co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G65320

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
2	GO:0046460: neutral lipid biosynthetic process	0.00E+00
3	GO:0009092: homoserine metabolic process	0.00E+00
4	GO:0006044: N-acetylglucosamine metabolic process	0.00E+00
5	GO:0045740: positive regulation of DNA replication	0.00E+00
6	GO:0015822: ornithine transport	0.00E+00
7	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
8	GO:0033206: meiotic cytokinesis	6.42E-05
9	GO:0000066: mitochondrial ornithine transport	6.42E-05
10	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	1.55E-04
11	GO:0044419: interspecies interaction between organisms	1.55E-04
12	GO:0032259: methylation	2.50E-04
13	GO:0009653: anatomical structure morphogenesis	2.63E-04
14	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	2.63E-04
15	GO:0046417: chorismate metabolic process	2.63E-04
16	GO:0071492: cellular response to UV-A	2.63E-04
17	GO:0010476: gibberellin mediated signaling pathway	2.63E-04
18	GO:0010325: raffinose family oligosaccharide biosynthetic process	2.63E-04
19	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	2.63E-04
20	GO:0080022: primary root development	3.32E-04
21	GO:0044205: 'de novo' UMP biosynthetic process	5.10E-04
22	GO:0006808: regulation of nitrogen utilization	5.10E-04
23	GO:0071486: cellular response to high light intensity	5.10E-04
24	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	5.10E-04
25	GO:0009765: photosynthesis, light harvesting	5.10E-04
26	GO:0071249: cellular response to nitrate	5.10E-04
27	GO:0006221: pyrimidine nucleotide biosynthetic process	5.10E-04
28	GO:0008295: spermidine biosynthetic process	5.10E-04
29	GO:0009117: nucleotide metabolic process	7.90E-04
30	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	7.90E-04
31	GO:0048527: lateral root development	9.34E-04
32	GO:0009088: threonine biosynthetic process	9.40E-04
33	GO:0048444: floral organ morphogenesis	9.40E-04
34	GO:0010555: response to mannitol	9.40E-04
35	GO:2000067: regulation of root morphogenesis	9.40E-04
36	GO:0034389: lipid particle organization	9.40E-04
37	GO:2000033: regulation of seed dormancy process	9.40E-04
38	GO:0007050: cell cycle arrest	1.10E-03
39	GO:0006826: iron ion transport	1.10E-03
40	GO:0000082: G1/S transition of mitotic cell cycle	1.10E-03
41	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.10E-03
42	GO:0006839: mitochondrial transport	1.15E-03
43	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	1.26E-03
44	GO:0006526: arginine biosynthetic process	1.44E-03
45	GO:0007186: G-protein coupled receptor signaling pathway	1.44E-03
46	GO:0010233: phloem transport	1.44E-03
47	GO:0009056: catabolic process	1.62E-03
48	GO:0019432: triglyceride biosynthetic process	1.62E-03
49	GO:0048507: meristem development	1.62E-03
50	GO:0009086: methionine biosynthetic process	1.81E-03
51	GO:0045036: protein targeting to chloroplast	2.01E-03
52	GO:0072593: reactive oxygen species metabolic process	2.21E-03
53	GO:0009073: aromatic amino acid family biosynthetic process	2.21E-03
54	GO:0009750: response to fructose	2.21E-03
55	GO:0006378: mRNA polyadenylation	2.21E-03
56	GO:0010152: pollen maturation	2.42E-03
57	GO:0050826: response to freezing	2.64E-03
58	GO:0010102: lateral root morphogenesis	2.64E-03
59	GO:0010020: chloroplast fission	2.87E-03
60	GO:0010039: response to iron ion	3.09E-03
