GO Enrichment Analysis of Co-expressed Genes with
AT1G66670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 2 | GO:0009583: detection of light stimulus | 0.00E+00 |
| 3 | GO:0046294: formaldehyde catabolic process | 0.00E+00 |
| 4 | GO:0016093: polyprenol metabolic process | 0.00E+00 |
| 5 | GO:0010477: response to sulfur dioxide | 0.00E+00 |
| 6 | GO:0045747: positive regulation of Notch signaling pathway | 0.00E+00 |
| 7 | GO:0071000: response to magnetism | 0.00E+00 |
| 8 | GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | 0.00E+00 |
| 9 | GO:0019279: L-methionine biosynthetic process from L-homoserine via cystathionine | 0.00E+00 |
| 10 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 11 | GO:0009661: chromoplast organization | 0.00E+00 |
| 12 | GO:0006720: isoprenoid metabolic process | 0.00E+00 |
| 13 | GO:0055114: oxidation-reduction process | 3.66E-07 |
| 14 | GO:0019509: L-methionine salvage from methylthioadenosine | 5.98E-07 |
| 15 | GO:0010117: photoprotection | 3.07E-05 |
| 16 | GO:0006555: methionine metabolic process | 4.59E-05 |
| 17 | GO:0016487: farnesol metabolic process | 1.54E-04 |
| 18 | GO:0071266: 'de novo' L-methionine biosynthetic process | 1.54E-04 |
| 19 | GO:0019343: cysteine biosynthetic process via cystathionine | 1.54E-04 |
| 20 | GO:0019346: transsulfuration | 1.54E-04 |
| 21 | GO:0072387: flavin adenine dinucleotide metabolic process | 1.54E-04 |
| 22 | GO:0010343: singlet oxygen-mediated programmed cell death | 3.51E-04 |
| 23 | GO:1901529: positive regulation of anion channel activity | 3.51E-04 |
| 24 | GO:2000030: regulation of response to red or far red light | 3.51E-04 |
| 25 | GO:2000071: regulation of defense response by callose deposition | 3.51E-04 |
| 26 | GO:0010617: circadian regulation of calcium ion oscillation | 3.51E-04 |
| 27 | GO:0099402: plant organ development | 3.51E-04 |
| 28 | GO:0019441: tryptophan catabolic process to kynurenine | 3.51E-04 |
| 29 | GO:1904143: positive regulation of carotenoid biosynthetic process | 3.51E-04 |
| 30 | GO:0080183: response to photooxidative stress | 3.51E-04 |
| 31 | GO:0016122: xanthophyll metabolic process | 3.51E-04 |
| 32 | GO:2000377: regulation of reactive oxygen species metabolic process | 5.74E-04 |
| 33 | GO:1902448: positive regulation of shade avoidance | 5.75E-04 |
| 34 | GO:0019419: sulfate reduction | 5.75E-04 |
| 35 | GO:1901672: positive regulation of systemic acquired resistance | 5.75E-04 |
| 36 | GO:1901562: response to paraquat | 5.75E-04 |
| 37 | GO:0015940: pantothenate biosynthetic process | 5.75E-04 |
| 38 | GO:0010351: lithium ion transport | 5.75E-04 |
| 39 | GO:0016226: iron-sulfur cluster assembly | 7.56E-04 |
| 40 | GO:1901332: negative regulation of lateral root development | 8.23E-04 |
| 41 | GO:0010118: stomatal movement | 1.04E-03 |
| 42 | GO:0015994: chlorophyll metabolic process | 1.09E-03 |
| 43 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.09E-03 |
| 44 | GO:1902347: response to strigolactone | 1.09E-03 |
| 45 | GO:0000003: reproduction | 1.09E-03 |
| 46 | GO:0034613: cellular protein localization | 1.09E-03 |
| 47 | GO:0006646: phosphatidylethanolamine biosynthetic process | 1.09E-03 |
| 48 | GO:0070534: protein K63-linked ubiquitination | 1.09E-03 |
| 49 | GO:0008654: phospholipid biosynthetic process | 1.28E-03 |
