co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G64090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
2	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
3	GO:1901799: negative regulation of proteasomal protein catabolic process	0.00E+00
4	GO:0001881: receptor recycling	0.00E+00
5	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
6	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
7	GO:0006511: ubiquitin-dependent protein catabolic process	1.36E-13
8	GO:0051603: proteolysis involved in cellular protein catabolic process	7.03E-08
9	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	9.44E-07
10	GO:0046686: response to cadmium ion	5.22E-05
11	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	6.38E-05
12	GO:1990542: mitochondrial transmembrane transport	1.27E-04
13	GO:0042964: thioredoxin reduction	1.27E-04
14	GO:0015786: UDP-glucose transport	2.94E-04
15	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	2.94E-04
16	GO:0051788: response to misfolded protein	2.94E-04
17	GO:0015783: GDP-fucose transport	4.86E-04
18	GO:0008333: endosome to lysosome transport	4.86E-04
19	GO:0015992: proton transport	5.39E-04
20	GO:0009647: skotomorphogenesis	6.95E-04
21	GO:0006168: adenine salvage	6.95E-04
22	GO:0001676: long-chain fatty acid metabolic process	6.95E-04
23	GO:0006166: purine ribonucleoside salvage	6.95E-04
24	GO:0072334: UDP-galactose transmembrane transport	6.95E-04
25	GO:0010363: regulation of plant-type hypersensitive response	9.21E-04
26	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.16E-03
27	GO:1902183: regulation of shoot apical meristem development	1.16E-03
28	GO:0044209: AMP salvage	1.16E-03
29	GO:0030163: protein catabolic process	1.20E-03
30	GO:0006914: autophagy	1.28E-03
31	GO:0043248: proteasome assembly	1.43E-03
32	GO:0009612: response to mechanical stimulus	1.71E-03
33	GO:1901001: negative regulation of response to salt stress	1.71E-03
34	GO:0048528: post-embryonic root development	2.01E-03
35	GO:0010043: response to zinc ion	2.27E-03
36	GO:0009690: cytokinin metabolic process	2.32E-03
37	GO:0031540: regulation of anthocyanin biosynthetic process	2.32E-03
38	GO:0006102: isocitrate metabolic process	2.32E-03
39	GO:0006506: GPI anchor biosynthetic process	2.32E-03
40	GO:0009853: photorespiration	2.48E-03
41	GO:0019430: removal of superoxide radicals	2.65E-03
42	GO:0015780: nucleotide-sugar transport	3.00E-03
43	GO:0098656: anion transmembrane transport	3.00E-03
44	GO:0046685: response to arsenic-containing substance	3.00E-03
45	GO:0030042: actin filament depolymerization	3.36E-03
46	GO:0043069: negative regulation of programmed cell death	3.73E-03
47	GO:0016192: vesicle-mediated transport	3.85E-03
48	GO:0072593: reactive oxygen species metabolic process	4.12E-03
49	GO:0016925: protein sumoylation	4.52E-03
50	GO:0071365: cellular response to auxin stimulus	4.52E-03
51	GO:0006820: anion transport	4.52E-03
52	GO:0007034: vacuolar transport	5.36E-03
53	GO:0010167: response to nitrate	5.80E-03
54	GO:0034976: response to endoplasmic reticulum stress	6.25E-03
55	GO:0006289: nucleotide-excision repair	6.71E-03
56	GO:0006487: protein N-linked glycosylation	6.71E-03
57	GO:0009116: nucleoside metabolic process	6.71E-03
58	GO:0061077: chaperone-mediated protein folding	7.68E-03
59	GO:0010584: pollen exine formation	9.21E-03
60	GO:0019722: calcium-mediated signaling	9.21E-03
61	GO:0051028: mRNA transport	9.75E-03
