GO Enrichment Analysis of Co-expressed Genes with
AT1G65980
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001881: receptor recycling | 0.00E+00 |
| 2 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 3 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 4 | GO:0046487: glyoxylate metabolic process | 0.00E+00 |
| 5 | GO:0007530: sex determination | 0.00E+00 |
| 6 | GO:0006412: translation | 4.27E-73 |
| 7 | GO:0042254: ribosome biogenesis | 5.58E-30 |
| 8 | GO:0000027: ribosomal large subunit assembly | 7.77E-09 |
| 9 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 1.39E-05 |
| 10 | GO:0000028: ribosomal small subunit assembly | 2.07E-05 |
| 11 | GO:0002181: cytoplasmic translation | 2.99E-05 |
| 12 | GO:1902626: assembly of large subunit precursor of preribosome | 2.99E-05 |
| 13 | GO:0009735: response to cytokinin | 2.79E-04 |
| 14 | GO:0006474: N-terminal protein amino acid acetylation | 4.43E-04 |
| 15 | GO:2001006: regulation of cellulose biosynthetic process | 4.43E-04 |
| 16 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.43E-04 |
| 17 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.43E-04 |
| 18 | GO:0032365: intracellular lipid transport | 4.43E-04 |
| 19 | GO:0006407: rRNA export from nucleus | 4.43E-04 |
| 20 | GO:0098656: anion transmembrane transport | 7.84E-04 |
| 21 | GO:0009245: lipid A biosynthetic process | 7.84E-04 |
| 22 | GO:0000387: spliceosomal snRNP assembly | 9.23E-04 |
| 23 | GO:0051603: proteolysis involved in cellular protein catabolic process | 9.43E-04 |
| 24 | GO:0045905: positive regulation of translational termination | 9.56E-04 |
| 25 | GO:0071668: plant-type cell wall assembly | 9.56E-04 |
| 26 | GO:0045901: positive regulation of translational elongation | 9.56E-04 |
| 27 | GO:0006452: translational frameshifting | 9.56E-04 |
| 28 | GO:0006820: anion transport | 1.41E-03 |
| 29 | GO:0009150: purine ribonucleotide metabolic process | 1.56E-03 |
| 30 | GO:0045793: positive regulation of cell size | 1.56E-03 |
| 31 | GO:0042256: mature ribosome assembly | 1.56E-03 |
| 32 | GO:0008333: endosome to lysosome transport | 1.56E-03 |
| 33 | GO:0000398: mRNA splicing, via spliceosome | 1.90E-03 |
| 34 | GO:0046686: response to cadmium ion | 2.06E-03 |
| 35 | GO:0006168: adenine salvage | 2.25E-03 |
| 36 | GO:0032877: positive regulation of DNA endoreduplication | 2.25E-03 |
| 37 | GO:0006166: purine ribonucleoside salvage | 2.25E-03 |
| 38 | GO:0070301: cellular response to hydrogen peroxide | 2.25E-03 |
| 39 | GO:0006107: oxaloacetate metabolic process | 2.25E-03 |
| 40 | GO:0006241: CTP biosynthetic process | 2.25E-03 |
| 41 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 2.25E-03 |
| 42 | GO:0006165: nucleoside diphosphate phosphorylation | 2.25E-03 |
| 43 | GO:0006228: UTP biosynthetic process | 2.25E-03 |
| 44 | GO:0006164: purine nucleotide biosynthetic process | 2.25E-03 |
| 45 | GO:0009113: purine nucleobase biosynthetic process | 2.25E-03 |
| 46 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.40E-03 |
| 47 | GO:0051781: positive regulation of cell division | 3.03E-03 |
| 48 | GO:0006183: GTP biosynthetic process | 3.03E-03 |
| 49 | GO:0032366: intracellular sterol transport | 3.03E-03 |
| 50 | GO:0006413: translational initiation | 3.17E-03 |
| 51 | GO:0009926: auxin polar transport | 3.37E-03 |
| 52 | GO:0044209: AMP salvage | 3.88E-03 |
