-serine phosphorylation3.64E-02
168GO:0006662: glycerol ether metabolic process3.78E-02
169GO:0048868: pollen tube development3.78E-02
170GO:0046323: glucose import3.78E-02
171GO:0015986: ATP synthesis coupled proton transport3.98E-02
172GO:0006814: sodium ion transport3.98E-02
173GO:0009646: response to absence of light3.98E-02
174GO:0048825: cotyledon development4.18E-02
175GO:0071554: cell wall organization or biogenesis4.39E-02
176GO:0000302: response to reactive oxygen species4.39E-02
177GO:0048235: pollen sperm cell differentiation4.60E-02
178GO:0071281: cellular response to iron ion4.81E-02
RankGO TermAdjusted P value
1GO:0004645: phosphorylase activity0.00E+00
2GO:0080082: esculin beta-glucosidase activity0.00E+00
3GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
4GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
5GO:0004567: beta-mannosidase activity0.00E+00
6GO:0048039: ubiquinone binding0.00E+00
7GO:0009899: ent-kaurene synthase activity0.00E+00
8GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
9GO:0047668: amygdalin beta-glucosidase activity0.00E+00
10GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor0.00E+00
11GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
12GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
13GO:0015129: lactate transmembrane transporter activity0.00E+00
14GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
15GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
16GO:0008184: glycogen phosphorylase activity0.00E+00
17GO:0004174: electron-transferring-flavoprotein dehydrogenase activity0.00E+00
18GO:0004134: 4-alpha-glucanotransferase activity0.00E+00
19GO:0046422: violaxanthin de-epoxidase activity0.00E+00
20GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity8.17E-06
21GO:0019843: rRNA binding5.98E-05
22GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.07E-04
23GO:0031409: pigment binding2.00E-04
24GO:2001070: starch binding2.37E-04
25GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity4.29E-04
26GO:0019203: carbohydrate phosphatase activity4.29E-04
27GO:0004853: uroporphyrinogen decarboxylase activity4.29E-04
28GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity4.29E-04
29GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity4.29E-04
30GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.29E-04
31GO:0005227: calcium activated cation channel activity4.29E-04
32GO:0080079: cellobiose glucosidase activity4.29E-04
33GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity4.29E-04
34GO:0048038: quinone binding7.63E-04
35GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity9.27E-04
36GO:0008967: phosphoglycolate phosphatase activity9.27E-04
37GO:0016868: intramolecular transferase activity, phosphotransferases9.27E-04
38GO:0010297: heteropolysaccharide binding9.27E-04
39GO:0033201: alpha-1,4-glucan synthase activity9.27E-04
40GO:0018708: thiol S-methyltransferase activity9.27E-04
41GO:0003844: 1,4-alpha-glucan branching enzyme activity9.27E-04
42GO:0044183: protein binding involved in protein folding1.18E-03
43GO:0047372: acylglycerol lipase activity1.18E-03
44GO:0016168: chlorophyll binding1.30E-03
45GO:0009055: electron carrier activity1.37E-03
46GO:0015035: protein disulfide oxidoreductase activity1.49E-03
47GO:0045174: glutathione dehydrogenase (ascorbate) activity1.51E-03
48GO:0071917: triose-phosphate transmembrane transporter activity1.51E-03
49GO:0080054: low-affinity nitrate transmembrane transporter activity1.51E-03
50GO:0004324: ferredoxin-NADP+ reductase activity1.51E-03
51GO:0043169: cation binding1.51E-03
52GO:0004373: glycogen (starch) synthase activity1.51E-03
53GO:0017150: tRNA dihydrouridine synthase activity1.51E-03
54GO:0004565: beta-galactosidase activity1.54E-03
55GO:0004089: carbonate dehydratase activity1.54E-03
56GO:0016149: translation release factor activity, codon specific2.18E-03
57GO:0016851: magnesium chelatase activity2.18E-03
58GO:0043023: ribosomal large subunit binding2.18E-03
59GO:0004375: glycine dehydrogenase (decarboxylating) activity2.18E-03
60GO:0019201: nucleotide kinase activity2.18E-03
61GO:0004857: enzyme inhibitor activity2.40E-03
62GO:0005528: FK506 binding2.40E-03
63GO:0019199: transmembrane receptor protein kinase activity2.93E-03
64GO:0042277: peptide binding2.93E-03
65GO:0015120: phosphoglycerate transmembrane transporter activity2.93E-03
66GO:0016279: protein-lysine N-methyltransferase activity2.93E-03
67GO:0009011: starch synthase activity2.93E-03
68GO:0003735: structural constituent of ribosome3.43E-03
69GO:0030570: pectate lyase activity3.48E-03
70GO:0008725: DNA-3-methyladenine glycosylase activity3.76E-03
71GO:0003959: NADPH dehydrogenase activity3.76E-03
72GO:0004130: cytochrome-c peroxidase activity4.65E-03
73GO:0016615: malate dehydrogenase activity4.65E-03
74GO:0004332: fructose-bisphosphate aldolase activity4.65E-03
75GO:0004602: glutathione peroxidase activity5.60E-03
76GO:0030060: L-malate dehydrogenase activity5.60E-03