62	GO:0042147: retrograde transport, endosome to Golgi	9.75E-03
63	GO:0000413: protein peptidyl-prolyl isomerization	1.03E-02
64	GO:0010118: stomatal movement	1.03E-02
65	GO:0015031: protein transport	1.11E-02
66	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.18E-02
67	GO:0048825: cotyledon development	1.20E-02
68	GO:0006623: protein targeting to vacuole	1.20E-02
69	GO:0080156: mitochondrial mRNA modification	1.26E-02
70	GO:0010193: response to ozone	1.26E-02
71	GO:0016049: cell growth	1.90E-02
72	GO:0009817: defense response to fungus, incompatible interaction	1.97E-02
73	GO:0006499: N-terminal protein myristoylation	2.11E-02
74	GO:0009407: toxin catabolic process	2.11E-02
75	GO:0006099: tricarboxylic acid cycle	2.41E-02
76	GO:0045454: cell redox homeostasis	2.43E-02
77	GO:0006631: fatty acid metabolic process	2.64E-02
78	GO:0008283: cell proliferation	2.80E-02
79	GO:0009926: auxin polar transport	2.80E-02
80	GO:0051707: response to other organism	2.80E-02
81	GO:0008643: carbohydrate transport	2.96E-02
82	GO:0009636: response to toxic substance	3.04E-02
83	GO:0006855: drug transmembrane transport	3.12E-02
84	GO:0009846: pollen germination	3.29E-02
85	GO:0009736: cytokinin-activated signaling pathway	3.46E-02
86	GO:0048316: seed development	3.98E-02
87	GO:0009626: plant-type hypersensitive response	4.07E-02
88	GO:0009624: response to nematode	4.44E-02
89	GO:0009742: brassinosteroid mediated signaling pathway	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
2	GO:0004298: threonine-type endopeptidase activity	1.75E-22
3	GO:0008233: peptidase activity	2.85E-14
4	GO:0004656: procollagen-proline 4-dioxygenase activity	3.73E-07
5	GO:0031418: L-ascorbic acid binding	1.67E-05
6	GO:0019786: Atg8-specific protease activity	1.27E-04
7	GO:0045309: protein phosphorylated amino acid binding	1.54E-04
8	GO:0019904: protein domain specific binding	2.14E-04
9	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.51E-04
10	GO:0008517: folic acid transporter activity	2.94E-04
11	GO:0008805: carbon-monoxide oxygenase activity	2.94E-04
12	GO:0019779: Atg8 activating enzyme activity	2.94E-04
13	GO:0005457: GDP-fucose transmembrane transporter activity	4.86E-04
14	GO:0003999: adenine phosphoribosyltransferase activity	6.95E-04
15	GO:0005460: UDP-glucose transmembrane transporter activity	6.95E-04
16	GO:0017077: oxidative phosphorylation uncoupler activity	6.95E-04
17	GO:0004449: isocitrate dehydrogenase (NAD+) activity	6.95E-04
18	GO:0070628: proteasome binding	9.21E-04
19	GO:0004576: oligosaccharyl transferase activity	9.21E-04
20	GO:0019776: Atg8 ligase activity	9.21E-04
21	GO:0016004: phospholipase activator activity	9.21E-04
22	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	9.21E-04
23	GO:0031386: protein tag	1.16E-03
24	GO:0005459: UDP-galactose transmembrane transporter activity	1.16E-03
25	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.16E-03
26	GO:0004040: amidase activity	1.16E-03
27	GO:0031593: polyubiquitin binding	1.43E-03
28	GO:0102391: decanoate--CoA ligase activity	1.71E-03
29	GO:0004467: long-chain fatty acid-CoA ligase activity	2.01E-03
30	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.01E-03
31	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.01E-03
32	GO:0015288: porin activity	2.32E-03
33	GO:0008308: voltage-gated anion channel activity	2.65E-03
34	GO:0004364: glutathione transferase activity	3.06E-03
