co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G67350

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015822: ornithine transport	0.00E+00
2	GO:0009236: cobalamin biosynthetic process	0.00E+00
3	GO:0018293: protein-FAD linkage	0.00E+00
4	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
5	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	2.76E-11
6	GO:0009853: photorespiration	6.79E-11
7	GO:0009963: positive regulation of flavonoid biosynthetic process	1.83E-05
8	GO:0055114: oxidation-reduction process	4.89E-05
9	GO:0006099: tricarboxylic acid cycle	6.67E-05
10	GO:0019354: siroheme biosynthetic process	2.16E-04
11	GO:0031539: positive regulation of anthocyanin metabolic process	2.16E-04
12	GO:0031468: nuclear envelope reassembly	2.16E-04
13	GO:0009852: auxin catabolic process	2.16E-04
14	GO:0000066: mitochondrial ornithine transport	2.16E-04
15	GO:0022900: electron transport chain	2.29E-04
16	GO:0009245: lipid A biosynthetic process	2.78E-04
17	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	4.81E-04
18	GO:0080026: response to indolebutyric acid	4.81E-04
19	GO:0006432: phenylalanyl-tRNA aminoacylation	4.81E-04
20	GO:0006006: glucose metabolic process	5.83E-04
21	GO:0015940: pantothenate biosynthetic process	7.83E-04
22	GO:0071492: cellular response to UV-A	7.83E-04
23	GO:0045793: positive regulation of cell size	7.83E-04
24	GO:0006760: folic acid-containing compound metabolic process	7.83E-04
25	GO:0015992: proton transport	1.09E-03
26	GO:0006107: oxaloacetate metabolic process	1.12E-03
27	GO:0006241: CTP biosynthetic process	1.12E-03
28	GO:0009399: nitrogen fixation	1.12E-03
29	GO:0006165: nucleoside diphosphate phosphorylation	1.12E-03
30	GO:0006228: UTP biosynthetic process	1.12E-03
31	GO:0009647: skotomorphogenesis	1.12E-03
32	GO:0080024: indolebutyric acid metabolic process	1.12E-03
33	GO:0032877: positive regulation of DNA endoreduplication	1.12E-03
34	GO:0006012: galactose metabolic process	1.29E-03
35	GO:0071486: cellular response to high light intensity	1.48E-03
36	GO:0009765: photosynthesis, light harvesting	1.48E-03
37	GO:0006183: GTP biosynthetic process	1.48E-03
38	GO:0006221: pyrimidine nucleotide biosynthetic process	1.48E-03
39	GO:0009649: entrainment of circadian clock	1.48E-03
40	GO:0032366: intracellular sterol transport	1.48E-03
41	GO:0044205: 'de novo' UMP biosynthetic process	1.48E-03
42	GO:0006542: glutamine biosynthetic process	1.48E-03
43	GO:0070534: protein K63-linked ubiquitination	1.48E-03
44	GO:0051781: positive regulation of cell division	1.48E-03
45	GO:0015991: ATP hydrolysis coupled proton transport	1.63E-03
46	GO:0080022: primary root development	1.63E-03
47	GO:0046283: anthocyanin-containing compound metabolic process	1.89E-03
48	GO:0015986: ATP synthesis coupled proton transport	1.89E-03
49	GO:0043248: proteasome assembly	2.33E-03
50	GO:0070814: hydrogen sulfide biosynthetic process	2.33E-03
51	GO:0006796: phosphate-containing compound metabolic process	2.33E-03
52	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	2.33E-03
53	GO:0006301: postreplication repair	2.33E-03
54	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.33E-03
55	GO:0000054: ribosomal subunit export from nucleus	2.80E-03
56	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	3.30E-03
57	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	3.30E-03
58	GO:0022904: respiratory electron transport chain	3.30E-03
59	GO:0032880: regulation of protein localization	3.30E-03
60	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.82E-03
61	GO:0000028: ribosomal small subunit assembly	3.82E-03
62	GO:0048658: anther wall tapetum development	3.82E-03