| 53 | GO:0000413: protein peptidyl-prolyl isomerization | 4.65E-03 |
| 54 | GO:0006574: valine catabolic process | 4.80E-03 |
| 55 | GO:0006555: methionine metabolic process | 4.80E-03 |
| 56 | GO:0043248: proteasome assembly | 4.80E-03 |
| 57 | GO:0009793: embryo development ending in seed dormancy | 5.68E-03 |
| 58 | GO:0009554: megasporogenesis | 5.79E-03 |
| 59 | GO:0009648: photoperiodism | 5.79E-03 |
| 60 | GO:0009955: adaxial/abaxial pattern specification | 5.79E-03 |
| 61 | GO:0019509: L-methionine salvage from methylthioadenosine | 5.79E-03 |
| 62 | GO:1901001: negative regulation of response to salt stress | 5.79E-03 |
| 63 | GO:0010183: pollen tube guidance | 5.79E-03 |
| 64 | GO:0009612: response to mechanical stimulus | 5.79E-03 |
| 65 | GO:0000302: response to reactive oxygen species | 6.19E-03 |
| 66 | GO:0006464: cellular protein modification process | 7.52E-03 |
| 67 | GO:0050821: protein stabilization | 7.97E-03 |
| 68 | GO:0009690: cytokinin metabolic process | 7.97E-03 |
| 69 | GO:0006526: arginine biosynthetic process | 9.15E-03 |
| 70 | GO:0009808: lignin metabolic process | 9.15E-03 |
| 71 | GO:0022900: electron transport chain | 9.15E-03 |
| 72 | GO:0006189: 'de novo' IMP biosynthetic process | 1.04E-02 |
| 73 | GO:0048589: developmental growth | 1.04E-02 |
| 74 | GO:0009060: aerobic respiration | 1.04E-02 |
| 75 | GO:0030042: actin filament depolymerization | 1.17E-02 |
| 76 | GO:0043069: negative regulation of programmed cell death | 1.30E-02 |
| 77 | GO:0009651: response to salt stress | 1.43E-02 |
| 78 | GO:0015770: sucrose transport | 1.45E-02 |
| 79 | GO:0072593: reactive oxygen species metabolic process | 1.45E-02 |
| 80 | GO:0009853: photorespiration | 1.49E-02 |
| 81 | GO:0006099: tricarboxylic acid cycle | 1.56E-02 |
| 82 | GO:0016925: protein sumoylation | 1.59E-02 |
| 83 | GO:0006790: sulfur compound metabolic process | 1.59E-02 |
| 84 | GO:0006626: protein targeting to mitochondrion | 1.74E-02 |
| 85 | GO:0006108: malate metabolic process | 1.74E-02 |
| 86 | GO:0010102: lateral root morphogenesis | 1.74E-02 |
| 87 | GO:0006807: nitrogen compound metabolic process | 1.74E-02 |
| 88 | GO:0010628: positive regulation of gene expression | 1.74E-02 |
| 89 | GO:0006446: regulation of translational initiation | 1.90E-02 |
| 90 | GO:0048467: gynoecium development | 1.90E-02 |
| 91 | GO:0007034: vacuolar transport | 1.90E-02 |
| 92 | GO:0009617: response to bacterium | 1.95E-02 |
| 93 | GO:0009644: response to high light intensity | 2.09E-02 |
| 94 | GO:0006071: glycerol metabolic process | 2.23E-02 |
| 95 | GO:0006406: mRNA export from nucleus | 2.40E-02 |
| 96 | GO:0006289: nucleotide-excision repair | 2.40E-02 |
| 97 | GO:0006487: protein N-linked glycosylation | 2.40E-02 |
| 98 | GO:0009116: nucleoside metabolic process | 2.40E-02 |
| 99 | GO:0051302: regulation of cell division | 2.57E-02 |
| 100 | GO:0015992: proton transport | 2.75E-02 |
| 101 | GO:0051260: protein homooligomerization | 2.75E-02 |
| 102 | GO:0010431: seed maturation | 2.75E-02 |
| 103 | GO:0061077: chaperone-mediated protein folding | 2.75E-02 |
| 104 | GO:0007005: mitochondrion organization | 2.93E-02 |
| 105 | GO:0009626: plant-type hypersensitive response | 3.28E-02 |
| 106 | GO:0010089: xylem development | 3.31E-02 |
| 107 | GO:0019722: calcium-mediated signaling | 3.31E-02 |