35	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.71E-03
36	GO:0008327: methyl-CpG binding	4.12E-03
37	GO:0008559: xenobiotic-transporting ATPase activity	4.12E-03
38	GO:0004129: cytochrome-c oxidase activity	4.12E-03
39	GO:0043130: ubiquitin binding	6.71E-03
40	GO:0005528: FK506 binding	6.71E-03
41	GO:0003756: protein disulfide isomerase activity	9.21E-03
42	GO:0008514: organic anion transmembrane transporter activity	9.21E-03
43	GO:0004791: thioredoxin-disulfide reductase activity	1.14E-02
44	GO:0016853: isomerase activity	1.14E-02
45	GO:0000166: nucleotide binding	1.23E-02
46	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.34E-02
47	GO:0003684: damaged DNA binding	1.44E-02
48	GO:0003746: translation elongation factor activity	2.33E-02
49	GO:0003697: single-stranded DNA binding	2.33E-02
50	GO:0005506: iron ion binding	2.92E-02
51	GO:0043621: protein self-association	2.96E-02
52	GO:0005198: structural molecule activity	3.04E-02
53	GO:0051287: NAD binding	3.20E-02
54	GO:0005515: protein binding	3.85E-02
55	GO:0003779: actin binding	4.35E-02
56	GO:0016887: ATPase activity	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0000502: proteasome complex	1.96E-26
2	GO:0005839: proteasome core complex	1.75E-22
3	GO:0019773: proteasome core complex, alpha-subunit complex	3.80E-11
4	GO:0005774: vacuolar membrane	6.05E-09
5	GO:0005783: endoplasmic reticulum	4.25E-07
6	GO:0005794: Golgi apparatus	6.58E-07
7	GO:0005773: vacuole	4.34E-06
8	GO:0000421: autophagosome membrane	8.26E-05
9	GO:0005829: cytosol	1.87E-04
10	GO:0005789: endoplasmic reticulum membrane	2.60E-04
11	GO:0005750: mitochondrial respiratory chain complex III	3.20E-04
12	GO:0046861: glyoxysomal membrane	4.86E-04
13	GO:0031410: cytoplasmic vesicle	5.89E-04
14	GO:0005775: vacuolar lumen	6.95E-04
15	GO:0005737: cytoplasm	8.50E-04
16	GO:0005776: autophagosome	9.21E-04
17	GO:0016471: vacuolar proton-transporting V-type ATPase complex	9.21E-04
18	GO:0008250: oligosaccharyltransferase complex	1.16E-03
19	GO:0005771: multivesicular body	1.43E-03
20	GO:0030904: retromer complex	1.43E-03
21	GO:0005788: endoplasmic reticulum lumen	1.60E-03
22	GO:0000325: plant-type vacuole	2.27E-03
23	GO:0022626: cytosolic ribosome	2.48E-03
24	GO:0046930: pore complex	2.65E-03
25	GO:0009514: glyoxysome	2.65E-03
26	GO:0031902: late endosome membrane	2.94E-03
27	GO:0031090: organelle membrane	3.00E-03
28	GO:0005740: mitochondrial envelope	3.73E-03
29	GO:0008541: proteasome regulatory particle, lid subcomplex	4.12E-03
30	GO:0005635: nuclear envelope	4.59E-03
31	GO:0005758: mitochondrial intermembrane space	6.71E-03
32	GO:0016021: integral component of membrane	7.15E-03
33	GO:0045271: respiratory chain complex I	7.19E-03
34	GO:0070469: respiratory chain	7.19E-03
35	GO:0005741: mitochondrial outer membrane	7.68E-03
36	GO:0015629: actin cytoskeleton	8.69E-03
37	GO:0005886: plasma membrane	1.68E-02
38	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.79E-02
39	GO:0005874: microtubule	1.96E-02
40	GO:0005643: nuclear pore	1.97E-02
41	GO:0015934: large ribosomal subunit	2.19E-02
42	GO:0005819: spindle	2.48E-02
43	GO:0009506: plasmodesma	2.84E-02
44	GO:0031966: mitochondrial membrane	3.29E-02
45	GO:0005681: spliceosomal complex	3.89E-02
46	GO:0005747: mitochondrial respiratory chain complex I	3.98E-02
47	GO:0010008: endosome membrane	3.98E-02
48	GO:0005732: small nucleolar ribonucleoprotein complex	4.72E-02