co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G67430

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
2	GO:0090239: regulation of histone H4 acetylation	0.00E+00
3	GO:0044843: cell cycle G1/S phase transition	0.00E+00
4	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
5	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
6	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
7	GO:0000494: box C/D snoRNA 3'-end processing	0.00E+00
8	GO:0034050: host programmed cell death induced by symbiont	0.00E+00
9	GO:0046487: glyoxylate metabolic process	0.00E+00
10	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
11	GO:1990258: histone glutamine methylation	0.00E+00
12	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
13	GO:0006412: translation	1.46E-147
14	GO:0042254: ribosome biogenesis	2.31E-53
15	GO:0000027: ribosomal large subunit assembly	2.08E-13
16	GO:0006626: protein targeting to mitochondrion	1.26E-10
17	GO:0006413: translational initiation	1.00E-06
18	GO:0000028: ribosomal small subunit assembly	1.03E-06
19	GO:0000387: spliceosomal snRNP assembly	4.05E-06
20	GO:0006364: rRNA processing	5.83E-06
21	GO:0045905: positive regulation of translational termination	1.70E-05
22	GO:0045901: positive regulation of translational elongation	1.70E-05
23	GO:0006452: translational frameshifting	1.70E-05
24	GO:0009955: adaxial/abaxial pattern specification	2.13E-05
25	GO:0000398: mRNA splicing, via spliceosome	2.85E-05
26	GO:0030150: protein import into mitochondrial matrix	3.88E-05
27	GO:0002181: cytoplasmic translation	5.62E-05
28	GO:1902626: assembly of large subunit precursor of preribosome	5.62E-05
29	GO:0009735: response to cytokinin	8.25E-05
30	GO:0042274: ribosomal small subunit biogenesis	2.01E-04
31	GO:0031167: rRNA methylation	3.03E-04
32	GO:0045040: protein import into mitochondrial outer membrane	4.24E-04
33	GO:0000245: spliceosomal complex assembly	5.63E-04
34	GO:0009554: megasporogenesis	5.63E-04
35	GO:0015801: aromatic amino acid transport	6.28E-04
36	GO:0030490: maturation of SSU-rRNA	6.28E-04
37	GO:0006434: seryl-tRNA aminoacylation	6.28E-04
38	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	6.28E-04
39	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	6.28E-04
40	GO:0032365: intracellular lipid transport	6.28E-04
41	GO:0006407: rRNA export from nucleus	6.28E-04
42	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	6.28E-04
43	GO:0008033: tRNA processing	1.09E-03
44	GO:0001510: RNA methylation	1.09E-03
45	GO:0006414: translational elongation	1.19E-03
46	GO:0045859: regulation of protein kinase activity	1.35E-03
47	GO:0009156: ribonucleoside monophosphate biosynthetic process	1.35E-03
48	GO:0031204: posttranslational protein targeting to membrane, translocation	1.35E-03
49	GO:2000072: regulation of defense response to fungus, incompatible interaction	1.35E-03
50	GO:0048569: post-embryonic animal organ development	1.35E-03
51	GO:0043981: histone H4-K5 acetylation	1.35E-03
52	GO:0009967: positive regulation of signal transduction	1.35E-03
53	GO:0015786: UDP-glucose transport	1.35E-03
54	GO:0051788: response to misfolded protein	1.35E-03
55	GO:0009793: embryo development ending in seed dormancy	1.73E-03
56	GO:0010162: seed dormancy process	1.80E-03
57	GO:0015031: protein transport	1.88E-03
58	GO:0009150: purine ribonucleotide metabolic process	2.23E-03
59	GO:0015783: GDP-fucose transport	2.23E-03
60	GO:0042256: mature ribosome assembly	2.23E-03
61	GO:0045039: protein import into mitochondrial inner membrane	2.23E-03
