GO Enrichment Analysis of Co-expressed Genes with
AT1G64720
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 2 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 3 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 4 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 5 | GO:0010114: response to red light | 2.29E-09 |
| 6 | GO:0015979: photosynthesis | 1.21E-08 |
| 7 | GO:0015995: chlorophyll biosynthetic process | 5.47E-08 |
| 8 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.51E-07 |
| 9 | GO:0009645: response to low light intensity stimulus | 4.42E-06 |
| 10 | GO:0009769: photosynthesis, light harvesting in photosystem II | 4.42E-06 |
| 11 | GO:0009642: response to light intensity | 5.95E-06 |
| 12 | GO:0018298: protein-chromophore linkage | 5.99E-06 |
| 13 | GO:0010218: response to far red light | 7.10E-06 |
| 14 | GO:0009637: response to blue light | 8.99E-06 |
| 15 | GO:0009644: response to high light intensity | 1.57E-05 |
| 16 | GO:0051775: response to redox state | 2.41E-05 |
| 17 | GO:0071277: cellular response to calcium ion | 2.41E-05 |
| 18 | GO:0010028: xanthophyll cycle | 2.41E-05 |
| 19 | GO:0019253: reductive pentose-phosphate cycle | 2.92E-05 |
| 20 | GO:0009269: response to desiccation | 5.45E-05 |
| 21 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 6.16E-05 |
| 22 | GO:0042853: L-alanine catabolic process | 6.16E-05 |
| 23 | GO:0042548: regulation of photosynthesis, light reaction | 6.16E-05 |
| 24 | GO:0006000: fructose metabolic process | 1.09E-04 |
| 25 | GO:0006107: oxaloacetate metabolic process | 1.62E-04 |
| 26 | GO:0006021: inositol biosynthetic process | 2.21E-04 |
| 27 | GO:0006734: NADH metabolic process | 2.21E-04 |
| 28 | GO:0006545: glycine biosynthetic process | 2.21E-04 |
| 29 | GO:0009765: photosynthesis, light harvesting | 2.21E-04 |
| 30 | GO:0042742: defense response to bacterium | 2.71E-04 |
| 31 | GO:0043097: pyrimidine nucleoside salvage | 2.84E-04 |
| 32 | GO:0016123: xanthophyll biosynthetic process | 2.84E-04 |
| 33 | GO:0009853: photorespiration | 3.05E-04 |
| 34 | GO:0034599: cellular response to oxidative stress | 3.19E-04 |
| 35 | GO:0009643: photosynthetic acclimation | 3.51E-04 |
| 36 | GO:0050665: hydrogen peroxide biosynthetic process | 3.51E-04 |
| 37 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 3.51E-04 |
| 38 | GO:0006206: pyrimidine nucleobase metabolic process | 3.51E-04 |
| 39 | GO:0010189: vitamin E biosynthetic process | 4.20E-04 |
| 40 | GO:0009854: oxidative photosynthetic carbon pathway | 4.20E-04 |
| 41 | GO:0071470: cellular response to osmotic stress | 4.20E-04 |
| 42 | GO:0009704: de-etiolation | 5.68E-04 |
| 43 | GO:0006002: fructose 6-phosphate metabolic process | 6.45E-04 |
| 44 | GO:0009657: plastid organization | 6.45E-04 |
| 45 | GO:0009735: response to cytokinin | 7.01E-04 |
| 46 | GO:0090333: regulation of stomatal closure | 7.25E-04 |
| 47 | GO:0098656: anion transmembrane transport | 7.25E-04 |
| 48 | GO:0009416: response to light stimulus | 7.83E-04 |
| 49 | GO:0009688: abscisic acid biosynthetic process | 8.92E-04 |
| 50 | GO:0043085: positive regulation of catalytic activity | 9.78E-04 |
| 51 | GO:0018119: peptidyl-cysteine S-nitrosylation | 9.78E-04 |
| 52 | GO:0006108: malate metabolic process | 1.16E-03 |