61	GO:0080188: RNA-directed DNA methylation	3.09E-03
62	GO:0006863: purine nucleobase transport	3.33E-03
63	GO:0006071: glycerol metabolic process	3.33E-03
64	GO:0034976: response to endoplasmic reticulum stress	3.33E-03
65	GO:0006289: nucleotide-excision repair	3.57E-03
66	GO:2000377: regulation of reactive oxygen species metabolic process	3.57E-03
67	GO:0009863: salicylic acid mediated signaling pathway	3.57E-03
68	GO:0010187: negative regulation of seed germination	3.57E-03
69	GO:0006306: DNA methylation	4.08E-03
70	GO:0016226: iron-sulfur cluster assembly	4.34E-03
71	GO:0080092: regulation of pollen tube growth	4.34E-03
72	GO:0006012: galactose metabolic process	4.60E-03
73	GO:0009739: response to gibberellin	4.69E-03
74	GO:0048443: stamen development	4.87E-03
75	GO:0009749: response to glucose	6.31E-03
76	GO:0031047: gene silencing by RNA	6.92E-03
77	GO:1901657: glycosyl compound metabolic process	7.24E-03
78	GO:0016126: sterol biosynthetic process	8.54E-03
79	GO:0010029: regulation of seed germination	8.88E-03
80	GO:0006974: cellular response to DNA damage stimulus	9.22E-03
81	GO:0045454: cell redox homeostasis	9.62E-03
82	GO:0010311: lateral root formation	1.07E-02
83	GO:0010218: response to far red light	1.10E-02
84	GO:0009867: jasmonic acid mediated signaling pathway	1.22E-02
85	GO:0008152: metabolic process	1.31E-02
86	GO:0009926: auxin polar transport	1.45E-02
87	GO:0009744: response to sucrose	1.45E-02
88	GO:0006810: transport	1.51E-02
89	GO:0042538: hyperosmotic salinity response	1.71E-02
90	GO:0051603: proteolysis involved in cellular protein catabolic process	1.84E-02
91	GO:0009909: regulation of flower development	1.93E-02
92	GO:0048367: shoot system development	2.07E-02
93	GO:0009620: response to fungus	2.16E-02
94	GO:0009740: gibberellic acid mediated signaling pathway	2.21E-02
95	GO:0051726: regulation of cell cycle	2.41E-02
96	GO:0009742: brassinosteroid mediated signaling pathway	2.41E-02
97	GO:0009737: response to abscisic acid	2.41E-02
98	GO:0040008: regulation of growth	3.30E-02
99	GO:0009617: response to bacterium	3.86E-02

Rank	GO Term	Adjusted P value
1	GO:0003992: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity	0.00E+00
2	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
3	GO:0004343: glucosamine 6-phosphate N-acetyltransferase activity	0.00E+00
4	GO:0004151: dihydroorotase activity	0.00E+00
5	GO:0004413: homoserine kinase activity	6.42E-05
6	GO:0046480: galactolipid galactosyltransferase activity	6.42E-05
7	GO:0080079: cellobiose glucosidase activity	6.42E-05
8	GO:0008168: methyltransferase activity	8.88E-05
9	GO:1990585: hydroxyproline O-arabinosyltransferase activity	1.55E-04
10	GO:0004106: chorismate mutase activity	1.55E-04
11	GO:0010331: gibberellin binding	1.55E-04
12	GO:0004766: spermidine synthase activity	1.55E-04
13	GO:0000064: L-ornithine transmembrane transporter activity	1.55E-04
14	GO:0001664: G-protein coupled receptor binding	2.63E-04
15	GO:0010277: chlorophyllide a oxygenase [overall] activity	2.63E-04
16	GO:0031683: G-protein beta/gamma-subunit complex binding	2.63E-04
17	GO:0008080: N-acetyltransferase activity	3.58E-04
18	GO:0035529: NADH pyrophosphatase activity	3.82E-04
19	GO:0000254: C-4 methylsterol oxidase activity	3.82E-04
20	GO:0005319: lipid transporter activity	5.10E-04
21	GO:0010011: auxin binding	5.10E-04
22	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	7.90E-04