62	GO:0032940: secretion by cell	2.23E-03
63	GO:0006820: anion transport	2.39E-03
64	GO:0006446: regulation of translational initiation	3.07E-03
65	GO:0048467: gynoecium development	3.07E-03
66	GO:0009855: determination of bilateral symmetry	3.23E-03
67	GO:0006168: adenine salvage	3.23E-03
68	GO:0001676: long-chain fatty acid metabolic process	3.23E-03
69	GO:0046513: ceramide biosynthetic process	3.23E-03
70	GO:0033617: mitochondrial respiratory chain complex IV assembly	3.23E-03
71	GO:0006166: purine ribonucleoside salvage	3.23E-03
72	GO:0070301: cellular response to hydrogen peroxide	3.23E-03
73	GO:0006241: CTP biosynthetic process	3.23E-03
74	GO:0072334: UDP-galactose transmembrane transport	3.23E-03
75	GO:0009647: skotomorphogenesis	3.23E-03
76	GO:0006165: nucleoside diphosphate phosphorylation	3.23E-03
77	GO:0032981: mitochondrial respiratory chain complex I assembly	3.23E-03
78	GO:0006228: UTP biosynthetic process	3.23E-03
79	GO:0006164: purine nucleotide biosynthetic process	3.23E-03
80	GO:0010043: response to zinc ion	4.26E-03
81	GO:0009116: nucleoside metabolic process	4.27E-03
82	GO:0009165: nucleotide biosynthetic process	4.36E-03
83	GO:0006183: GTP biosynthetic process	4.36E-03
84	GO:0010363: regulation of plant-type hypersensitive response	4.36E-03
85	GO:0042273: ribosomal large subunit biogenesis	4.36E-03
86	GO:0051205: protein insertion into membrane	4.36E-03
87	GO:0061077: chaperone-mediated protein folding	5.19E-03
88	GO:0009651: response to salt stress	5.43E-03
89	GO:0097428: protein maturation by iron-sulfur cluster transfer	5.60E-03
90	GO:0006461: protein complex assembly	5.60E-03
91	GO:0007029: endoplasmic reticulum organization	5.60E-03
92	GO:1902183: regulation of shoot apical meristem development	5.60E-03
93	GO:0044209: AMP salvage	5.60E-03
94	GO:0045116: protein neddylation	5.60E-03
95	GO:0019408: dolichol biosynthetic process	5.60E-03
96	GO:0007005: mitochondrion organization	5.69E-03
97	GO:0040007: growth	6.21E-03
98	GO:0008283: cell proliferation	6.64E-03
99	GO:0001731: formation of translation preinitiation complex	6.95E-03
100	GO:0016070: RNA metabolic process	6.95E-03
101	GO:0000470: maturation of LSU-rRNA	6.95E-03
102	GO:0043248: proteasome assembly	6.95E-03
103	GO:0000413: protein peptidyl-prolyl isomerization	7.93E-03
104	GO:0046686: response to cadmium ion	8.13E-03
105	GO:1901001: negative regulation of response to salt stress	8.41E-03
106	GO:0006458: 'de novo' protein folding	8.41E-03
107	GO:0000054: ribosomal subunit export from nucleus	8.41E-03
108	GO:0048528: post-embryonic root development	9.96E-03
109	GO:0080186: developmental vegetative growth	9.96E-03
110	GO:0009645: response to low light intensity stimulus	9.96E-03
111	GO:0051603: proteolysis involved in cellular protein catabolic process	1.02E-02
112	GO:0006635: fatty acid beta-oxidation	1.06E-02
113	GO:0031540: regulation of anthocyanin biosynthetic process	1.16E-02
114	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.16E-02
115	GO:0009690: cytokinin metabolic process	1.16E-02
116	GO:0006605: protein targeting	1.16E-02
117	GO:0010204: defense response signaling pathway, resistance gene-independent	1.34E-02
118	GO:0030968: endoplasmic reticulum unfolded protein response	1.34E-02
119	GO:0043562: cellular response to nitrogen levels	1.34E-02
120	GO:0001558: regulation of cell growth	1.34E-02
121	GO:0006189: 'de novo' IMP biosynthetic process	1.52E-02
122	GO:0015780: nucleotide-sugar transport	1.52E-02
123	GO:0098656: anion transmembrane transport	1.52E-02