63	GO:0009231: riboflavin biosynthetic process	3.82E-03
64	GO:0010099: regulation of photomorphogenesis	4.38E-03
65	GO:0098656: anion transmembrane transport	4.95E-03
66	GO:0080144: amino acid homeostasis	4.95E-03
67	GO:0006754: ATP biosynthetic process	4.95E-03
68	GO:0009060: aerobic respiration	4.95E-03
69	GO:0009970: cellular response to sulfate starvation	6.18E-03
70	GO:0000103: sulfate assimilation	6.18E-03
71	GO:0009641: shade avoidance	6.18E-03
72	GO:0009640: photomorphogenesis	6.63E-03
73	GO:0052544: defense response by callose deposition in cell wall	6.84E-03
74	GO:0042254: ribosome biogenesis	7.18E-03
75	GO:0006790: sulfur compound metabolic process	7.51E-03
76	GO:0006820: anion transport	7.51E-03
77	GO:0006412: translation	7.66E-03
78	GO:0006807: nitrogen compound metabolic process	8.22E-03
79	GO:0006108: malate metabolic process	8.22E-03
80	GO:0009585: red, far-red light phototransduction	8.94E-03
81	GO:0010224: response to UV-B	9.26E-03
82	GO:0007030: Golgi organization	9.69E-03
83	GO:0019853: L-ascorbic acid biosynthetic process	9.69E-03
84	GO:0010039: response to iron ion	9.69E-03
85	GO:0042753: positive regulation of circadian rhythm	1.05E-02
86	GO:0006406: mRNA export from nucleus	1.12E-02
87	GO:0006487: protein N-linked glycosylation	1.12E-02
88	GO:0019915: lipid storage	1.29E-02
89	GO:0061077: chaperone-mediated protein folding	1.29E-02
90	GO:0010431: seed maturation	1.29E-02
91	GO:0010017: red or far-red light signaling pathway	1.37E-02
92	GO:0016226: iron-sulfur cluster assembly	1.37E-02
93	GO:0034220: ion transmembrane transport	1.74E-02
94	GO:0000413: protein peptidyl-prolyl isomerization	1.74E-02
95	GO:0006606: protein import into nucleus	1.74E-02
96	GO:0009958: positive gravitropism	1.83E-02
97	GO:0006662: glycerol ether metabolic process	1.83E-02
98	GO:0061025: membrane fusion	1.93E-02
99	GO:0006633: fatty acid biosynthetic process	2.01E-02
100	GO:0010193: response to ozone	2.12E-02
101	GO:0000302: response to reactive oxygen species	2.12E-02
102	GO:0016132: brassinosteroid biosynthetic process	2.12E-02
103	GO:0009630: gravitropism	2.23E-02
104	GO:0006979: response to oxidative stress	2.39E-02
105	GO:0010252: auxin homeostasis	2.44E-02
106	GO:0009617: response to bacterium	2.64E-02
107	GO:0000910: cytokinesis	2.65E-02
108	GO:0016126: sterol biosynthetic process	2.76E-02
109	GO:0009735: response to cytokinin	2.78E-02
110	GO:0010029: regulation of seed germination	2.87E-02
111	GO:0042128: nitrate assimilation	2.99E-02
112	GO:0048573: photoperiodism, flowering	3.10E-02
113	GO:0009826: unidimensional cell growth	3.29E-02
114	GO:0048767: root hair elongation	3.46E-02
115	GO:0009407: toxin catabolic process	3.58E-02
116	GO:0010218: response to far red light	3.58E-02
117	GO:0010119: regulation of stomatal movement	3.70E-02
118	GO:0000724: double-strand break repair via homologous recombination	3.82E-02
119	GO:0034599: cellular response to oxidative stress	4.07E-02
120	GO:0006810: transport	4.13E-02
121	GO:0006839: mitochondrial transport	4.33E-02
122	GO:0006631: fatty acid metabolic process	4.46E-02
123	GO:0010114: response to red light	4.73E-02
124	GO:0009926: auxin polar transport	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
2	GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity	0.00E+00
3	GO:0050152: omega-amidase activity	0.00E+00
4	GO:0051266: sirohydrochlorin ferrochelatase activity	0.00E+00
5	GO:0004746: riboflavin synthase activity	0.00E+00
6	GO:0004151: dihydroorotase activity	0.00E+00
7	GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity	0.00E+00
8	GO:0015391: nucleobase:cation symporter activity	0.00E+00
