co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G61360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
2	GO:0032497: detection of lipopolysaccharide	0.00E+00
3	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
4	GO:0032499: detection of peptidoglycan	0.00E+00
5	GO:2001143: N-methylnicotinate transport	0.00E+00
6	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
7	GO:1903086: negative regulation of sinapate ester biosynthetic process	0.00E+00
8	GO:0006862: nucleotide transport	0.00E+00
9	GO:2001142: nicotinate transport	0.00E+00
10	GO:0042353: fucose biosynthetic process	0.00E+00
11	GO:0010200: response to chitin	2.20E-14
12	GO:0006468: protein phosphorylation	7.02E-08
13	GO:0002679: respiratory burst involved in defense response	9.06E-08
14	GO:0006955: immune response	3.31E-06
15	GO:0051865: protein autoubiquitination	1.02E-05
16	GO:1902347: response to strigolactone	4.33E-05
17	GO:0042742: defense response to bacterium	5.12E-05
18	GO:0010337: regulation of salicylic acid metabolic process	1.01E-04
19	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.39E-04
20	GO:0045010: actin nucleation	2.32E-04
21	GO:0080157: regulation of plant-type cell wall organization or biogenesis	2.51E-04
22	GO:0050691: regulation of defense response to virus by host	2.51E-04
23	GO:0032491: detection of molecule of fungal origin	2.51E-04
24	GO:0010726: positive regulation of hydrogen peroxide metabolic process	2.51E-04
25	GO:0002229: defense response to oomycetes	2.76E-04
26	GO:0006952: defense response	3.24E-04
27	GO:0019538: protein metabolic process	4.80E-04
28	GO:0052542: defense response by callose deposition	5.53E-04
29	GO:0046939: nucleotide phosphorylation	5.53E-04
30	GO:0042754: negative regulation of circadian rhythm	5.53E-04
31	GO:0010372: positive regulation of gibberellin biosynthetic process	5.53E-04
32	GO:0046777: protein autophosphorylation	6.23E-04
33	GO:0008219: cell death	6.31E-04
34	GO:0055046: microgametogenesis	7.18E-04
35	GO:0009611: response to wounding	7.99E-04
36	GO:0045087: innate immune response	8.49E-04
37	GO:0070588: calcium ion transmembrane transport	9.03E-04
38	GO:0009863: salicylic acid mediated signaling pathway	1.11E-03
39	GO:0007166: cell surface receptor signaling pathway	1.20E-03
40	GO:0009695: jasmonic acid biosynthetic process	1.22E-03
41	GO:0033014: tetrapyrrole biosynthetic process	1.28E-03
42	GO:0071323: cellular response to chitin	1.28E-03
43	GO:0043207: response to external biotic stimulus	1.28E-03
44	GO:0030100: regulation of endocytosis	1.28E-03
45	GO:0009399: nitrogen fixation	1.28E-03
46	GO:0009686: gibberellin biosynthetic process	1.59E-03
47	GO:0010107: potassium ion import	1.71E-03
48	GO:0034440: lipid oxidation	1.71E-03
49	GO:0071219: cellular response to molecule of bacterial origin	1.71E-03
50	GO:0015743: malate transport	1.71E-03
51	GO:0045227: capsule polysaccharide biosynthetic process	1.71E-03
52	GO:0033358: UDP-L-arabinose biosynthetic process	1.71E-03
53	GO:0016310: phosphorylation	2.18E-03
54	GO:0045487: gibberellin catabolic process	2.19E-03
55	GO:2000762: regulation of phenylpropanoid metabolic process	2.19E-03
56	GO:0030041: actin filament polymerization	2.19E-03
57	GO:0009164: nucleoside catabolic process	2.19E-03
58	GO:0009823: cytokinin catabolic process	2.19E-03
59	GO:0048544: recognition of pollen	2.34E-03
60	GO:0080167: response to karrikin	2.63E-03
61	GO:1900425: negative regulation of defense response to bacterium	2.70E-03
62	GO:0010942: positive regulation of cell death	2.70E-03
63	GO:0006751: glutathione catabolic process	2.70E-03
64	GO:0010256: endomembrane system organization	2.70E-03
