co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G65390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071289: cellular response to nickel ion	0.00E+00
2	GO:1903086: negative regulation of sinapate ester biosynthetic process	0.00E+00
3	GO:0006862: nucleotide transport	0.00E+00
4	GO:0032497: detection of lipopolysaccharide	0.00E+00
5	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
6	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
7	GO:0010200: response to chitin	9.11E-15
8	GO:0006955: immune response	2.65E-06
9	GO:0006952: defense response	2.87E-06
10	GO:0042344: indole glucosinolate catabolic process	8.95E-06
11	GO:0052544: defense response by callose deposition in cell wall	1.90E-05
12	GO:0015700: arsenite transport	2.04E-05
13	GO:0002679: respiratory burst involved in defense response	2.04E-05
14	GO:0006468: protein phosphorylation	6.96E-05
15	GO:0010337: regulation of salicylic acid metabolic process	8.74E-05
16	GO:0048544: recognition of pollen	1.92E-04
17	GO:0090421: embryonic meristem initiation	2.29E-04
18	GO:0046938: phytochelatin biosynthetic process	2.29E-04
19	GO:0051180: vitamin transport	2.29E-04
20	GO:0030974: thiamine pyrophosphate transport	2.29E-04
21	GO:0009865: pollen tube adhesion	2.29E-04
22	GO:0050691: regulation of defense response to virus by host	2.29E-04
23	GO:0046685: response to arsenic-containing substance	3.04E-04
24	GO:0051865: protein autoubiquitination	3.04E-04
25	GO:0009873: ethylene-activated signaling pathway	3.07E-04
26	GO:0031407: oxylipin metabolic process	5.10E-04
27	GO:0010289: homogalacturonan biosynthetic process	5.10E-04
28	GO:0006898: receptor-mediated endocytosis	5.10E-04
29	GO:0015893: drug transport	5.10E-04
30	GO:0052542: defense response by callose deposition	5.10E-04
31	GO:0010507: negative regulation of autophagy	5.10E-04
32	GO:0009611: response to wounding	6.19E-04
33	GO:0006598: polyamine catabolic process	8.29E-04
34	GO:0080168: abscisic acid transport	8.29E-04
35	GO:0016045: detection of bacterium	8.29E-04
36	GO:0010359: regulation of anion channel activity	8.29E-04
37	GO:0090630: activation of GTPase activity	8.29E-04
38	GO:0007166: cell surface receptor signaling pathway	9.90E-04
39	GO:0009695: jasmonic acid biosynthetic process	1.08E-03
40	GO:0009737: response to abscisic acid	1.14E-03
41	GO:0098542: defense response to other organism	1.18E-03
42	GO:0043207: response to external biotic stimulus	1.18E-03
43	GO:0080170: hydrogen peroxide transmembrane transport	1.18E-03
44	GO:0030100: regulation of endocytosis	1.18E-03
45	GO:0033014: tetrapyrrole biosynthetic process	1.18E-03
46	GO:0031408: oxylipin biosynthetic process	1.18E-03
47	GO:0015696: ammonium transport	1.18E-03
48	GO:0072488: ammonium transmembrane transport	1.57E-03
49	GO:0034440: lipid oxidation	1.57E-03
50	GO:1902347: response to strigolactone	1.57E-03
51	GO:0009164: nucleoside catabolic process	2.01E-03
52	GO:0045487: gibberellin catabolic process	2.01E-03
53	GO:2000762: regulation of phenylpropanoid metabolic process	2.01E-03
54	GO:0006873: cellular ion homeostasis	2.01E-03
55	GO:0048497: maintenance of floral organ identity	2.01E-03
56	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.28E-03
57	GO:0042742: defense response to bacterium	2.39E-03
58	GO:0006751: glutathione catabolic process	2.48E-03
59	GO:0019760: glucosinolate metabolic process	2.86E-03
60	GO:0045892: negative regulation of transcription, DNA-templated	2.92E-03
61	GO:0080086: stamen filament development	2.97E-03
62	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.97E-03
63	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.50E-03
64	GO:0010161: red light signaling pathway	3.50E-03
65	GO:0009751: response to salicylic acid	3.84E-03
66	GO:0007155: cell adhesion	4.06E-03
67	GO:1900150: regulation of defense response to fungus	4.06E-03
68	GO:2000070: regulation of response to water deprivation	4.06E-03
69	GO:0045010: actin nucleation	4.06E-03
70	GO:0008219: cell death	4.44E-03
71	GO:0009932: cell tip growth	4.65E-03
72	GO:0009880: embryonic pattern specification	4.65E-03
73	GO:0001708: cell fate specification	5.27E-03
74	GO:0098656: anion transmembrane transport	5.27E-03