124	GO:0009245: lipid A biosynthetic process	1.52E-02
125	GO:0048507: meristem development	1.52E-02
126	GO:0042761: very long-chain fatty acid biosynthetic process	1.71E-02
127	GO:0010449: root meristem growth	1.71E-02
128	GO:0030422: production of siRNA involved in RNA interference	1.91E-02
129	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.91E-02
130	GO:0006511: ubiquitin-dependent protein catabolic process	2.10E-02
131	GO:0006352: DNA-templated transcription, initiation	2.12E-02
132	GO:0048229: gametophyte development	2.12E-02
133	GO:0010015: root morphogenesis	2.12E-02
134	GO:0006913: nucleocytoplasmic transport	2.12E-02
135	GO:0015770: sucrose transport	2.12E-02
136	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	2.33E-02
137	GO:0071365: cellular response to auxin stimulus	2.33E-02
138	GO:0006790: sulfur compound metabolic process	2.33E-02
139	GO:0012501: programmed cell death	2.33E-02
140	GO:2000028: regulation of photoperiodism, flowering	2.56E-02
141	GO:0010102: lateral root morphogenesis	2.56E-02
142	GO:0090351: seedling development	3.02E-02
143	GO:0010167: response to nitrate	3.02E-02
144	GO:0009409: response to cold	3.35E-02
145	GO:0006289: nucleotide-excision repair	3.52E-02
146	GO:0006487: protein N-linked glycosylation	3.52E-02
147	GO:0009944: polarity specification of adaxial/abaxial axis	3.52E-02
148	GO:0009644: response to high light intensity	3.57E-02
149	GO:0009965: leaf morphogenesis	3.71E-02
150	GO:0051302: regulation of cell division	3.77E-02
151	GO:0003333: amino acid transmembrane transport	4.03E-02
152	GO:0015992: proton transport	4.03E-02
153	GO:0051260: protein homooligomerization	4.03E-02
154	GO:0010431: seed maturation	4.03E-02
155	GO:0071215: cellular response to abscisic acid stimulus	4.57E-02
156	GO:0009294: DNA mediated transformation	4.57E-02
157	GO:0010584: pollen exine formation	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:1990259: histone-glutamine methyltransferase activity	0.00E+00
2	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
3	GO:0016881: acid-amino acid ligase activity	0.00E+00
4	GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity	0.00E+00
5	GO:0003735: structural constituent of ribosome	9.08E-184
6	GO:0003729: mRNA binding	6.51E-36
7	GO:0019843: rRNA binding	2.23E-13
8	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.61E-08
9	GO:0003743: translation initiation factor activity	2.46E-07
10	GO:0003746: translation elongation factor activity	8.55E-07
11	GO:0004298: threonine-type endopeptidase activity	2.72E-06
12	GO:0003723: RNA binding	3.58E-06
13	GO:0043022: ribosome binding	4.83E-05
14	GO:0008649: rRNA methyltransferase activity	5.62E-05
15	GO:0001055: RNA polymerase II activity	1.17E-04
16	GO:0008097: 5S rRNA binding	1.18E-04
17	GO:0001054: RNA polymerase I activity	1.85E-04
18	GO:0001056: RNA polymerase III activity	2.25E-04
19	GO:0008233: peptidase activity	4.54E-04
20	GO:0005080: protein kinase C binding	6.28E-04
21	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	6.28E-04
22	GO:0035614: snRNA stem-loop binding	6.28E-04
23	GO:0000824: inositol tetrakisphosphate 3-kinase activity	6.28E-04
24	GO:0004828: serine-tRNA ligase activity	6.28E-04
25	GO:0004679: AMP-activated protein kinase activity	6.28E-04
26	GO:0047326: inositol tetrakisphosphate 5-kinase activity	6.28E-04
27	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	6.28E-04
28	GO:0030515: snoRNA binding	7.20E-04
29	GO:0015288: porin activity	8.95E-04
30	GO:0008308: voltage-gated anion channel activity	1.09E-03