| 50 | GO:0018344: protein geranylgeranylation | 1.38E-03 |
| 51 | GO:0016120: carotene biosynthetic process | 1.38E-03 |
| 52 | GO:0098719: sodium ion import across plasma membrane | 1.38E-03 |
| 53 | GO:0046283: anthocyanin-containing compound metabolic process | 1.38E-03 |
| 54 | GO:0007094: mitotic spindle assembly checkpoint | 1.38E-03 |
| 55 | GO:1901371: regulation of leaf morphogenesis | 1.70E-03 |
| 56 | GO:0060918: auxin transport | 1.70E-03 |
| 57 | GO:0006301: postreplication repair | 1.70E-03 |
| 58 | GO:1901001: negative regulation of response to salt stress | 2.03E-03 |
| 59 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 2.03E-03 |
| 60 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 2.03E-03 |
| 61 | GO:0010189: vitamin E biosynthetic process | 2.03E-03 |
| 62 | GO:0010310: regulation of hydrogen peroxide metabolic process | 2.03E-03 |
| 63 | GO:0051510: regulation of unidimensional cell growth | 2.39E-03 |
| 64 | GO:0010038: response to metal ion | 2.39E-03 |
| 65 | GO:0050790: regulation of catalytic activity | 2.39E-03 |
| 66 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.77E-03 |
| 67 | GO:0030091: protein repair | 2.77E-03 |
| 68 | GO:0050821: protein stabilization | 2.77E-03 |
| 69 | GO:0006102: isocitrate metabolic process | 2.77E-03 |
| 70 | GO:0015996: chlorophyll catabolic process | 3.16E-03 |
| 71 | GO:0009880: embryonic pattern specification | 3.16E-03 |
| 72 | GO:0046685: response to arsenic-containing substance | 3.58E-03 |
| 73 | GO:0009638: phototropism | 4.01E-03 |
| 74 | GO:0051453: regulation of intracellular pH | 4.01E-03 |
| 75 | GO:1900426: positive regulation of defense response to bacterium | 4.01E-03 |
| 76 | GO:0000103: sulfate assimilation | 4.46E-03 |
| 77 | GO:0009688: abscisic acid biosynthetic process | 4.46E-03 |
| 78 | GO:0009682: induced systemic resistance | 4.92E-03 |
| 79 | GO:0006879: cellular iron ion homeostasis | 4.92E-03 |
| 80 | GO:0006790: sulfur compound metabolic process | 5.41E-03 |
| 81 | GO:0051603: proteolysis involved in cellular protein catabolic process | 5.75E-03 |
| 82 | GO:0009785: blue light signaling pathway | 5.91E-03 |
| 83 | GO:0009691: cytokinin biosynthetic process | 5.91E-03 |
| 84 | GO:0010075: regulation of meristem growth | 5.91E-03 |
| 85 | GO:0048440: carpel development | 6.42E-03 |
| 86 | GO:0006508: proteolysis | 7.05E-03 |
| 87 | GO:0032259: methylation | 7.81E-03 |
| 88 | GO:0019344: cysteine biosynthetic process | 8.05E-03 |
| 89 | GO:0009116: nucleoside metabolic process | 8.05E-03 |
| 90 | GO:0006487: protein N-linked glycosylation | 8.05E-03 |
| 91 | GO:0061077: chaperone-mediated protein folding | 9.22E-03 |
| 92 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 9.82E-03 |
| 93 | GO:0009693: ethylene biosynthetic process | 1.04E-02 |
| 94 | GO:0001944: vasculature development | 1.04E-02 |
| 95 | GO:0006012: galactose metabolic process | 1.04E-02 |
| 96 | GO:0009058: biosynthetic process | 1.05E-02 |
| 97 | GO:0006817: phosphate ion transport | 1.11E-02 |
| 98 | GO:0010051: xylem and phloem pattern formation | 1.24E-02 |
| 99 | GO:0006520: cellular amino acid metabolic process | 1.31E-02 |
| 100 | GO:0009646: response to absence of light | 1.37E-02 |
| 101 | GO:0006814: sodium ion transport | 1.37E-02 |
| 102 | GO:0042752: regulation of circadian rhythm | 1.37E-02 |
