co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G65295

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090279: regulation of calcium ion import	0.00E+00
2	GO:0071474: cellular hyperosmotic response	0.00E+00
3	GO:0005996: monosaccharide metabolic process	0.00E+00
4	GO:0009773: photosynthetic electron transport in photosystem I	6.64E-09
5	GO:0080093: regulation of photorespiration	7.41E-06
6	GO:0031998: regulation of fatty acid beta-oxidation	7.41E-06
7	GO:0030388: fructose 1,6-bisphosphate metabolic process	2.00E-05
8	GO:0051262: protein tetramerization	2.00E-05
9	GO:0015979: photosynthesis	3.21E-05
10	GO:0006000: fructose metabolic process	3.67E-05
11	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	5.65E-05
12	GO:0042823: pyridoxal phosphate biosynthetic process	5.65E-05
13	GO:0006109: regulation of carbohydrate metabolic process	7.90E-05
14	GO:0045727: positive regulation of translation	7.90E-05
15	GO:0009735: response to cytokinin	9.89E-05
16	GO:0006097: glyoxylate cycle	1.04E-04
17	GO:0009642: response to light intensity	2.20E-04
18	GO:0032544: plastid translation	2.52E-04
19	GO:0006002: fructose 6-phosphate metabolic process	2.52E-04
20	GO:0019684: photosynthesis, light reaction	3.90E-04
21	GO:0043085: positive regulation of catalytic activity	3.90E-04
22	GO:0000272: polysaccharide catabolic process	3.90E-04
23	GO:0018119: peptidyl-cysteine S-nitrosylation	3.90E-04
24	GO:0009409: response to cold	4.40E-04
25	GO:0006108: malate metabolic process	4.64E-04
26	GO:0006094: gluconeogenesis	4.64E-04
27	GO:0005986: sucrose biosynthetic process	4.64E-04
28	GO:0019253: reductive pentose-phosphate cycle	5.02E-04
29	GO:0005985: sucrose metabolic process	5.40E-04
30	GO:0009768: photosynthesis, light harvesting in photosystem I	6.61E-04
31	GO:0042631: cellular response to water deprivation	9.19E-04
32	GO:0006662: glycerol ether metabolic process	9.64E-04
33	GO:0018298: protein-chromophore linkage	1.67E-03
34	GO:0010218: response to far red light	1.78E-03
35	GO:0009637: response to blue light	1.95E-03
36	GO:0034599: cellular response to oxidative stress	2.01E-03
37	GO:0006099: tricarboxylic acid cycle	2.01E-03
38	GO:0010114: response to red light	2.31E-03
39	GO:0006412: translation	2.35E-03
40	GO:0006364: rRNA processing	2.82E-03
41	GO:0042742: defense response to bacterium	2.90E-03
42	GO:0043086: negative regulation of catalytic activity	3.16E-03
43	GO:0006810: transport	4.24E-03
44	GO:0005975: carbohydrate metabolic process	4.38E-03
45	GO:0007623: circadian rhythm	5.21E-03
46	GO:0010468: regulation of gene expression	5.88E-03
47	GO:0009658: chloroplast organization	7.04E-03
48	GO:0042254: ribosome biogenesis	7.13E-03
49	GO:0006970: response to osmotic stress	7.41E-03
50	GO:0009723: response to ethylene	7.79E-03
51	GO:0045454: cell redox homeostasis	9.27E-03
52	GO:0009611: response to wounding	1.64E-02
53	GO:0045893: positive regulation of transcription, DNA-templated	1.78E-02

Rank	GO Term	Adjusted P value
1	GO:0019843: rRNA binding	5.15E-06
2	GO:0005227: calcium activated cation channel activity	7.41E-06
3	GO:0010297: heteropolysaccharide binding	2.00E-05
4	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	2.00E-05
5	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	7.90E-05
6	GO:0016615: malate dehydrogenase activity	1.30E-04
7	GO:0030060: L-malate dehydrogenase activity	1.59E-04
8	GO:0005261: cation channel activity	1.59E-04
9	GO:0008047: enzyme activator activity	3.54E-04
10	GO:0004565: beta-galactosidase activity	4.64E-04
11	GO:0008266: poly(U) RNA binding	5.02E-04
12	GO:0031409: pigment binding	5.80E-04
13	GO:0004857: enzyme inhibitor activity	6.20E-04
14	GO:0003735: structural constituent of ribosome	7.13E-04
15	GO:0047134: protein-disulfide reductase activity	8.75E-04
16	GO:0050662: coenzyme binding	1.01E-03
17	GO:0004791: thioredoxin-disulfide reductase activity	1.01E-03
18	GO:0048038: quinone binding	1.10E-03
19	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.20E-03
20	GO:0016168: chlorophyll binding	1.45E-03
21	GO:0003824: catalytic activity	3.18E-03
22	GO:0015035: protein disulfide oxidoreductase activity	3.66E-03
23	GO:0003723: RNA binding	2.26E-02
24	GO:0005509: calcium ion binding	2.52E-02
25	GO:0016491: oxidoreductase activity	3.25E-02

Rank	GO Term	Adjusted P value
1	GO:0042579: microbody	0.00E+00
2	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
3	GO:0009941: chloroplast envelope	3.13E-11
4	GO:0009507: chloroplast	4.38E-11
5	GO:0009534: chloroplast thylakoid	2.21E-09
6	GO:0009570: chloroplast stroma	5.18E-09
7	GO:0048046: apoplast	6.24E-07
8	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.51E-06
9	GO:0009535: chloroplast thylakoid membrane	4.34E-06
10	GO:0010287: plastoglobule	4.69E-06
11	GO:0000427: plastid-encoded plastid RNA polymerase complex	2.00E-05
12	GO:0010319: stromule	3.12E-05
13	GO:0009538: photosystem I reaction center	2.20E-04
14	GO:0005840: ribosome	3.17E-04
15	GO:0030095: chloroplast photosystem II	5.02E-04
16	GO:0030076: light-harvesting complex	5.40E-04
17	GO:0042651: thylakoid membrane	6.61E-04
18	GO:0009654: photosystem II oxygen evolving complex	6.61E-04
19	GO:0015935: small ribosomal subunit	7.02E-04
20	GO:0009522: photosystem I	1.01E-03
21	GO:0019898: extrinsic component of membrane	1.06E-03
22	GO:0005777: peroxisome	1.66E-03
23	GO:0009579: thylakoid	1.73E-03
24	GO:0031977: thylakoid lumen	2.19E-03
25	GO:0005773: vacuole	2.41E-03
26	GO:0009543: chloroplast thylakoid lumen	4.18E-03
27	GO:0005623: cell	4.26E-03
28	GO:0016020: membrane	1.17E-02
29	GO:0009505: plant-type cell wall	3.13E-02