9	GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity	0.00E+00
10	GO:0016852: sirohydrochlorin cobaltochelatase activity	0.00E+00
11	GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
12	GO:0008137: NADH dehydrogenase (ubiquinone) activity	6.01E-09
13	GO:0004129: cytochrome-c oxidase activity	1.64E-05
14	GO:0050897: cobalt ion binding	5.15E-05
15	GO:0003735: structural constituent of ribosome	5.24E-05
16	GO:0031177: phosphopantetheine binding	7.90E-05
17	GO:0000035: acyl binding	1.10E-04
18	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.45E-04
19	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.52E-04
20	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.85E-04
21	GO:0004034: aldose 1-epimerase activity	1.85E-04
22	GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity	2.16E-04
23	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	2.16E-04
24	GO:0080047: GDP-L-galactose phosphorylase activity	2.16E-04
25	GO:0000248: C-5 sterol desaturase activity	2.16E-04
26	GO:0080048: GDP-D-glucose phosphorylase activity	2.16E-04
27	GO:0000064: L-ornithine transmembrane transporter activity	4.81E-04
28	GO:0004826: phenylalanine-tRNA ligase activity	4.81E-04
29	GO:0051539: 4 iron, 4 sulfur cluster binding	7.64E-04
30	GO:0005047: signal recognition particle binding	7.83E-04
31	GO:0004781: sulfate adenylyltransferase (ATP) activity	7.83E-04
32	GO:0070180: large ribosomal subunit rRNA binding	7.83E-04
33	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.08E-03
34	GO:0004298: threonine-type endopeptidase activity	1.09E-03
35	GO:0004550: nucleoside diphosphate kinase activity	1.12E-03
36	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.12E-03
37	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	1.48E-03
38	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.48E-03
39	GO:0050302: indole-3-acetaldehyde oxidase activity	1.48E-03
40	GO:0004576: oligosaccharyl transferase activity	1.48E-03
41	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.48E-03
42	GO:0010011: auxin binding	1.48E-03
43	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.89E-03
44	GO:0008177: succinate dehydrogenase (ubiquinone) activity	1.89E-03
45	GO:0016651: oxidoreductase activity, acting on NAD(P)H	1.89E-03
46	GO:0005496: steroid binding	1.89E-03
47	GO:0004356: glutamate-ammonia ligase activity	1.89E-03
48	GO:0051117: ATPase binding	2.33E-03
49	GO:0080046: quercetin 4'-O-glucosyltransferase activity	2.33E-03
50	GO:0004427: inorganic diphosphatase activity	3.30E-03
51	GO:0008143: poly(A) binding	3.30E-03
52	GO:0005085: guanyl-nucleotide exchange factor activity	3.30E-03
53	GO:0015288: porin activity	3.82E-03
54	GO:0008308: voltage-gated anion channel activity	4.38E-03
55	GO:0001055: RNA polymerase II activity	5.56E-03
56	GO:0047617: acyl-CoA hydrolase activity	5.56E-03
57	GO:0008047: enzyme activator activity	6.18E-03
58	GO:0008794: arsenate reductase (glutaredoxin) activity	6.84E-03
59	GO:0046961: proton-transporting ATPase activity, rotational mechanism	6.84E-03
60	GO:0016788: hydrolase activity, acting on ester bonds	7.18E-03
61	GO:0000049: tRNA binding	7.51E-03
62	GO:0004089: carbonate dehydratase activity	8.22E-03
63	GO:0004175: endopeptidase activity	8.94E-03
64	GO:0043130: ubiquitin binding	1.12E-02
65	GO:0005528: FK506 binding	1.12E-02
66	GO:0051536: iron-sulfur cluster binding	1.12E-02
67	GO:0022857: transmembrane transporter activity	1.20E-02
68	GO:0015035: protein disulfide oxidoreductase activity	1.31E-02
69	GO:0047134: protein-disulfide reductase activity	1.64E-02
70	GO:0004791: thioredoxin-disulfide reductase activity	1.93E-02