23	GO:0004144: diacylglycerol O-acyltransferase activity	9.40E-04
24	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.10E-03
25	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.10E-03
26	GO:0047893: flavonol 3-O-glucosyltransferase activity	1.26E-03
27	GO:0004034: aldose 1-epimerase activity	1.26E-03
28	GO:0051537: 2 iron, 2 sulfur cluster binding	1.40E-03
29	GO:0000989: transcription factor activity, transcription factor binding	1.62E-03
30	GO:0008234: cysteine-type peptidase activity	1.92E-03
31	GO:0008047: enzyme activator activity	2.01E-03
32	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.21E-03
33	GO:0004860: protein kinase inhibitor activity	2.21E-03
34	GO:0022857: transmembrane transporter activity	2.31E-03
35	GO:0008378: galactosyltransferase activity	2.42E-03
36	GO:0016757: transferase activity, transferring glycosyl groups	3.17E-03
37	GO:0005345: purine nucleobase transmembrane transporter activity	3.82E-03
38	GO:0033612: receptor serine/threonine kinase binding	4.08E-03
39	GO:0035251: UDP-glucosyltransferase activity	4.08E-03
40	GO:0003756: protein disulfide isomerase activity	4.87E-03
41	GO:0004197: cysteine-type endopeptidase activity	6.92E-03
42	GO:0016168: chlorophyll binding	8.88E-03
43	GO:0008375: acetylglucosaminyltransferase activity	9.22E-03
44	GO:0003746: translation elongation factor activity	1.22E-02
45	GO:0008422: beta-glucosidase activity	1.29E-02
46	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.80E-02
47	GO:0005515: protein binding	1.81E-02
48	GO:0045735: nutrient reservoir activity	2.02E-02
49	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.16E-02
50	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.16E-02
51	GO:0015035: protein disulfide oxidoreductase activity	2.36E-02
52	GO:0008026: ATP-dependent helicase activity	2.41E-02
53	GO:0016787: hydrolase activity	2.43E-02
54	GO:0030246: carbohydrate binding	2.85E-02
55	GO:0030170: pyridoxal phosphate binding	2.92E-02
56	GO:0005507: copper ion binding	3.01E-02
57	GO:0008194: UDP-glycosyltransferase activity	3.69E-02
58	GO:0042802: identical protein binding	4.04E-02
59	GO:0046982: protein heterodimerization activity	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0005675: holo TFIIH complex	0.00E+00
2	GO:0009706: chloroplast inner membrane	1.42E-05
3	GO:0043190: ATP-binding cassette (ABC) transporter complex	6.42E-05
4	GO:0000439: core TFIIH complex	2.63E-04
5	GO:0000323: lytic vacuole	3.82E-04
6	GO:0005849: mRNA cleavage factor complex	3.82E-04
7	GO:0009707: chloroplast outer membrane	8.14E-04
8	GO:0005801: cis-Golgi network	9.40E-04
9	GO:0031359: integral component of chloroplast outer membrane	1.10E-03
10	GO:0005811: lipid particle	1.44E-03
11	GO:0005764: lysosome	2.87E-03
12	GO:0000419: DNA-directed RNA polymerase V complex	3.33E-03
13	GO:0009507: chloroplast	4.33E-03
14	GO:0009941: chloroplast envelope	5.59E-03
15	GO:0009523: photosystem II	6.31E-03
16	GO:0005802: trans-Golgi network	6.88E-03
17	GO:0005768: endosome	8.11E-03
18	GO:0005743: mitochondrial inner membrane	1.10E-02
19	GO:0009536: plastid	1.20E-02
20	GO:0005789: endoplasmic reticulum membrane	1.59E-02
21	GO:0016021: integral component of membrane	1.69E-02
22	GO:0005794: Golgi apparatus	2.06E-02
23	GO:0005834: heterotrimeric G-protein complex	2.12E-02
24	GO:0005654: nucleoplasm	2.66E-02
25	GO:0005783: endoplasmic reticulum	3.51E-02
26	GO:0005615: extracellular space	3.69E-02