GO Enrichment Analysis of Co-expressed Genes with
AT1G63660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080180: 2-methylguanosine metabolic process | 0.00E+00 |
| 2 | GO:0006177: GMP biosynthetic process | 1.13E-05 |
| 3 | GO:0009451: RNA modification | 2.17E-05 |
| 4 | GO:0045041: protein import into mitochondrial intermembrane space | 3.00E-05 |
| 5 | GO:0051131: chaperone-mediated protein complex assembly | 8.23E-05 |
| 6 | GO:1900864: mitochondrial RNA modification | 1.14E-04 |
| 7 | GO:0016554: cytidine to uridine editing | 1.86E-04 |
| 8 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.25E-04 |
| 9 | GO:0006458: 'de novo' protein folding | 2.25E-04 |
| 10 | GO:0042026: protein refolding | 2.25E-04 |
| 11 | GO:0006400: tRNA modification | 2.66E-04 |
| 12 | GO:0009396: folic acid-containing compound biosynthetic process | 2.66E-04 |
| 13 | GO:0006261: DNA-dependent DNA replication | 3.52E-04 |
| 14 | GO:0035999: tetrahydrofolate interconversion | 4.44E-04 |
| 15 | GO:1900865: chloroplast RNA modification | 4.44E-04 |
| 16 | GO:0061077: chaperone-mediated protein folding | 9.65E-04 |
| 17 | GO:0007005: mitochondrion organization | 1.02E-03 |
| 18 | GO:0006730: one-carbon metabolic process | 1.02E-03 |
| 19 | GO:0010501: RNA secondary structure unwinding | 1.26E-03 |
| 20 | GO:0000413: protein peptidyl-prolyl isomerization | 1.26E-03 |
| 21 | GO:0080156: mitochondrial mRNA modification | 1.52E-03 |
| 22 | GO:0009853: photorespiration | 2.72E-03 |
| 23 | GO:0006364: rRNA processing | 3.95E-03 |
| 24 | GO:0006396: RNA processing | 5.13E-03 |
| 25 | GO:0000398: mRNA splicing, via spliceosome | 5.55E-03 |
| 26 | GO:0009409: response to cold | 6.46E-03 |
| 27 | GO:0009790: embryo development | 6.54E-03 |
| 28 | GO:0046686: response to cadmium ion | 7.43E-03 |
| 29 | GO:0008380: RNA splicing | 8.30E-03 |
| 30 | GO:0042254: ribosome biogenesis | 1.01E-02 |
| 31 | GO:0032259: methylation | 1.48E-02 |
| 32 | GO:0009408: response to heat | 1.53E-02 |
| 33 | GO:0006457: protein folding | 2.76E-02 |
| 34 | GO:0009414: response to water deprivation | 3.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 2 | GO:0003723: RNA binding | 2.81E-05 |
| 3 | GO:0003938: IMP dehydrogenase activity | 3.00E-05 |
| 4 | GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity | 3.00E-05 |
| 5 | GO:0004477: methenyltetrahydrofolate cyclohydrolase activity | 3.00E-05 |
| 6 | GO:0004519: endonuclease activity | 1.17E-04 |
| 7 | GO:0003689: DNA clamp loader activity | 1.49E-04 |
| 8 | GO:0008173: RNA methyltransferase activity | 3.52E-04 |
| 9 | GO:0044183: protein binding involved in protein folding | 5.39E-04 |
| 10 | GO:0004004: ATP-dependent RNA helicase activity | 2.17E-03 |
| 11 | GO:0050897: cobalt ion binding | 2.56E-03 |
| 12 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.59E-03 |
| 13 | GO:0051082: unfolded protein binding | 5.03E-03 |
| 14 | GO:0008026: ATP-dependent helicase activity | 5.24E-03 |
| 15 | GO:0003729: mRNA binding | 7.10E-03 |
| 16 | GO:0008168: methyltransferase activity | 9.69E-03 |
| 17 | GO:0016887: ATPase activity | 2.08E-02 |
| 18 | GO:0000166: nucleotide binding | 2.29E-02 |
| 19 | GO:0005507: copper ion binding | 2.95E-02 |
| 20 | GO:0003824: catalytic activity | 4.06E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005663: DNA replication factor C complex | 1.14E-04 |
| 2 | GO:0000178: exosome (RNase complex) | 1.49E-04 |
| 3 | GO:0032040: small-subunit processome | 5.89E-04 |
| 4 | GO:0005739: mitochondrion | 2.02E-03 |
| 5 | GO:0005681: spliceosomal complex | 4.43E-03 |
| 6 | GO:0005747: mitochondrial respiratory chain complex I | 4.53E-03 |
| 7 | GO:0005759: mitochondrial matrix | 6.87E-03 |
| 8 | GO:0005730: nucleolus | 8.07E-03 |
| 9 | GO:0009507: chloroplast | 1.02E-02 |
| 10 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.06E-02 |
| 11 | GO:0009535: chloroplast thylakoid membrane | 1.07E-02 |
| 12 | GO:0022625: cytosolic large ribosomal subunit | 1.20E-02 |
| 13 | GO:0005774: vacuolar membrane | 1.66E-02 |
| 14 | GO:0022626: cytosolic ribosome | 2.22E-02 |
| 15 | GO:0009941: chloroplast envelope | 2.26E-02 |
| 16 | GO:0005773: vacuole | 2.55E-02 |
| 17 | GO:0009534: chloroplast thylakoid | 2.63E-02 |
| 18 | GO:0005829: cytosol | 3.00E-02 |
| 19 | GO:0005840: ribosome | 3.93E-02 |
| 20 | GO:0009536: plastid | 4.39E-02 |
| 21 | GO:0009505: plant-type cell wall | 4.46E-02 |