65	GO:0048317: seed morphogenesis	2.70E-03
66	GO:0009742: brassinosteroid mediated signaling pathway	2.85E-03
67	GO:0006979: response to oxidative stress	3.13E-03
68	GO:0080086: stamen filament development	3.24E-03
69	GO:0006904: vesicle docking involved in exocytosis	3.44E-03
70	GO:0016567: protein ubiquitination	3.64E-03
71	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.82E-03
72	GO:0010161: red light signaling pathway	3.82E-03
73	GO:0009845: seed germination	3.89E-03
74	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.09E-03
75	GO:1900150: regulation of defense response to fungus	4.44E-03
76	GO:0006402: mRNA catabolic process	4.44E-03
77	GO:0009690: cytokinin metabolic process	4.44E-03
78	GO:0048658: anther wall tapetum development	4.44E-03
79	GO:0009737: response to abscisic acid	4.66E-03
80	GO:0009699: phenylpropanoid biosynthetic process	5.08E-03
81	GO:0009932: cell tip growth	5.08E-03
82	GO:0009753: response to jasmonic acid	5.30E-03
83	GO:0090333: regulation of stomatal closure	5.75E-03
84	GO:0006783: heme biosynthetic process	5.75E-03
85	GO:0098656: anion transmembrane transport	5.75E-03
86	GO:0008202: steroid metabolic process	6.46E-03
87	GO:0006779: porphyrin-containing compound biosynthetic process	6.46E-03
88	GO:0009617: response to bacterium	6.64E-03
89	GO:0007064: mitotic sister chromatid cohesion	7.20E-03
90	GO:0048829: root cap development	7.20E-03
91	GO:0006782: protoporphyrinogen IX biosynthetic process	7.20E-03
92	GO:0006839: mitochondrial transport	7.28E-03
93	GO:0046686: response to cadmium ion	7.35E-03
94	GO:0006887: exocytosis	7.59E-03
95	GO:0006970: response to osmotic stress	1.02E-02
96	GO:0034605: cellular response to heat	1.04E-02
97	GO:0002237: response to molecule of bacterial origin	1.04E-02
98	GO:0009738: abscisic acid-activated signaling pathway	1.08E-02
99	GO:0071732: cellular response to nitric oxide	1.13E-02
100	GO:0090351: seedling development	1.13E-02
101	GO:0046854: phosphatidylinositol phosphorylation	1.13E-02
102	GO:0009969: xyloglucan biosynthetic process	1.13E-02
103	GO:0009225: nucleotide-sugar metabolic process	1.13E-02
104	GO:0009901: anther dehiscence	1.13E-02
105	GO:0009555: pollen development	1.14E-02
106	GO:0010224: response to UV-B	1.15E-02
107	GO:0009651: response to salt stress	1.23E-02
108	GO:0035556: intracellular signal transduction	1.24E-02
109	GO:0009626: plant-type hypersensitive response	1.40E-02
110	GO:0009620: response to fungus	1.45E-02
111	GO:0031408: oxylipin biosynthetic process	1.50E-02
112	GO:0016998: cell wall macromolecule catabolic process	1.50E-02
113	GO:0098542: defense response to other organism	1.50E-02
114	GO:0016226: iron-sulfur cluster assembly	1.60E-02
115	GO:0030433: ubiquitin-dependent ERAD pathway	1.60E-02
116	GO:0030245: cellulose catabolic process	1.60E-02
117	GO:0071369: cellular response to ethylene stimulus	1.71E-02
118	GO:0040007: growth	1.71E-02
119	GO:0006012: galactose metabolic process	1.71E-02
120	GO:0071215: cellular response to abscisic acid stimulus	1.71E-02
121	GO:0019722: calcium-mediated signaling	1.81E-02
122	GO:0006817: phosphate ion transport	1.81E-02
123	GO:0009306: protein secretion	1.81E-02
124	GO:0010089: xylem development	1.81E-02
125	GO:0006810: transport	1.99E-02
126	GO:0010118: stomatal movement	2.02E-02
127	GO:0048653: anther development	2.02E-02
128	GO:0042631: cellular response to water deprivation	2.02E-02
129	GO:0009960: endosperm development	2.14E-02
130	GO:0009749: response to glucose	2.36E-02
131	GO:0010193: response to ozone	2.48E-02
132	GO:0006891: intra-Golgi vesicle-mediated transport	2.48E-02
133	GO:0031047: gene silencing by RNA	2.60E-02