| 103 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.52E-02 |
| 104 | GO:0002229: defense response to oomycetes | 1.52E-02 |
| 105 | GO:0030163: protein catabolic process | 1.66E-02 |
| 106 | GO:0006464: cellular protein modification process | 1.74E-02 |
| 107 | GO:0071805: potassium ion transmembrane transport | 1.81E-02 |
| 108 | GO:0042128: nitrate assimilation | 2.13E-02 |
| 109 | GO:0006974: cellular response to DNA damage stimulus | 2.13E-02 |
| 110 | GO:0006950: response to stress | 2.21E-02 |
| 111 | GO:0006970: response to osmotic stress | 2.29E-02 |
| 112 | GO:0018298: protein-chromophore linkage | 2.38E-02 |
| 113 | GO:0009407: toxin catabolic process | 2.55E-02 |
| 114 | GO:0010218: response to far red light | 2.55E-02 |
| 115 | GO:0048527: lateral root development | 2.64E-02 |
| 116 | GO:0010043: response to zinc ion | 2.64E-02 |
| 117 | GO:0007568: aging | 2.64E-02 |
| 118 | GO:0009853: photorespiration | 2.81E-02 |
| 119 | GO:0009867: jasmonic acid mediated signaling pathway | 2.81E-02 |
| 120 | GO:0009637: response to blue light | 2.81E-02 |
| 121 | GO:0006099: tricarboxylic acid cycle | 2.90E-02 |
| 122 | GO:0045454: cell redox homeostasis | 3.16E-02 |
| 123 | GO:0009640: photomorphogenesis | 3.37E-02 |
| 124 | GO:0010114: response to red light | 3.37E-02 |
| 125 | GO:0042546: cell wall biogenesis | 3.47E-02 |
| 126 | GO:0009644: response to high light intensity | 3.56E-02 |
| 127 | GO:0016042: lipid catabolic process | 3.78E-02 |
| 128 | GO:0031347: regulation of defense response | 3.86E-02 |
| 129 | GO:0006629: lipid metabolic process | 3.89E-02 |
| 130 | GO:0042538: hyperosmotic salinity response | 3.96E-02 |
| 131 | GO:0048364: root development | 4.05E-02 |
| 132 | GO:0009809: lignin biosynthetic process | 4.17E-02 |
| 133 | GO:0006486: protein glycosylation | 4.17E-02 |
| 134 | GO:0010224: response to UV-B | 4.27E-02 |
| 135 | GO:0008152: metabolic process | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0052671: geranylgeraniol kinase activity | 0.00E+00 |
| 3 | GO:0018738: S-formylglutathione hydrolase activity | 0.00E+00 |
| 4 | GO:0052669: CTP:2-trans,-6-trans-farnesol kinase activity | 0.00E+00 |
| 5 | GO:0008482: sulfite oxidase activity | 0.00E+00 |
| 6 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 7 | GO:0052670: geraniol kinase activity | 0.00E+00 |
| 8 | GO:0052668: farnesol kinase activity | 0.00E+00 |
| 9 | GO:0050342: tocopherol O-methyltransferase activity | 0.00E+00 |
| 10 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 4.34E-06 |
| 11 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 1.01E-05 |
| 12 | GO:0004733: pyridoxamine-phosphate oxidase activity | 1.54E-04 |
| 13 | GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | 1.54E-04 |
| 14 | GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | 1.54E-04 |
| 15 | GO:0016780: phosphotransferase activity, for other substituted phosphate groups | 1.54E-04 |
| 16 | GO:0004121: cystathionine beta-lyase activity | 1.54E-04 |
| 17 | GO:0016783: sulfurtransferase activity | 1.54E-04 |
| 18 | GO:0004307: ethanolaminephosphotransferase activity | 1.54E-04 |
| 19 | GO:0019707: protein-cysteine S-acyltransferase activity | 1.54E-04 |
| 20 | GO:0030611: arsenate reductase activity | 1.54E-04 |
| 21 | GO:0008782: adenosylhomocysteine nucleosidase activity | 1.54E-04 |