71	GO:0016853: isomerase activity	1.93E-02
72	GO:0004872: receptor activity	2.02E-02
73	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.33E-02
74	GO:0016597: amino acid binding	2.65E-02
75	GO:0003824: catalytic activity	2.71E-02
76	GO:0015250: water channel activity	2.76E-02
77	GO:0051213: dioxygenase activity	2.76E-02
78	GO:0042802: identical protein binding	2.81E-02
79	GO:0016168: chlorophyll binding	2.87E-02
80	GO:0016491: oxidoreductase activity	3.53E-02
81	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.95E-02
82	GO:0050661: NADP binding	4.33E-02
83	GO:0004364: glutathione transferase activity	4.59E-02
84	GO:0052689: carboxylic ester hydrolase activity	4.67E-02
85	GO:0005507: copper ion binding	4.80E-02
86	GO:0043621: protein self-association	5.00E-02
87	GO:0051537: 2 iron, 2 sulfur cluster binding	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0016469: proton-transporting two-sector ATPase complex	0.00E+00
2	GO:0005747: mitochondrial respiratory chain complex I	6.64E-25
3	GO:0045271: respiratory chain complex I	3.14E-14
4	GO:0005739: mitochondrion	1.52E-10
5	GO:0031966: mitochondrial membrane	5.35E-10
6	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.15E-08
7	GO:0005829: cytosol	4.28E-07
8	GO:0005750: mitochondrial respiratory chain complex III	6.41E-07
9	GO:0005758: mitochondrial intermembrane space	1.39E-06
10	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3.46E-06
11	GO:0045273: respiratory chain complex II	3.46E-06
12	GO:0005840: ribosome	4.04E-06
13	GO:0009536: plastid	7.86E-06
14	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	3.35E-05
15	GO:0005746: mitochondrial respiratory chain	5.37E-05
16	GO:0005773: vacuole	1.23E-04
17	GO:0000502: proteasome complex	1.67E-04
18	GO:0000152: nuclear ubiquitin ligase complex	2.16E-04
19	GO:0019773: proteasome core complex, alpha-subunit complex	2.29E-04
20	GO:0016020: membrane	8.03E-04
21	GO:0070469: respiratory chain	9.92E-04
22	GO:0005774: vacuolar membrane	1.01E-03
23	GO:0005839: proteasome core complex	1.09E-03
24	GO:0033180: proton-transporting V-type ATPase, V1 domain	1.12E-03
25	GO:1990726: Lsm1-7-Pat1 complex	1.12E-03
26	GO:0031372: UBC13-MMS2 complex	1.48E-03
27	GO:0016471: vacuolar proton-transporting V-type ATPase complex	1.48E-03
28	GO:0008250: oligosaccharyltransferase complex	1.89E-03
29	GO:0016591: DNA-directed RNA polymerase II, holoenzyme	1.89E-03
30	GO:0022626: cytosolic ribosome	1.89E-03
31	GO:0022625: cytosolic large ribosomal subunit	2.04E-03
32	GO:0031463: Cul3-RING ubiquitin ligase complex	2.33E-03
33	GO:0005788: endoplasmic reticulum lumen	3.30E-03
34	GO:0009507: chloroplast	3.37E-03
35	GO:0005759: mitochondrial matrix	3.57E-03
36	GO:0005688: U6 snRNP	3.82E-03
37	GO:0046540: U4/U6 x U5 tri-snRNP complex	4.38E-03
38	GO:0046930: pore complex	4.38E-03
39	GO:0005763: mitochondrial small ribosomal subunit	4.95E-03
40	GO:0016604: nuclear body	5.56E-03
41	GO:0071011: precatalytic spliceosome	5.56E-03
42	GO:0000418: DNA-directed RNA polymerase IV complex	6.18E-03
43	GO:0008541: proteasome regulatory particle, lid subcomplex	6.84E-03
44	GO:0071013: catalytic step 2 spliceosome	6.84E-03
45	GO:0005665: DNA-directed RNA polymerase II, core complex	7.51E-03
46	GO:0005777: peroxisome	1.01E-02
47	GO:0000419: DNA-directed RNA polymerase V complex	1.05E-02
48	GO:0016607: nuclear speck	1.09E-02
49	GO:0005741: mitochondrial outer membrane	1.29E-02
50	GO:0009543: chloroplast thylakoid lumen	1.60E-02
51	GO:0009523: photosystem II	2.02E-02
52	GO:0000932: P-body	2.76E-02
53	GO:0000325: plant-type vacuole	3.70E-02
54	GO:0015934: large ribosomal subunit	3.70E-02