134	GO:0010090: trichome morphogenesis	2.72E-02
135	GO:1901657: glycosyl compound metabolic process	2.72E-02
136	GO:0071281: cellular response to iron ion	2.72E-02
137	GO:0007623: circadian rhythm	2.75E-02
138	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.83E-02
139	GO:0009639: response to red or far red light	2.85E-02
140	GO:0009414: response to water deprivation	3.14E-02
141	GO:0006470: protein dephosphorylation	3.14E-02
142	GO:0001666: response to hypoxia	3.23E-02
143	GO:0009615: response to virus	3.23E-02
144	GO:0009816: defense response to bacterium, incompatible interaction	3.36E-02
145	GO:0007165: signal transduction	3.57E-02
146	GO:0048573: photoperiodism, flowering	3.62E-02
147	GO:0015995: chlorophyll biosynthetic process	3.62E-02
148	GO:0016049: cell growth	3.76E-02
149	GO:0009817: defense response to fungus, incompatible interaction	3.90E-02
150	GO:0010311: lateral root formation	4.04E-02
151	GO:0006499: N-terminal protein myristoylation	4.18E-02
152	GO:0009637: response to blue light	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
2	GO:2001080: chitosan binding	0.00E+00
3	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
4	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
5	GO:0090416: nicotinate transporter activity	0.00E+00
6	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
7	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
8	GO:0005522: profilin binding	0.00E+00
9	GO:0016301: kinase activity	1.93E-09
10	GO:0004674: protein serine/threonine kinase activity	5.66E-07
11	GO:0005524: ATP binding	9.86E-07
12	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.34E-06
13	GO:0004672: protein kinase activity	3.86E-05
14	GO:0047631: ADP-ribose diphosphatase activity	6.89E-05
15	GO:0015085: calcium ion transmembrane transporter activity	2.51E-04
16	GO:0030246: carbohydrate binding	3.58E-04
17	GO:0050660: flavin adenine dinucleotide binding	4.88E-04
18	GO:1990585: hydroxyproline O-arabinosyltransferase activity	5.53E-04
19	GO:0004103: choline kinase activity	5.53E-04
20	GO:0008883: glutamyl-tRNA reductase activity	5.53E-04
21	GO:0019888: protein phosphatase regulator activity	7.18E-04
22	GO:0005388: calcium-transporting ATPase activity	7.18E-04
23	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.83E-04
24	GO:0003840: gamma-glutamyltransferase activity	8.99E-04
25	GO:0036374: glutathione hydrolase activity	8.99E-04
26	GO:0046423: allene-oxide cyclase activity	8.99E-04
27	GO:0004383: guanylate cyclase activity	8.99E-04
28	GO:0016165: linoleate 13S-lipoxygenase activity	8.99E-04
29	GO:0019201: nucleotide kinase activity	1.28E-03
30	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.28E-03
31	GO:0001653: peptide receptor activity	1.28E-03
32	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.28E-03
33	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.28E-03
34	GO:0005253: anion channel activity	1.71E-03
35	GO:0050373: UDP-arabinose 4-epimerase activity	1.71E-03
36	GO:0005516: calmodulin binding	1.71E-03
37	GO:0043015: gamma-tubulin binding	1.71E-03
38	GO:0019199: transmembrane receptor protein kinase activity	1.71E-03
39	GO:0008514: organic anion transmembrane transporter activity	1.73E-03
40	GO:0004842: ubiquitin-protein transferase activity	1.81E-03
41	GO:0043565: sequence-specific DNA binding	1.86E-03
42	GO:0018685: alkane 1-monooxygenase activity	2.19E-03
43	GO:0002020: protease binding	2.19E-03
44	GO:0004356: glutamate-ammonia ligase activity	2.19E-03
45	GO:0019139: cytokinin dehydrogenase activity	2.19E-03
46	GO:0003779: actin binding	2.55E-03
47	GO:0000210: NAD+ diphosphatase activity	2.70E-03
48	GO:0035673: oligopeptide transmembrane transporter activity	2.70E-03
