GO Enrichment Analysis of Co-expressed Genes with
AT1G68830
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005997: xylulose metabolic process | 0.00E+00 |
| 2 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 3 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 4 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 5 | GO:0098586: cellular response to virus | 0.00E+00 |
| 6 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 7 | GO:0046677: response to antibiotic | 0.00E+00 |
| 8 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 9 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 10 | GO:0010136: ureide catabolic process | 5.82E-09 |
| 11 | GO:0006145: purine nucleobase catabolic process | 2.84E-08 |
| 12 | GO:0015995: chlorophyll biosynthetic process | 4.22E-07 |
| 13 | GO:0042853: L-alanine catabolic process | 1.25E-06 |
| 14 | GO:0000256: allantoin catabolic process | 1.25E-06 |
| 15 | GO:0010207: photosystem II assembly | 1.61E-05 |
| 16 | GO:0018298: protein-chromophore linkage | 1.69E-05 |
| 17 | GO:0015979: photosynthesis | 2.59E-05 |
| 18 | GO:0009853: photorespiration | 2.75E-05 |
| 19 | GO:0055114: oxidation-reduction process | 3.66E-05 |
| 20 | GO:0010114: response to red light | 4.53E-05 |
| 21 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 4.89E-05 |
| 22 | GO:0009644: response to high light intensity | 5.26E-05 |
| 23 | GO:0010189: vitamin E biosynthetic process | 6.84E-05 |
| 24 | GO:0009642: response to light intensity | 1.18E-04 |
| 25 | GO:0010028: xanthophyll cycle | 1.60E-04 |
| 26 | GO:0010362: negative regulation of anion channel activity by blue light | 1.60E-04 |
| 27 | GO:0071277: cellular response to calcium ion | 1.60E-04 |
| 28 | GO:0031426: polycistronic mRNA processing | 1.60E-04 |
| 29 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 3.65E-04 |
| 30 | GO:0042550: photosystem I stabilization | 3.65E-04 |
| 31 | GO:0016122: xanthophyll metabolic process | 3.65E-04 |
| 32 | GO:0046741: transport of virus in host, tissue to tissue | 3.65E-04 |
| 33 | GO:0009915: phloem sucrose loading | 3.65E-04 |
| 34 | GO:0080005: photosystem stoichiometry adjustment | 3.65E-04 |
| 35 | GO:0006435: threonyl-tRNA aminoacylation | 3.65E-04 |
| 36 | GO:0048314: embryo sac morphogenesis | 3.65E-04 |
| 37 | GO:0030187: melatonin biosynthetic process | 3.65E-04 |
| 38 | GO:0007623: circadian rhythm | 3.72E-04 |
| 39 | GO:0009637: response to blue light | 3.82E-04 |
| 40 | GO:0005977: glycogen metabolic process | 5.97E-04 |
| 41 | GO:0009405: pathogenesis | 5.97E-04 |
| 42 | GO:0006433: prolyl-tRNA aminoacylation | 5.97E-04 |
| 43 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.66E-04 |
| 44 | GO:0009658: chloroplast organization | 7.28E-04 |
| 45 | GO:0043572: plastid fission | 8.53E-04 |
| 46 | GO:2001141: regulation of RNA biosynthetic process | 8.53E-04 |
| 47 | GO:0071484: cellular response to light intensity | 8.53E-04 |
| 48 | GO:0010239: chloroplast mRNA processing | 8.53E-04 |
| 49 | GO:0046739: transport of virus in multicellular host | 8.53E-04 |
| 50 | GO:0009902: chloroplast relocation | 1.13E-03 |
| 51 | GO:0010021: amylopectin biosynthetic process | 1.13E-03 |
| 52 | GO:0010109: regulation of photosynthesis | 1.13E-03 |
| 53 | GO:0006545: glycine biosynthetic process | 1.13E-03 |
| 54 | GO:0015994: chlorophyll metabolic process | 1.13E-03 |
| 55 | GO:0006021: inositol biosynthetic process | 1.13E-03 |