31	GO:0000166: nucleotide binding	1.30E-03
32	GO:0030619: U1 snRNA binding	1.35E-03
33	GO:0050291: sphingosine N-acyltransferase activity	1.35E-03
34	GO:0019781: NEDD8 activating enzyme activity	1.35E-03
35	GO:0015173: aromatic amino acid transmembrane transporter activity	1.35E-03
36	GO:0004750: ribulose-phosphate 3-epimerase activity	1.35E-03
37	GO:0032934: sterol binding	1.35E-03
38	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	1.35E-03
39	GO:0005078: MAP-kinase scaffold activity	1.35E-03
40	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.00E-03
41	GO:0044183: protein binding involved in protein folding	2.08E-03
42	GO:0005457: GDP-fucose transmembrane transporter activity	2.23E-03
43	GO:0015462: ATPase-coupled protein transmembrane transporter activity	2.23E-03
44	GO:0008253: 5'-nucleotidase activity	2.23E-03
45	GO:0015266: protein channel activity	2.72E-03
46	GO:0004550: nucleoside diphosphate kinase activity	3.23E-03
47	GO:0047627: adenylylsulfatase activity	3.23E-03
48	GO:0004749: ribose phosphate diphosphokinase activity	3.23E-03
49	GO:0003999: adenine phosphoribosyltransferase activity	3.23E-03
50	GO:0005460: UDP-glucose transmembrane transporter activity	3.23E-03
51	GO:0004407: histone deacetylase activity	4.27E-03
52	GO:0016004: phospholipase activator activity	4.36E-03
53	GO:0005086: ARF guanyl-nucleotide exchange factor activity	4.36E-03
54	GO:0070628: proteasome binding	4.36E-03
55	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	4.36E-03
56	GO:0005459: UDP-galactose transmembrane transporter activity	5.60E-03
57	GO:0008641: small protein activating enzyme activity	5.60E-03
58	GO:0045547: dehydrodolichyl diphosphate synthase activity	5.60E-03
59	GO:0005275: amine transmembrane transporter activity	5.60E-03
60	GO:0004040: amidase activity	5.60E-03
61	GO:0031593: polyubiquitin binding	6.95E-03
62	GO:0031177: phosphopantetheine binding	6.95E-03
63	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	6.95E-03
64	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.10E-03
65	GO:0019887: protein kinase regulator activity	8.41E-03
66	GO:0004656: procollagen-proline 4-dioxygenase activity	8.41E-03
67	GO:0102391: decanoate--CoA ligase activity	8.41E-03
68	GO:0000035: acyl binding	8.41E-03
69	GO:0004467: long-chain fatty acid-CoA ligase activity	9.96E-03
70	GO:0005338: nucleotide-sugar transmembrane transporter activity	9.96E-03
71	GO:0008235: metalloexopeptidase activity	9.96E-03
72	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.16E-02
73	GO:0008135: translation factor activity, RNA binding	1.34E-02
74	GO:0045309: protein phosphorylated amino acid binding	1.71E-02
75	GO:0008515: sucrose transmembrane transporter activity	2.12E-02
76	GO:0019904: protein domain specific binding	2.12E-02
77	GO:0051119: sugar transmembrane transporter activity	3.02E-02
78	GO:0005515: protein binding	3.26E-02
79	GO:0031418: L-ascorbic acid binding	3.52E-02
80	GO:0043130: ubiquitin binding	3.52E-02
81	GO:0005528: FK506 binding	3.52E-02
82	GO:0051087: chaperone binding	3.77E-02
83	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	4.03E-02
84	GO:0008514: organic anion transmembrane transporter activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0043186: P granule	0.00E+00
2	GO:0005784: Sec61 translocon complex	0.00E+00
3	GO:0031205: endoplasmic reticulum Sec complex	0.00E+00
4	GO:0005832: chaperonin-containing T-complex	0.00E+00
5	GO:0005840: ribosome	6.28E-123
6	GO:0022625: cytosolic large ribosomal subunit	7.43E-114