| 22 | GO:0008930: methylthioadenosine nucleosidase activity | 1.54E-04 |
| 23 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.54E-04 |
| 24 | GO:0045153: electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity | 1.54E-04 |
| 25 | GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity | 1.54E-04 |
| 26 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 1.54E-04 |
| 27 | GO:0004123: cystathionine gamma-lyase activity | 1.54E-04 |
| 28 | GO:0071949: FAD binding | 1.70E-04 |
| 29 | GO:0030572: phosphatidyltransferase activity | 3.51E-04 |
| 30 | GO:0004046: aminoacylase activity | 3.51E-04 |
| 31 | GO:0004142: diacylglycerol cholinephosphotransferase activity | 3.51E-04 |
| 32 | GO:0009973: adenylyl-sulfate reductase activity | 3.51E-04 |
| 33 | GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity | 3.51E-04 |
| 34 | GO:0004061: arylformamidase activity | 3.51E-04 |
| 35 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 3.51E-04 |
| 36 | GO:0033741: adenylyl-sulfate reductase (glutathione) activity | 3.51E-04 |
| 37 | GO:0005528: FK506 binding | 5.74E-04 |
| 38 | GO:0004848: ureidoglycolate hydrolase activity | 5.75E-04 |
| 39 | GO:0004557: alpha-galactosidase activity | 5.75E-04 |
| 40 | GO:0004663: Rab geranylgeranyltransferase activity | 5.75E-04 |
| 41 | GO:0003962: cystathionine gamma-synthase activity | 5.75E-04 |
| 42 | GO:0004792: thiosulfate sulfurtransferase activity | 8.23E-04 |
| 43 | GO:0009882: blue light photoreceptor activity | 8.23E-04 |
| 44 | GO:0003824: catalytic activity | 9.32E-04 |
| 45 | GO:0016787: hydrolase activity | 1.02E-03 |
| 46 | GO:0016491: oxidoreductase activity | 1.33E-03 |
| 47 | GO:0030151: molybdenum ion binding | 1.38E-03 |
| 48 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.70E-03 |
| 49 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.70E-03 |
| 50 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.70E-03 |
| 51 | GO:0015081: sodium ion transmembrane transporter activity | 1.70E-03 |
| 52 | GO:0051920: peroxiredoxin activity | 2.03E-03 |
| 53 | GO:0070300: phosphatidic acid binding | 2.03E-03 |
| 54 | GO:0016621: cinnamoyl-CoA reductase activity | 2.39E-03 |
| 55 | GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity | 2.77E-03 |
| 56 | GO:0004034: aldose 1-epimerase activity | 2.77E-03 |
| 57 | GO:0016209: antioxidant activity | 2.77E-03 |
| 58 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 3.58E-03 |
| 59 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 3.58E-03 |
| 60 | GO:0004601: peroxidase activity | 3.83E-03 |
| 61 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.82E-03 |
| 62 | GO:0015386: potassium:proton antiporter activity | 4.92E-03 |
| 63 | GO:0004129: cytochrome-c oxidase activity | 4.92E-03 |
| 64 | GO:0008794: arsenate reductase (glutaredoxin) activity | 4.92E-03 |
| 65 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.91E-03 |
| 66 | GO:0042803: protein homodimerization activity | 6.71E-03 |
| 67 | GO:0004725: protein tyrosine phosphatase activity | 7.49E-03 |
| 68 | GO:0051536: iron-sulfur cluster binding | 8.05E-03 |
| 69 | GO:0004176: ATP-dependent peptidase activity | 9.22E-03 |
| 70 | GO:0022891: substrate-specific transmembrane transporter activity | 1.04E-02 |
| 71 | GO:0030170: pyridoxal phosphate binding | 1.10E-02 |