| 56 | GO:0071483: cellular response to blue light | 1.13E-03 |
| 57 | GO:0016123: xanthophyll biosynthetic process | 1.43E-03 |
| 58 | GO:0010117: photoprotection | 1.43E-03 |
| 59 | GO:0046855: inositol phosphate dephosphorylation | 1.76E-03 |
| 60 | GO:0009648: photoperiodism | 2.11E-03 |
| 61 | GO:0071470: cellular response to osmotic stress | 2.11E-03 |
| 62 | GO:0048528: post-embryonic root development | 2.48E-03 |
| 63 | GO:0009645: response to low light intensity stimulus | 2.48E-03 |
| 64 | GO:0019375: galactolipid biosynthetic process | 2.88E-03 |
| 65 | GO:0009704: de-etiolation | 2.88E-03 |
| 66 | GO:0010218: response to far red light | 2.96E-03 |
| 67 | GO:0007568: aging | 3.10E-03 |
| 68 | GO:0009657: plastid organization | 3.29E-03 |
| 69 | GO:0034599: cellular response to oxidative stress | 3.55E-03 |
| 70 | GO:0006754: ATP biosynthetic process | 3.72E-03 |
| 71 | GO:0098656: anion transmembrane transport | 3.72E-03 |
| 72 | GO:0009821: alkaloid biosynthetic process | 3.72E-03 |
| 73 | GO:0048507: meristem development | 3.72E-03 |
| 74 | GO:0010206: photosystem II repair | 3.72E-03 |
| 75 | GO:0090333: regulation of stomatal closure | 3.72E-03 |
| 76 | GO:0006783: heme biosynthetic process | 3.72E-03 |
| 77 | GO:0009735: response to cytokinin | 3.77E-03 |
| 78 | GO:0009638: phototropism | 4.17E-03 |
| 79 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.17E-03 |
| 80 | GO:0009416: response to light stimulus | 4.32E-03 |
| 81 | GO:0009688: abscisic acid biosynthetic process | 4.64E-03 |
| 82 | GO:0009641: shade avoidance | 4.64E-03 |
| 83 | GO:0006259: DNA metabolic process | 4.64E-03 |
| 84 | GO:0009970: cellular response to sulfate starvation | 4.64E-03 |
| 85 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.64E-03 |
| 86 | GO:0006995: cellular response to nitrogen starvation | 4.64E-03 |
| 87 | GO:0016485: protein processing | 5.12E-03 |
| 88 | GO:0009773: photosynthetic electron transport in photosystem I | 5.12E-03 |
| 89 | GO:0006265: DNA topological change | 5.12E-03 |
| 90 | GO:0043085: positive regulation of catalytic activity | 5.12E-03 |
| 91 | GO:0006352: DNA-templated transcription, initiation | 5.12E-03 |
| 92 | GO:0031347: regulation of defense response | 5.28E-03 |
| 93 | GO:0006790: sulfur compound metabolic process | 5.62E-03 |
| 94 | GO:0009767: photosynthetic electron transport chain | 6.14E-03 |
| 95 | GO:0005986: sucrose biosynthetic process | 6.14E-03 |
| 96 | GO:0010223: secondary shoot formation | 6.67E-03 |
| 97 | GO:0009266: response to temperature stimulus | 6.67E-03 |
| 98 | GO:0010020: chloroplast fission | 6.67E-03 |
| 99 | GO:0045454: cell redox homeostasis | 6.79E-03 |
| 100 | GO:0046854: phosphatidylinositol phosphorylation | 7.22E-03 |
| 101 | GO:0019853: L-ascorbic acid biosynthetic process | 7.22E-03 |
| 102 | GO:0006833: water transport | 7.79E-03 |
| 103 | GO:0009553: embryo sac development | 8.12E-03 |
| 104 | GO:0009408: response to heat | 8.87E-03 |
| 105 | GO:0006825: copper ion transport | 8.97E-03 |
| 106 | GO:0051302: regulation of cell division | 8.97E-03 |
| 107 | GO:0008299: isoprenoid biosynthetic process | 8.97E-03 |
| 108 | GO:0006418: tRNA aminoacylation for protein translation | 8.97E-03 |
| 109 | GO:0031408: oxylipin biosynthetic process | 9.59E-03 |
| 110 | GO:0051321: meiotic cell cycle | 9.59E-03 |
| 111 | GO:0019748: secondary metabolic process | 1.02E-02 |