| 53 | GO:0006094: gluconeogenesis | 1.16E-03 |
| 54 | GO:0005986: sucrose biosynthetic process | 1.16E-03 |
| 55 | GO:0007623: circadian rhythm | 1.23E-03 |
| 56 | GO:0010207: photosystem II assembly | 1.25E-03 |
| 57 | GO:0055114: oxidation-reduction process | 1.36E-03 |
| 58 | GO:0009658: chloroplast organization | 1.88E-03 |
| 59 | GO:0006662: glycerol ether metabolic process | 2.45E-03 |
| 60 | GO:0010182: sugar mediated signaling pathway | 2.45E-03 |
| 61 | GO:0019252: starch biosynthetic process | 2.70E-03 |
| 62 | GO:0008654: phospholipid biosynthetic process | 2.70E-03 |
| 63 | GO:0009791: post-embryonic development | 2.70E-03 |
| 64 | GO:0009409: response to cold | 2.74E-03 |
| 65 | GO:0009408: response to heat | 3.41E-03 |
| 66 | GO:0051607: defense response to virus | 3.49E-03 |
| 67 | GO:0001666: response to hypoxia | 3.63E-03 |
| 68 | GO:0006811: ion transport | 4.64E-03 |
| 69 | GO:0007568: aging | 4.80E-03 |
| 70 | GO:0016051: carbohydrate biosynthetic process | 5.11E-03 |
| 71 | GO:0006099: tricarboxylic acid cycle | 5.26E-03 |
| 72 | GO:0042542: response to hydrogen peroxide | 5.91E-03 |
| 73 | GO:0006364: rRNA processing | 7.47E-03 |
| 74 | GO:0006417: regulation of translation | 8.02E-03 |
| 75 | GO:0009624: response to nematode | 9.56E-03 |
| 76 | GO:0006396: RNA processing | 9.75E-03 |
| 77 | GO:0009058: biosynthetic process | 1.16E-02 |
| 78 | GO:0009845: seed germination | 1.18E-02 |
| 79 | GO:0016036: cellular response to phosphate starvation | 1.34E-02 |
| 80 | GO:0006413: translational initiation | 1.34E-02 |
| 81 | GO:0005975: carbohydrate metabolic process | 1.86E-02 |
| 82 | GO:0042254: ribosome biogenesis | 1.94E-02 |
| 83 | GO:0006970: response to osmotic stress | 2.02E-02 |
| 84 | GO:0044550: secondary metabolite biosynthetic process | 2.37E-02 |
| 85 | GO:0045454: cell redox homeostasis | 2.54E-02 |
| 86 | GO:0009793: embryo development ending in seed dormancy | 2.83E-02 |
| 87 | GO:0032259: methylation | 2.86E-02 |
| 88 | GO:0006397: mRNA processing | 3.04E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 2 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 3 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 4 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 5 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 6 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 7 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 8 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 9 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 10 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 11 | GO:0031409: pigment binding | 3.09E-07 |
| 12 | GO:0008453: alanine-glyoxylate transaminase activity | 8.03E-07 |
| 13 | GO:0016168: chlorophyll binding | 4.16E-06 |
| 14 | GO:0008746: NAD(P)+ transhydrogenase activity | 2.41E-05 |
| 15 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 2.41E-05 |
| 16 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 2.41E-05 |
| 17 | GO:0047958: glycine:2-oxoglutarate aminotransferase activity | 2.41E-05 |
| 18 | GO:0004512: inositol-3-phosphate synthase activity | 6.16E-05 |
| 19 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 6.16E-05 |
| 20 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.62E-04 |