| 108 | GO:0042147: retrograde transport, endosome to Golgi | 3.51E-02 |
| 109 | GO:0034220: ion transmembrane transport | 3.71E-02 |
| 110 | GO:0015991: ATP hydrolysis coupled proton transport | 3.71E-02 |
| 111 | GO:0042631: cellular response to water deprivation | 3.71E-02 |
| 112 | GO:0006623: protein targeting to vacuole | 4.33E-02 |
| 113 | GO:0006979: response to oxidative stress | 4.36E-02 |
| 114 | GO:0045454: cell redox homeostasis | 4.40E-02 |
| 115 | GO:0006635: fatty acid beta-oxidation | 4.54E-02 |
| 116 | GO:0080156: mitochondrial mRNA modification | 4.54E-02 |
| 117 | GO:0010193: response to ozone | 4.54E-02 |
| 118 | GO:0019761: glucosinolate biosynthetic process | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 2 | GO:0008752: FMN reductase activity | 0.00E+00 |
| 3 | GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor | 0.00E+00 |
| 4 | GO:0050152: omega-amidase activity | 0.00E+00 |
| 5 | GO:0004637: phosphoribosylamine-glycine ligase activity | 0.00E+00 |
| 6 | GO:0005212: structural constituent of eye lens | 0.00E+00 |
| 7 | GO:0052873: FMN reductase (NADPH) activity | 0.00E+00 |
| 8 | GO:0003735: structural constituent of ribosome | 1.04E-87 |
| 9 | GO:0003729: mRNA binding | 1.19E-18 |
| 10 | GO:0019843: rRNA binding | 5.37E-07 |
| 11 | GO:0004298: threonine-type endopeptidase activity | 6.73E-07 |
| 12 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 1.39E-05 |
| 13 | GO:0004129: cytochrome-c oxidase activity | 8.61E-05 |
| 14 | GO:0031177: phosphopantetheine binding | 2.48E-04 |
| 15 | GO:0000035: acyl binding | 3.33E-04 |
| 16 | GO:0003746: translation elongation factor activity | 3.81E-04 |
| 17 | GO:0005080: protein kinase C binding | 4.43E-04 |
| 18 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 4.43E-04 |
| 19 | GO:0035614: snRNA stem-loop binding | 4.43E-04 |
| 20 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 4.43E-04 |
| 21 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 4.43E-04 |
| 22 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 4.43E-04 |
| 23 | GO:0019786: Atg8-specific protease activity | 4.43E-04 |
| 24 | GO:0043022: ribosome binding | 5.37E-04 |
| 25 | GO:0015288: porin activity | 5.37E-04 |
| 26 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 5.37E-04 |
| 27 | GO:0008233: peptidase activity | 5.84E-04 |
| 28 | GO:0008308: voltage-gated anion channel activity | 6.55E-04 |
| 29 | GO:0030619: U1 snRNA binding | 9.56E-04 |
| 30 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 9.56E-04 |
| 31 | GO:0004596: peptide alpha-N-acetyltransferase activity | 9.56E-04 |
| 32 | GO:0047364: desulfoglucosinolate sulfotransferase activity | 9.56E-04 |
| 33 | GO:0032934: sterol binding | 9.56E-04 |
| 34 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 9.56E-04 |
| 35 | GO:0019779: Atg8 activating enzyme activity | 9.56E-04 |
| 36 | GO:0018708: thiol S-methyltransferase activity | 9.56E-04 |
| 37 | GO:0008430: selenium binding | 1.56E-03 |
| 38 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 1.56E-03 |
| 39 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 1.56E-03 |
| 40 | GO:0004550: nucleoside diphosphate kinase activity | 2.25E-03 |
| 41 | GO:0047627: adenylylsulfatase activity | 2.25E-03 |
| 42 | GO:0008097: 5S rRNA binding | 2.25E-03 |
| 43 | GO:0003999: adenine phosphoribosyltransferase activity | 2.25E-03 |
| 44 | GO:0004576: oligosaccharyl transferase activity | 3.03E-03 |