| 112 | GO:0009058: biosynthetic process | 1.11E-02 |
| 113 | GO:0034220: ion transmembrane transport | 1.29E-02 |
| 114 | GO:0010118: stomatal movement | 1.29E-02 |
| 115 | GO:0006606: protein import into nucleus | 1.29E-02 |
| 116 | GO:0006413: translational initiation | 1.35E-02 |
| 117 | GO:0010182: sugar mediated signaling pathway | 1.36E-02 |
| 118 | GO:0006662: glycerol ether metabolic process | 1.36E-02 |
| 119 | GO:0007059: chromosome segregation | 1.43E-02 |
| 120 | GO:0009793: embryo development ending in seed dormancy | 1.44E-02 |
| 121 | GO:0019252: starch biosynthetic process | 1.50E-02 |
| 122 | GO:0009791: post-embryonic development | 1.50E-02 |
| 123 | GO:0000302: response to reactive oxygen species | 1.58E-02 |
| 124 | GO:0016032: viral process | 1.65E-02 |
| 125 | GO:0010468: regulation of gene expression | 1.73E-02 |
| 126 | GO:0030163: protein catabolic process | 1.73E-02 |
| 127 | GO:0035556: intracellular signal transduction | 1.97E-02 |
| 128 | GO:0009409: response to cold | 1.98E-02 |
| 129 | GO:0001666: response to hypoxia | 2.05E-02 |
| 130 | GO:0008219: cell death | 2.47E-02 |
| 131 | GO:0048481: plant ovule development | 2.47E-02 |
| 132 | GO:0055085: transmembrane transport | 2.48E-02 |
| 133 | GO:0006457: protein folding | 2.54E-02 |
| 134 | GO:0000160: phosphorelay signal transduction system | 2.56E-02 |
| 135 | GO:0006811: ion transport | 2.65E-02 |
| 136 | GO:0000724: double-strand break repair via homologous recombination | 2.84E-02 |
| 137 | GO:0009867: jasmonic acid mediated signaling pathway | 2.93E-02 |
| 138 | GO:0046777: protein autophosphorylation | 2.98E-02 |
| 139 | GO:0006631: fatty acid metabolic process | 3.31E-02 |
| 140 | GO:0042542: response to hydrogen peroxide | 3.41E-02 |
| 141 | GO:0009809: lignin biosynthetic process | 4.34E-02 |
| 142 | GO:0006364: rRNA processing | 4.34E-02 |
| 143 | GO:0006979: response to oxidative stress | 4.46E-02 |
| 144 | GO:0006417: regulation of translation | 4.66E-02 |
| 145 | GO:0048316: seed development | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 2 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 3 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 4 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 5 | GO:0047652: allantoate deiminase activity | 0.00E+00 |
| 6 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 7 | GO:0047958: glycine:2-oxoglutarate aminotransferase activity | 0.00E+00 |
| 8 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 9 | GO:0009976: tocopherol cyclase activity | 0.00E+00 |
| 10 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 11 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 12 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 13 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 14 | GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | 0.00E+00 |
| 15 | GO:0003858: 3-hydroxybutyrate dehydrogenase activity | 0.00E+00 |
| 16 | GO:0008453: alanine-glyoxylate transaminase activity | 8.34E-08 |
| 17 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 1.08E-05 |
| 18 | GO:0016853: isomerase activity | 9.29E-05 |
| 19 | GO:0046481: digalactosyldiacylglycerol synthase activity | 1.60E-04 |
| 20 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.60E-04 |
| 21 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 1.60E-04 |
| 22 | GO:0035671: enone reductase activity | 1.60E-04 |