7	GO:0022626: cytosolic ribosome	5.46E-112
8	GO:0022627: cytosolic small ribosomal subunit	1.20E-76
9	GO:0005829: cytosol	8.36E-47
10	GO:0005730: nucleolus	7.91E-45
11	GO:0005737: cytoplasm	1.39E-39
12	GO:0009506: plasmodesma	4.55E-28
13	GO:0015934: large ribosomal subunit	5.04E-19
14	GO:0005774: vacuolar membrane	1.56E-17
15	GO:0015935: small ribosomal subunit	6.15E-13
16	GO:0016020: membrane	3.81E-11
17	GO:0005773: vacuole	4.95E-11
18	GO:0005618: cell wall	4.61E-08
19	GO:0005732: small nucleolar ribonucleoprotein complex	1.85E-07
20	GO:0000502: proteasome complex	4.24E-07
21	GO:0005742: mitochondrial outer membrane translocase complex	1.71E-06
22	GO:0005839: proteasome core complex	2.72E-06
23	GO:0071011: precatalytic spliceosome	4.05E-06
24	GO:0071013: catalytic step 2 spliceosome	8.23E-06
25	GO:0005886: plasma membrane	9.31E-06
26	GO:0005665: DNA-directed RNA polymerase II, core complex	1.12E-05
27	GO:0019013: viral nucleocapsid	1.49E-05
28	GO:0009507: chloroplast	2.46E-05
29	GO:0005853: eukaryotic translation elongation factor 1 complex	5.62E-05
30	GO:0034719: SMN-Sm protein complex	5.62E-05
31	GO:0005681: spliceosomal complex	8.97E-05
32	GO:0005736: DNA-directed RNA polymerase I complex	9.03E-05
33	GO:0005685: U1 snRNP	9.03E-05
34	GO:0005666: DNA-directed RNA polymerase III complex	1.17E-04
35	GO:0015030: Cajal body	1.17E-04
36	GO:0000418: DNA-directed RNA polymerase IV complex	1.49E-04
37	GO:0005852: eukaryotic translation initiation factor 3 complex	1.85E-04
38	GO:0005682: U5 snRNP	2.01E-04
39	GO:0032040: small-subunit processome	2.25E-04
40	GO:0005687: U4 snRNP	3.03E-04
41	GO:0097526: spliceosomal tri-snRNP complex	3.03E-04
42	GO:0031428: box C/D snoRNP complex	4.24E-04
43	GO:0000419: DNA-directed RNA polymerase V complex	4.32E-04
44	GO:0005758: mitochondrial intermembrane space	4.96E-04
45	GO:0005689: U12-type spliceosomal complex	5.63E-04
46	GO:0030686: 90S preribosome	6.28E-04
47	GO:0005741: mitochondrial outer membrane	6.38E-04
48	GO:0005744: mitochondrial inner membrane presequence translocase complex	8.92E-04
49	GO:0005688: U6 snRNP	8.95E-04
50	GO:0005743: mitochondrial inner membrane	9.59E-04
51	GO:0046930: pore complex	1.09E-03
52	GO:0019773: proteasome core complex, alpha-subunit complex	1.09E-03
53	GO:0046540: U4/U6 x U5 tri-snRNP complex	1.09E-03
54	GO:0071010: prespliceosome	1.35E-03
55	GO:0005686: U2 snRNP	1.80E-03
56	GO:0046861: glyoxysomal membrane	2.23E-03
57	GO:0034715: pICln-Sm protein complex	2.23E-03
58	GO:0005834: heterotrimeric G-protein complex	2.86E-03
59	GO:1990726: Lsm1-7-Pat1 complex	3.23E-03
60	GO:0016471: vacuolar proton-transporting V-type ATPase complex	4.36E-03
61	GO:0000974: Prp19 complex	6.95E-03
62	GO:0000243: commitment complex	6.95E-03
63	GO:0016282: eukaryotic 43S preinitiation complex	6.95E-03
64	GO:0033290: eukaryotic 48S preinitiation complex	8.41E-03
65	GO:0016272: prefoldin complex	8.41E-03
66	GO:0031359: integral component of chloroplast outer membrane	9.96E-03
67	GO:0071004: U2-type prespliceosome	1.16E-02
68	GO:0009514: glyoxysome	1.34E-02
69	GO:0005622: intracellular	1.37E-02
70	GO:0030529: intracellular ribonucleoprotein complex	1.54E-02
71	GO:0016604: nuclear body	1.71E-02
72	GO:0008541: proteasome regulatory particle, lid subcomplex	2.12E-02
73	GO:0048471: perinuclear region of cytoplasm	2.12E-02
74	GO:0031307: integral component of mitochondrial outer membrane	2.33E-02
75	GO:0005769: early endosome	3.27E-02
76	GO:0070469: respiratory chain	3.77E-02
77	GO:0005635: nuclear envelope	4.75E-02