49	GO:0003978: UDP-glucose 4-epimerase activity	3.24E-03
50	GO:0004017: adenylate kinase activity	3.24E-03
51	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.24E-03
52	GO:0019900: kinase binding	3.24E-03
53	GO:0051020: GTPase binding	3.24E-03
54	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	3.24E-03
55	GO:0008143: poly(A) binding	3.82E-03
56	GO:0004143: diacylglycerol kinase activity	3.82E-03
57	GO:0016621: cinnamoyl-CoA reductase activity	3.82E-03
58	GO:0015140: malate transmembrane transporter activity	3.82E-03
59	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.44E-03
60	GO:0004430: 1-phosphatidylinositol 4-kinase activity	5.08E-03
61	GO:0003951: NAD+ kinase activity	5.08E-03
62	GO:0008142: oxysterol binding	5.08E-03
63	GO:0009055: electron carrier activity	5.30E-03
64	GO:0015198: oligopeptide transporter activity	8.75E-03
65	GO:0005315: inorganic phosphate transmembrane transporter activity	9.57E-03
66	GO:0008131: primary amine oxidase activity	1.04E-02
67	GO:0008061: chitin binding	1.13E-02
68	GO:0031625: ubiquitin protein ligase binding	1.23E-02
69	GO:0051087: chaperone binding	1.41E-02
70	GO:0033612: receptor serine/threonine kinase binding	1.50E-02
71	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.50E-02
72	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.53E-02
73	GO:0022891: substrate-specific transmembrane transporter activity	1.71E-02
74	GO:0004722: protein serine/threonine phosphatase activity	1.72E-02
75	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.75E-02
76	GO:0050662: coenzyme binding	2.25E-02
77	GO:0015144: carbohydrate transmembrane transporter activity	2.38E-02
78	GO:0004518: nuclease activity	2.60E-02
79	GO:0005351: sugar:proton symporter activity	2.69E-02
80	GO:0051015: actin filament binding	2.72E-02
81	GO:0005509: calcium ion binding	2.89E-02
82	GO:0044212: transcription regulatory region DNA binding	3.25E-02
83	GO:0008375: acetylglucosaminyltransferase activity	3.49E-02
84	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.49E-02
85	GO:0030247: polysaccharide binding	3.62E-02
86	GO:0004721: phosphoprotein phosphatase activity	3.62E-02
87	GO:0004683: calmodulin-dependent protein kinase activity	3.62E-02
88	GO:0102483: scopolin beta-glucosidase activity	3.62E-02
89	GO:0005215: transporter activity	3.76E-02
90	GO:0003682: chromatin binding	4.48E-02
91	GO:0046872: metal ion binding	4.84E-02
92	GO:0008422: beta-glucosidase activity	4.90E-02
93	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	3.13E-09
2	GO:0016021: integral component of membrane	8.80E-05
3	GO:0016442: RISC complex	2.51E-04
4	GO:0005911: cell-cell junction	2.51E-04
5	GO:0010494: cytoplasmic stress granule	3.46E-04
6	GO:0000159: protein phosphatase type 2A complex	5.54E-04
7	GO:0070062: extracellular exosome	1.28E-03
8	GO:0000145: exocyst	2.86E-03
9	GO:0030173: integral component of Golgi membrane	3.24E-03
10	GO:0016363: nuclear matrix	3.24E-03
11	GO:0032580: Golgi cisterna membrane	3.24E-03
12	GO:0090404: pollen tube tip	7.96E-03
13	GO:0048471: perinuclear region of cytoplasm	7.96E-03
14	GO:0090406: pollen tube	8.24E-03
15	GO:0005768: endosome	8.55E-03
16	GO:0009506: plasmodesma	1.09E-02
17	GO:0005795: Golgi stack	1.13E-02
18	GO:0043234: protein complex	1.22E-02
19	GO:0005758: mitochondrial intermembrane space	1.31E-02
20	GO:0010008: endosome membrane	1.36E-02
21	GO:0030136: clathrin-coated vesicle	1.92E-02
22	GO:0005887: integral component of plasma membrane	2.92E-02
23	GO:0005778: peroxisomal membrane	2.97E-02
24	GO:0000932: P-body	3.23E-02
25	GO:0009505: plant-type cell wall	4.50E-02
26	GO:0016020: membrane	4.67E-02