77GO:0005261: cation channel activity5.60E-03
78GO:0051920: peroxiredoxin activity5.60E-03
79GO:0033743: peptide-methionine (R)-S-oxide reductase activity5.60E-03
80GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity5.60E-03
81GO:0004017: adenylate kinase activity5.60E-03
82GO:0000156: phosphorelay response regulator activity6.74E-03
83GO:0004033: aldo-keto reductase (NADP) activity7.71E-03
84GO:0005337: nucleoside transmembrane transporter activity7.71E-03
85GO:0016209: antioxidant activity7.71E-03
86GO:0008289: lipid binding7.94E-03
87GO:0005375: copper ion transmembrane transporter activity8.84E-03
88GO:0008173: RNA methyltransferase activity8.84E-03
89GO:0008271: secondary active sulfate transmembrane transporter activity8.84E-03
90GO:0015078: hydrogen ion transmembrane transporter activity8.84E-03
91GO:0008138: protein tyrosine/serine/threonine phosphatase activity1.00E-02
92GO:0003747: translation release factor activity1.00E-02
93GO:0102483: scopolin beta-glucosidase activity1.01E-02
94GO:0016829: lyase activity1.07E-02
95GO:0030170: pyridoxal phosphate binding1.11E-02
96GO:0008047: enzyme activator activity1.26E-02
97GO:0003691: double-stranded telomeric DNA binding1.40E-02
98GO:0015116: sulfate transmembrane transporter activity1.54E-02
99GO:0008422: beta-glucosidase activity1.56E-02
100GO:0004022: alcohol dehydrogenase (NAD) activity1.69E-02
101GO:0005315: inorganic phosphate transmembrane transporter activity1.69E-02
102GO:0008266: poly(U) RNA binding1.84E-02
103GO:0004185: serine-type carboxypeptidase activity1.84E-02
104GO:0051537: 2 iron, 2 sulfur cluster binding1.99E-02
105GO:0043621: protein self-association1.99E-02
106GO:0015293: symporter activity2.07E-02
107GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.15E-02
108GO:0016491: oxidoreductase activity2.49E-02
109GO:0008408: 3'-5' exonuclease activity2.66E-02
110GO:0022891: substrate-specific transmembrane transporter activity3.02E-02
111GO:0008810: cellulase activity3.02E-02
112GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.04E-02
113GO:0008514: organic anion transmembrane transporter activity3.20E-02
114GO:0047134: protein-disulfide reductase activity3.39E-02
115GO:0052689: carboxylic ester hydrolase activity3.77E-02
116GO:0001085: RNA polymerase II transcription factor binding3.78E-02
117GO:0004791: thioredoxin-disulfide reductase activity3.98E-02
118GO:0005355: glucose transmembrane transporter activity3.98E-02
119GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.81E-02
RankGO TermAdjusted P value
1GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
2GO:0042579: microbody0.00E+00
3GO:0017133: mitochondrial electron transfer flavoprotein complex0.00E+00
4GO:0098572: stromal side of plastid thylakoid membrane0.00E+00
5GO:0009507: chloroplast5.99E-38
6GO:0009535: chloroplast thylakoid membrane7.40E-34
7GO:0009534: chloroplast thylakoid1.02E-30
8GO:0009570: chloroplast stroma5.43E-24
9GO:0009941: chloroplast envelope2.11E-21
10GO:0009579: thylakoid6.65E-19
11GO:0009543: chloroplast thylakoid lumen1.48E-09
12GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)8.84E-09
13GO:0030095: chloroplast photosystem II1.29E-07
14GO:0010287: plastoglobule3.62E-07
15GO:0031977: thylakoid lumen4.11E-06
16GO:0009501: amyloplast1.92E-05
17GO:0009508: plastid chromosome1.21E-04
18GO:0009295: nucleoid1.23E-04
19GO:0010319: stromule1.23E-04
20GO:0030076: light-harvesting complex1.71E-04
21GO:0009654: photosystem II oxygen evolving complex2.67E-04
22GO:0009344: nitrite reductase complex [NAD(P)H]4.29E-04
23GO:0009782: photosystem I antenna complex4.29E-04
24GO:0000791: euchromatin4.29E-04
25GO:0048046: apoplast4.50E-04
26GO:0009538: photosystem I reaction center5.13E-04
27GO:0009522: photosystem I6.40E-04
28GO:0009523: photosystem II6.99E-04
29GO:0019898: extrinsic component of membrane6.99E-04
30GO:0030093: chloroplast photosystem I9.27E-04
31GO:0030870: Mre11 complex9.27E-04
32GO:0043036: starch grain9.27E-04
33GO:0010007: magnesium chelatase complex1.51E-03
34GO:0005840: ribosome1.96E-03
35GO:0005960: glycine cleavage complex2.18E-03
36GO:0042651: thylakoid membrane2.65E-03
37GO:0015935: small ribosomal subunit2.91E-03
38GO:0030915: Smc5-Smc6 complex3.76E-03
39GO:0000795: synaptonemal complex3.76E-03
40GO:0016020: membrane4.29E-03
41GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)4.65E-03
42GO:0009533: chloroplast stromal thylakoid6.62E-03
43GO:0009706: chloroplast inner membrane7.29E-03
44GO:0031305: integral component of mitochondrial inner membrane7.71E-03
45GO:0000783: nuclear telomere cap complex8.84E-03
46GO:0042644: chloroplast nucleoid1.00E-02
47GO:0045298: tubulin complex1.00E-02
48GO:0005763: mitochondrial small ribosomal subunit1.00E-02
49GO:0005740: mitochondrial envelope1.26E-02
50GO:0009574: preprophase band1.69E-02
51GO:0005874: microtubule3.19E-02
52GO:0000785: chromatin4.60E-02
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Gene type



Gene DE type