| 45 | GO:0019776: Atg8 ligase activity | 3.03E-03 |
| 46 | GO:0010011: auxin binding | 3.03E-03 |
| 47 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 3.03E-03 |
| 48 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 3.03E-03 |
| 49 | GO:0070628: proteasome binding | 3.03E-03 |
| 50 | GO:0031386: protein tag | 3.88E-03 |
| 51 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.88E-03 |
| 52 | GO:0004040: amidase activity | 3.88E-03 |
| 53 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.10E-03 |
| 54 | GO:0031593: polyubiquitin binding | 4.80E-03 |
| 55 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 4.80E-03 |
| 56 | GO:0004602: glutathione peroxidase activity | 5.79E-03 |
| 57 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 5.79E-03 |
| 58 | GO:0042162: telomeric DNA binding | 6.85E-03 |
| 59 | GO:0008237: metallopeptidase activity | 7.99E-03 |
| 60 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 1.04E-02 |
| 61 | GO:0001055: RNA polymerase II activity | 1.17E-02 |
| 62 | GO:0003723: RNA binding | 1.34E-02 |
| 63 | GO:0001054: RNA polymerase I activity | 1.45E-02 |
| 64 | GO:0044183: protein binding involved in protein folding | 1.45E-02 |
| 65 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.45E-02 |
| 66 | GO:0008515: sucrose transmembrane transporter activity | 1.45E-02 |
| 67 | GO:0003697: single-stranded DNA binding | 1.49E-02 |
| 68 | GO:0001056: RNA polymerase III activity | 1.59E-02 |
| 69 | GO:0003743: translation initiation factor activity | 1.90E-02 |
| 70 | GO:0008146: sulfotransferase activity | 2.06E-02 |
| 71 | GO:0003712: transcription cofactor activity | 2.06E-02 |
| 72 | GO:0051119: sugar transmembrane transporter activity | 2.06E-02 |
| 73 | GO:0051536: iron-sulfur cluster binding | 2.40E-02 |
| 74 | GO:0043130: ubiquitin binding | 2.40E-02 |
| 75 | GO:0005528: FK506 binding | 2.40E-02 |
| 76 | GO:0043424: protein histidine kinase binding | 2.57E-02 |
| 77 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.61E-02 |
| 78 | GO:0015035: protein disulfide oxidoreductase activity | 3.81E-02 |
| 79 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 3.91E-02 |
| 80 | GO:0008080: N-acetyltransferase activity | 3.91E-02 |
| 81 | GO:0010181: FMN binding | 4.12E-02 |
| 82 | GO:0004872: receptor activity | 4.33E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016469: proton-transporting two-sector ATPase complex | 0.00E+00 |
| 2 | GO:0043186: P granule | 0.00E+00 |
| 3 | GO:0031417: NatC complex | 0.00E+00 |
| 4 | GO:0005840: ribosome | 5.36E-66 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 6.47E-54 |
| 6 | GO:0022626: cytosolic ribosome | 3.29E-52 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 4.12E-43 |
| 8 | GO:0005737: cytoplasm | 1.10E-18 |
| 9 | GO:0005730: nucleolus | 5.72E-18 |
| 10 | GO:0005829: cytosol | 6.30E-17 |
| 11 | GO:0005774: vacuolar membrane | 5.70E-10 |
| 12 | GO:0009506: plasmodesma | 2.67E-09 |
| 13 | GO:0015935: small ribosomal subunit | 1.54E-08 |
| 14 | GO:0000502: proteasome complex | 5.24E-08 |
| 15 | GO:0015934: large ribosomal subunit | 9.47E-08 |
| 16 | GO:0005618: cell wall | 3.27E-07 |
| 17 | GO:0005773: vacuole | 6.00E-07 |
| 18 | GO:0005839: proteasome core complex | 6.73E-07 |
| 19 | GO:0016020: membrane | 1.49E-06 |
| 20 | GO:0005750: mitochondrial respiratory chain complex III | 6.48E-06 |