| 23 | GO:0046480: galactolipid galactosyltransferase activity | 1.60E-04 |
| 24 | GO:0004008: copper-exporting ATPase activity | 1.60E-04 |
| 25 | GO:0004856: xylulokinase activity | 1.60E-04 |
| 26 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 1.60E-04 |
| 27 | GO:0016168: chlorophyll binding | 2.10E-04 |
| 28 | GO:0008883: glutamyl-tRNA reductase activity | 3.65E-04 |
| 29 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.65E-04 |
| 30 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.65E-04 |
| 31 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.65E-04 |
| 32 | GO:0004829: threonine-tRNA ligase activity | 3.65E-04 |
| 33 | GO:0019156: isoamylase activity | 3.65E-04 |
| 34 | GO:0031409: pigment binding | 5.47E-04 |
| 35 | GO:0030267: glyoxylate reductase (NADP) activity | 5.97E-04 |
| 36 | GO:0004096: catalase activity | 5.97E-04 |
| 37 | GO:0070402: NADPH binding | 5.97E-04 |
| 38 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 5.97E-04 |
| 39 | GO:0004827: proline-tRNA ligase activity | 5.97E-04 |
| 40 | GO:0003913: DNA photolyase activity | 5.97E-04 |
| 41 | GO:0004848: ureidoglycolate hydrolase activity | 5.97E-04 |
| 42 | GO:0008253: 5'-nucleotidase activity | 5.97E-04 |
| 43 | GO:0004148: dihydrolipoyl dehydrogenase activity | 5.97E-04 |
| 44 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 5.97E-04 |
| 45 | GO:0050307: sucrose-phosphate phosphatase activity | 5.97E-04 |
| 46 | GO:0009882: blue light photoreceptor activity | 8.53E-04 |
| 47 | GO:0048027: mRNA 5'-UTR binding | 8.53E-04 |
| 48 | GO:0035250: UDP-galactosyltransferase activity | 8.53E-04 |
| 49 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 8.53E-04 |
| 50 | GO:0016851: magnesium chelatase activity | 8.53E-04 |
| 51 | GO:0004792: thiosulfate sulfurtransferase activity | 8.53E-04 |
| 52 | GO:0001053: plastid sigma factor activity | 1.13E-03 |
| 53 | GO:0016987: sigma factor activity | 1.13E-03 |
| 54 | GO:0008080: N-acetyltransferase activity | 1.17E-03 |
| 55 | GO:0046872: metal ion binding | 1.41E-03 |
| 56 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.43E-03 |
| 57 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.43E-03 |
| 58 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 1.43E-03 |
| 59 | GO:0000293: ferric-chelate reductase activity | 1.76E-03 |
| 60 | GO:0004556: alpha-amylase activity | 1.76E-03 |
| 61 | GO:0008237: metallopeptidase activity | 1.84E-03 |
| 62 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.11E-03 |
| 63 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.11E-03 |
| 64 | GO:0030145: manganese ion binding | 3.10E-03 |
| 65 | GO:0050897: cobalt ion binding | 3.10E-03 |
| 66 | GO:0005375: copper ion transmembrane transporter activity | 3.29E-03 |
| 67 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 3.29E-03 |
| 68 | GO:0016887: ATPase activity | 3.51E-03 |
| 69 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 3.72E-03 |
| 70 | GO:0071949: FAD binding | 3.72E-03 |
| 71 | GO:0016844: strictosidine synthase activity | 4.17E-03 |
| 72 | GO:0045309: protein phosphorylated amino acid binding | 4.17E-03 |
| 73 | GO:0008047: enzyme activator activity | 4.64E-03 |
| 74 | GO:0019904: protein domain specific binding | 5.12E-03 |
| 75 | GO:0005315: inorganic phosphate transmembrane transporter activity | 6.14E-03 |
| 76 | GO:0031072: heat shock protein binding | 6.14E-03 |
| 77 | GO:0000155: phosphorelay sensor kinase activity | 6.14E-03 |