75	GO:0006783: heme biosynthetic process	5.27E-03
76	GO:0045087: innate immune response	5.62E-03
77	GO:0006351: transcription, DNA-templated	5.72E-03
78	GO:0006779: porphyrin-containing compound biosynthetic process	5.91E-03
79	GO:2000280: regulation of root development	5.91E-03
80	GO:0006839: mitochondrial transport	6.41E-03
81	GO:0006782: protoporphyrinogen IX biosynthetic process	6.58E-03
82	GO:0019538: protein metabolic process	6.58E-03
83	GO:0010015: root morphogenesis	7.28E-03
84	GO:0009682: induced systemic resistance	7.28E-03
85	GO:0010105: negative regulation of ethylene-activated signaling pathway	8.00E-03
86	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	8.00E-03
87	GO:0006355: regulation of transcription, DNA-templated	8.29E-03
88	GO:0006855: drug transmembrane transport	8.46E-03
89	GO:0055046: microgametogenesis	8.75E-03
90	GO:0002237: response to molecule of bacterial origin	9.52E-03
91	GO:0010224: response to UV-B	1.01E-02
92	GO:0009901: anther dehiscence	1.03E-02
93	GO:0071732: cellular response to nitric oxide	1.03E-02
94	GO:0070588: calcium ion transmembrane transport	1.03E-02
95	GO:0009863: salicylic acid mediated signaling pathway	1.20E-02
96	GO:0009626: plant-type hypersensitive response	1.23E-02
97	GO:0009620: response to fungus	1.27E-02
98	GO:0007017: microtubule-based process	1.28E-02
99	GO:0009624: response to nematode	1.40E-02
100	GO:0030245: cellulose catabolic process	1.46E-02
101	GO:0030433: ubiquitin-dependent ERAD pathway	1.46E-02
102	GO:0009686: gibberellin biosynthetic process	1.56E-02
103	GO:0071369: cellular response to ethylene stimulus	1.56E-02
104	GO:0040007: growth	1.56E-02
105	GO:0010089: xylem development	1.65E-02
106	GO:0010091: trichome branching	1.65E-02
107	GO:0042147: retrograde transport, endosome to Golgi	1.75E-02
108	GO:0046686: response to cadmium ion	1.77E-02
109	GO:0009753: response to jasmonic acid	1.85E-02
110	GO:0048653: anther development	1.85E-02
111	GO:0048868: pollen tube development	1.95E-02
112	GO:0016567: protein ubiquitination	2.08E-02
113	GO:0009749: response to glucose	2.16E-02
114	GO:0002229: defense response to oomycetes	2.27E-02
115	GO:0010193: response to ozone	2.27E-02
116	GO:0006891: intra-Golgi vesicle-mediated transport	2.27E-02
117	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.41E-02
118	GO:0010150: leaf senescence	2.42E-02
119	GO:1901657: glycosyl compound metabolic process	2.48E-02
120	GO:0071281: cellular response to iron ion	2.48E-02
121	GO:0009414: response to water deprivation	2.60E-02
122	GO:0009639: response to red or far red light	2.60E-02
123	GO:0006470: protein dephosphorylation	2.77E-02
124	GO:0010468: regulation of gene expression	2.89E-02
125	GO:0009617: response to bacterium	2.89E-02
126	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.06E-02
127	GO:0015995: chlorophyll biosynthetic process	3.31E-02
128	GO:0009555: pollen development	3.48E-02
129	GO:0009817: defense response to fungus, incompatible interaction	3.56E-02
130	GO:0006811: ion transport	3.81E-02
131	GO:0006970: response to osmotic stress	4.02E-02
132	GO:0006865: amino acid transport	4.08E-02
133	GO:0009723: response to ethylene	4.32E-02
134	GO:0006810: transport	4.70E-02
135	GO:0006897: endocytosis	4.76E-02
136	GO:0006631: fatty acid metabolic process	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
2	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
3	GO:0017048: Rho GTPase binding	0.00E+00
4	GO:0005522: profilin binding	0.00E+00
5	GO:0043565: sequence-specific DNA binding	9.21E-06
6	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	2.04E-05
7	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.07E-04
8	GO:0052894: norspermine:oxygen oxidoreductase activity	2.29E-04
9	GO:0090422: thiamine pyrophosphate transporter activity	2.29E-04
10	GO:0046870: cadmium ion binding	2.29E-04
11	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	2.29E-04
12	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	2.29E-04
13	GO:0090440: abscisic acid transporter activity	2.29E-04
14	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.29E-04
15	GO:0071992: phytochelatin transmembrane transporter activity	2.29E-04
16	GO:0016301: kinase activity	2.33E-04