| 21 | GO:0005732: small nucleolar ribonucleoprotein complex | 4.73E-05 |
| 22 | GO:0030686: 90S preribosome | 4.43E-04 |
| 23 | GO:0046930: pore complex | 6.55E-04 |
| 24 | GO:0005685: U1 snRNP | 7.84E-04 |
| 25 | GO:0071011: precatalytic spliceosome | 9.23E-04 |
| 26 | GO:0035145: exon-exon junction complex | 9.56E-04 |
| 27 | GO:0005697: telomerase holoenzyme complex | 9.56E-04 |
| 28 | GO:0005740: mitochondrial envelope | 1.07E-03 |
| 29 | GO:0071013: catalytic step 2 spliceosome | 1.24E-03 |
| 30 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.41E-03 |
| 31 | GO:0034719: SMN-Sm protein complex | 1.56E-03 |
| 32 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.56E-03 |
| 33 | GO:0019013: viral nucleocapsid | 1.61E-03 |
| 34 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 2.03E-03 |
| 35 | GO:0005775: vacuolar lumen | 2.25E-03 |
| 36 | GO:1990726: Lsm1-7-Pat1 complex | 2.25E-03 |
| 37 | GO:0000419: DNA-directed RNA polymerase V complex | 2.27E-03 |
| 38 | GO:0045271: respiratory chain complex I | 2.78E-03 |
| 39 | GO:0070469: respiratory chain | 2.78E-03 |
| 40 | GO:0005776: autophagosome | 3.03E-03 |
| 41 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 3.03E-03 |
| 42 | GO:0005682: U5 snRNP | 3.03E-03 |
| 43 | GO:0005741: mitochondrial outer membrane | 3.05E-03 |
| 44 | GO:0005687: U4 snRNP | 3.88E-03 |
| 45 | GO:0097526: spliceosomal tri-snRNP complex | 3.88E-03 |
| 46 | GO:0005746: mitochondrial respiratory chain | 3.88E-03 |
| 47 | GO:0008250: oligosaccharyltransferase complex | 3.88E-03 |
| 48 | GO:0005622: intracellular | 4.32E-03 |
| 49 | GO:0005886: plasma membrane | 4.67E-03 |
| 50 | GO:0005771: multivesicular body | 4.80E-03 |
| 51 | GO:0030904: retromer complex | 4.80E-03 |
| 52 | GO:0009507: chloroplast | 5.28E-03 |
| 53 | GO:0005777: peroxisome | 5.37E-03 |
| 54 | GO:0005689: U12-type spliceosomal complex | 5.79E-03 |
| 55 | GO:0016272: prefoldin complex | 5.79E-03 |
| 56 | GO:0005681: spliceosomal complex | 6.11E-03 |
| 57 | GO:0071004: U2-type prespliceosome | 7.97E-03 |
| 58 | GO:0045273: respiratory chain complex II | 7.97E-03 |
| 59 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 7.97E-03 |
| 60 | GO:0005688: U6 snRNP | 7.97E-03 |
| 61 | GO:0000421: autophagosome membrane | 7.97E-03 |
| 62 | GO:0009536: plastid | 8.89E-03 |
| 63 | GO:0019773: proteasome core complex, alpha-subunit complex | 9.15E-03 |
| 64 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 9.15E-03 |
| 65 | GO:0005788: endoplasmic reticulum lumen | 9.51E-03 |
| 66 | GO:0005736: DNA-directed RNA polymerase I complex | 1.04E-02 |
| 67 | GO:0005666: DNA-directed RNA polymerase III complex | 1.17E-02 |
| 68 | GO:0005686: U2 snRNP | 1.30E-02 |
| 69 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.30E-02 |
| 70 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.45E-02 |
| 71 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.45E-02 |
| 72 | GO:0005739: mitochondrion | 1.49E-02 |
| 73 | GO:0009508: plastid chromosome | 1.74E-02 |
| 74 | GO:0005758: mitochondrial intermembrane space | 2.40E-02 |
| 75 | GO:0031966: mitochondrial membrane | 2.43E-02 |
| 76 | GO:0031410: cytoplasmic vesicle | 2.93E-02 |
| 77 | GO:0015629: actin cytoskeleton | 3.12E-02 |
| 78 | GO:0005747: mitochondrial respiratory chain complex I | 3.18E-02 |
| 79 | GO:0005783: endoplasmic reticulum | 4.04E-02 |