| 78 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 6.14E-03 |
| 79 | GO:0022891: substrate-specific transmembrane transporter activity | 1.09E-02 |
| 80 | GO:0003727: single-stranded RNA binding | 1.15E-02 |
| 81 | GO:0008514: organic anion transmembrane transporter activity | 1.15E-02 |
| 82 | GO:0030170: pyridoxal phosphate binding | 1.17E-02 |
| 83 | GO:0047134: protein-disulfide reductase activity | 1.22E-02 |
| 84 | GO:0004812: aminoacyl-tRNA ligase activity | 1.22E-02 |
| 85 | GO:0004791: thioredoxin-disulfide reductase activity | 1.43E-02 |
| 86 | GO:0010181: FMN binding | 1.43E-02 |
| 87 | GO:0048038: quinone binding | 1.58E-02 |
| 88 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.73E-02 |
| 89 | GO:0016791: phosphatase activity | 1.81E-02 |
| 90 | GO:0015250: water channel activity | 2.05E-02 |
| 91 | GO:0004721: phosphoprotein phosphatase activity | 2.30E-02 |
| 92 | GO:0008236: serine-type peptidase activity | 2.39E-02 |
| 93 | GO:0050661: NADP binding | 3.21E-02 |
| 94 | GO:0004185: serine-type carboxypeptidase activity | 3.51E-02 |
| 95 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.71E-02 |
| 96 | GO:0043621: protein self-association | 3.71E-02 |
| 97 | GO:0051287: NAD binding | 4.02E-02 |
| 98 | GO:0005506: iron ion binding | 4.33E-02 |
| 99 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.34E-02 |
| 100 | GO:0009055: electron carrier activity | 4.40E-02 |
| 101 | GO:0016298: lipase activity | 4.44E-02 |
| 102 | GO:0031625: ubiquitin protein ligase binding | 4.66E-02 |
| 103 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.37E-36 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 4.09E-17 |
| 3 | GO:0009941: chloroplast envelope | 5.89E-12 |
| 4 | GO:0009534: chloroplast thylakoid | 1.09E-11 |
| 5 | GO:0009570: chloroplast stroma | 9.33E-11 |
| 6 | GO:0010287: plastoglobule | 1.69E-05 |
| 7 | GO:0009706: chloroplast inner membrane | 1.50E-04 |
| 8 | GO:0009782: photosystem I antenna complex | 1.60E-04 |
| 9 | GO:0017101: aminoacyl-tRNA synthetase multienzyme complex | 1.60E-04 |
| 10 | GO:0009579: thylakoid | 2.97E-04 |
| 11 | GO:0031977: thylakoid lumen | 4.77E-04 |
| 12 | GO:0010007: magnesium chelatase complex | 5.97E-04 |
| 13 | GO:0031969: chloroplast membrane | 1.00E-03 |
| 14 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 1.13E-03 |
| 15 | GO:0005777: peroxisome | 1.24E-03 |
| 16 | GO:0009523: photosystem II | 1.35E-03 |
| 17 | GO:0009543: chloroplast thylakoid lumen | 1.57E-03 |
| 18 | GO:0010319: stromule | 1.84E-03 |
| 19 | GO:0009707: chloroplast outer membrane | 2.69E-03 |
| 20 | GO:0009514: glyoxysome | 3.29E-03 |
| 21 | GO:0042644: chloroplast nucleoid | 3.72E-03 |
| 22 | GO:0005747: mitochondrial respiratory chain complex I | 7.18E-03 |
| 23 | GO:0030076: light-harvesting complex | 7.22E-03 |
| 24 | GO:0005739: mitochondrion | 7.72E-03 |
| 25 | GO:0043234: protein complex | 7.79E-03 |
| 26 | GO:0045271: respiratory chain complex I | 8.97E-03 |
| 27 | GO:0009654: photosystem II oxygen evolving complex | 8.97E-03 |
| 28 | GO:0042651: thylakoid membrane | 8.97E-03 |
| 29 | GO:0009532: plastid stroma | 9.59E-03 |
| 30 | GO:0009522: photosystem I | 1.43E-02 |
| 31 | GO:0019898: extrinsic component of membrane | 1.50E-02 |
| 32 | GO:0005778: peroxisomal membrane | 1.89E-02 |
| 33 | GO:0009295: nucleoid | 1.89E-02 |
| 34 | GO:0031966: mitochondrial membrane | 4.12E-02 |