17	GO:0004713: protein tyrosine kinase activity	4.23E-04
18	GO:0015105: arsenite transmembrane transporter activity	5.10E-04
19	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	5.10E-04
20	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	5.10E-04
21	GO:0016629: 12-oxophytodienoate reductase activity	5.10E-04
22	GO:0004103: choline kinase activity	5.10E-04
23	GO:0008883: glutamyl-tRNA reductase activity	5.10E-04
24	GO:0046592: polyamine oxidase activity	8.29E-04
25	GO:0003840: gamma-glutamyltransferase activity	8.29E-04
26	GO:0036374: glutathione hydrolase activity	8.29E-04
27	GO:0046423: allene-oxide cyclase activity	8.29E-04
28	GO:0004383: guanylate cyclase activity	8.29E-04
29	GO:0016165: linoleate 13S-lipoxygenase activity	8.29E-04
30	GO:0004674: protein serine/threonine kinase activity	1.17E-03
31	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.18E-03
32	GO:0001653: peptide receptor activity	1.18E-03
33	GO:0018685: alkane 1-monooxygenase activity	2.01E-03
34	GO:0047631: ADP-ribose diphosphatase activity	2.01E-03
35	GO:0044212: transcription regulatory region DNA binding	2.39E-03
36	GO:0008519: ammonium transmembrane transporter activity	2.48E-03
37	GO:0035673: oligopeptide transmembrane transporter activity	2.48E-03
38	GO:0000210: NAD+ diphosphatase activity	2.48E-03
39	GO:0019137: thioglucosidase activity	2.48E-03
40	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.65E-03
41	GO:0051020: GTPase binding	2.97E-03
42	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.97E-03
43	GO:0008143: poly(A) binding	3.50E-03
44	GO:0102483: scopolin beta-glucosidase activity	4.01E-03
45	GO:0030246: carbohydrate binding	4.02E-03
46	GO:0008308: voltage-gated anion channel activity	4.65E-03
47	GO:0015238: drug transmembrane transporter activity	4.66E-03
48	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	5.13E-03
49	GO:0003678: DNA helicase activity	5.27E-03
50	GO:0008422: beta-glucosidase activity	6.14E-03
51	GO:0005524: ATP binding	7.94E-03
52	GO:0015198: oligopeptide transporter activity	8.00E-03
53	GO:0005262: calcium channel activity	8.75E-03
54	GO:0005315: inorganic phosphate transmembrane transporter activity	8.75E-03
55	GO:0008131: primary amine oxidase activity	9.52E-03
56	GO:0031625: ubiquitin protein ligase binding	1.08E-02
57	GO:0051087: chaperone binding	1.28E-02
58	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.30E-02
59	GO:0003779: actin binding	1.35E-02
60	GO:0004707: MAP kinase activity	1.37E-02
61	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.49E-02
62	GO:0004672: protein kinase activity	1.60E-02
63	GO:0008514: organic anion transmembrane transporter activity	1.65E-02
64	GO:0005516: calmodulin binding	1.74E-02
65	GO:0009055: electron carrier activity	1.85E-02
66	GO:0010181: FMN binding	2.05E-02
67	GO:0015297: antiporter activity	2.31E-02
68	GO:0051015: actin filament binding	2.48E-02
69	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.71E-02
70	GO:0005200: structural constituent of cytoskeleton	2.71E-02
71	GO:0015250: water channel activity	2.94E-02
72	GO:0005215: transporter activity	3.12E-02
73	GO:0004721: phosphoprotein phosphatase activity	3.31E-02
74	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.43E-02
75	GO:0005096: GTPase activator activity	3.68E-02
76	GO:0050660: flavin adenine dinucleotide binding	4.32E-02
77	GO:0050661: NADP binding	4.62E-02
78	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.79E-04
2	GO:0005911: cell-cell junction	2.29E-04
3	GO:0070382: exocytic vesicle	2.29E-04
4	GO:0045177: apical part of cell	1.18E-03
5	GO:0016021: integral component of membrane	4.08E-03
6	GO:0010494: cytoplasmic stress granule	5.27E-03
7	GO:0045298: tubulin complex	5.27E-03
8	GO:0016604: nuclear body	5.91E-03
9	GO:0031902: late endosome membrane	6.68E-03
10	GO:0090404: pollen tube tip	7.28E-03
11	GO:0005938: cell cortex	8.75E-03
12	GO:0010008: endosome membrane	1.20E-02
13	GO:0005743: mitochondrial inner membrane	1.55E-02
14	GO:0005770: late endosome	1.95E-02
15	GO:0005768: endosome	2.31E-02
16	GO:0046658: anchored component of plasma membrane	3.20E-02
17	GO:0009506: plasmodesma	3.58E-02
18	GO:0009536: plastid	3.63E-02