| 21 | GO:0016851: magnesium chelatase activity | 1.62E-04 |
| 22 | GO:0004792: thiosulfate sulfurtransferase activity | 1.62E-04 |
| 23 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.62E-04 |
| 24 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.62E-04 |
| 25 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.62E-04 |
| 26 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 1.62E-04 |
| 27 | GO:0008891: glycolate oxidase activity | 2.21E-04 |
| 28 | GO:0042578: phosphoric ester hydrolase activity | 3.51E-04 |
| 29 | GO:0016615: malate dehydrogenase activity | 3.51E-04 |
| 30 | GO:0000293: ferric-chelate reductase activity | 3.51E-04 |
| 31 | GO:0004849: uridine kinase activity | 4.20E-04 |
| 32 | GO:0030060: L-malate dehydrogenase activity | 4.20E-04 |
| 33 | GO:0008135: translation factor activity, RNA binding | 6.45E-04 |
| 34 | GO:0071949: FAD binding | 7.25E-04 |
| 35 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 8.07E-04 |
| 36 | GO:0008047: enzyme activator activity | 8.92E-04 |
| 37 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.16E-03 |
| 38 | GO:0003727: single-stranded RNA binding | 2.10E-03 |
| 39 | GO:0008514: organic anion transmembrane transporter activity | 2.10E-03 |
| 40 | GO:0047134: protein-disulfide reductase activity | 2.21E-03 |
| 41 | GO:0004791: thioredoxin-disulfide reductase activity | 2.57E-03 |
| 42 | GO:0010181: FMN binding | 2.57E-03 |
| 43 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.08E-03 |
| 44 | GO:0003746: translation elongation factor activity | 5.11E-03 |
| 45 | GO:0043621: protein self-association | 6.42E-03 |
| 46 | GO:0046872: metal ion binding | 6.65E-03 |
| 47 | GO:0016874: ligase activity | 9.16E-03 |
| 48 | GO:0015035: protein disulfide oxidoreductase activity | 9.75E-03 |
| 49 | GO:0030170: pyridoxal phosphate binding | 1.20E-02 |
| 50 | GO:0016491: oxidoreductase activity | 1.61E-02 |
| 51 | GO:0003924: GTPase activity | 2.95E-02 |
| 52 | GO:0016887: ATPase activity | 4.03E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.07E-20 |
| 2 | GO:0009941: chloroplast envelope | 4.90E-18 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 7.28E-14 |
| 4 | GO:0009579: thylakoid | 5.23E-12 |
| 5 | GO:0009570: chloroplast stroma | 3.69E-11 |
| 6 | GO:0009534: chloroplast thylakoid | 2.43E-10 |
| 7 | GO:0009517: PSII associated light-harvesting complex II | 8.03E-07 |
| 8 | GO:0009522: photosystem I | 1.52E-06 |
| 9 | GO:0009523: photosystem II | 1.73E-06 |
| 10 | GO:0048046: apoplast | 4.83E-06 |
| 11 | GO:0031969: chloroplast membrane | 1.24E-05 |
| 12 | GO:0030076: light-harvesting complex | 3.35E-05 |
| 13 | GO:0009706: chloroplast inner membrane | 3.96E-05 |
| 14 | GO:0010287: plastoglobule | 5.16E-05 |
| 15 | GO:0010007: magnesium chelatase complex | 1.09E-04 |
| 16 | GO:0005777: peroxisome | 9.27E-04 |
| 17 | GO:0016020: membrane | 1.44E-03 |
| 18 | GO:0042651: thylakoid membrane | 1.65E-03 |
| 19 | GO:0009654: photosystem II oxygen evolving complex | 1.65E-03 |
| 20 | GO:0019898: extrinsic component of membrane | 2.70E-03 |
| 21 | GO:0010319: stromule | 3.35E-03 |
| 22 | GO:0031977: thylakoid lumen | 5.75E-03 |
| 23 | GO:0009543: chloroplast thylakoid lumen | 1.12E-02 |
| 24 | GO:0005623: cell | 1.14E-02 |
| 25 | GO:0022626: cytosolic ribosome | 4.30E-02 |