| 72 | GO:0016853: isomerase activity | 1.37E-02 |
| 73 | GO:0010181: FMN binding | 1.37E-02 |
| 74 | GO:0050662: coenzyme binding | 1.37E-02 |
| 75 | GO:0004197: cysteine-type endopeptidase activity | 1.59E-02 |
| 76 | GO:0015385: sodium:proton antiporter activity | 1.66E-02 |
| 77 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.66E-02 |
| 78 | GO:0008483: transaminase activity | 1.81E-02 |
| 79 | GO:0008237: metallopeptidase activity | 1.81E-02 |
| 80 | GO:0004672: protein kinase activity | 2.05E-02 |
| 81 | GO:0008168: methyltransferase activity | 2.05E-02 |
| 82 | GO:0016788: hydrolase activity, acting on ester bonds | 2.17E-02 |
| 83 | GO:0004806: triglyceride lipase activity | 2.21E-02 |
| 84 | GO:0008236: serine-type peptidase activity | 2.29E-02 |
| 85 | GO:0004222: metalloendopeptidase activity | 2.55E-02 |
| 86 | GO:0008233: peptidase activity | 2.59E-02 |
| 87 | GO:0050897: cobalt ion binding | 2.64E-02 |
| 88 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.81E-02 |
| 89 | GO:0052689: carboxylic ester hydrolase activity | 2.91E-02 |
| 90 | GO:0004364: glutathione transferase activity | 3.27E-02 |
| 91 | GO:0004185: serine-type carboxypeptidase activity | 3.37E-02 |
| 92 | GO:0005198: structural molecule activity | 3.66E-02 |
| 93 | GO:0015293: symporter activity | 3.66E-02 |
| 94 | GO:0051287: NAD binding | 3.86E-02 |
| 95 | GO:0005506: iron ion binding | 4.04E-02 |
| 96 | GO:0016298: lipase activity | 4.27E-02 |
| 97 | GO:0031625: ubiquitin protein ligase binding | 4.48E-02 |
| 98 | GO:0008234: cysteine-type peptidase activity | 4.48E-02 |
| 99 | GO:0046872: metal ion binding | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005747: mitochondrial respiratory chain complex I | 1.03E-04 |
| 2 | GO:0031972: chloroplast intermembrane space | 1.54E-04 |
| 3 | GO:0016605: PML body | 5.75E-04 |
| 4 | GO:0005968: Rab-protein geranylgeranyltransferase complex | 8.23E-04 |
| 5 | GO:0031969: chloroplast membrane | 9.23E-04 |
| 6 | GO:0031372: UBC13-MMS2 complex | 1.09E-03 |
| 7 | GO:0009517: PSII associated light-harvesting complex II | 1.09E-03 |
| 8 | GO:0005746: mitochondrial respiratory chain | 1.38E-03 |
| 9 | GO:0031463: Cul3-RING ubiquitin ligase complex | 1.70E-03 |
| 10 | GO:0005759: mitochondrial matrix | 1.96E-03 |
| 11 | GO:0005737: cytoplasm | 4.00E-03 |
| 12 | GO:0016604: nuclear body | 4.01E-03 |
| 13 | GO:0005777: peroxisome | 4.88E-03 |
| 14 | GO:0005765: lysosomal membrane | 4.92E-03 |
| 15 | GO:0009507: chloroplast | 5.22E-03 |
| 16 | GO:0005750: mitochondrial respiratory chain complex III | 6.42E-03 |
| 17 | GO:0005764: lysosome | 6.42E-03 |
| 18 | GO:0005773: vacuole | 7.34E-03 |
| 19 | GO:0009706: chloroplast inner membrane | 7.91E-03 |
| 20 | GO:0045271: respiratory chain complex I | 8.63E-03 |
| 21 | GO:0009543: chloroplast thylakoid lumen | 9.92E-03 |
| 22 | GO:0005615: extracellular space | 1.54E-02 |
| 23 | GO:0032580: Golgi cisterna membrane | 1.74E-02 |
| 24 | GO:0016021: integral component of membrane | 1.75E-02 |
| 25 | GO:0005783: endoplasmic reticulum | 3.37E-02 |
| 26 | GO:0005768: endosome | 3.62E-02 |
| 27 | GO:0031966: mitochondrial membrane | 3.96E-02 |
| 28 | GO:0005829: cytosol | 4.60E-02 |
| 29 | GO:0005739: mitochondrion | 4.78E-02 |
| 30 | GO:0016607: nuclear speck | 4.80E-02 |
| 31 | GO:0010008: endosome membrane | 4.80E-02 |