co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G61150

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0034394: protein localization to cell surface	0.00E+00
2	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
3	GO:0060560: developmental growth involved in morphogenesis	0.00E+00
4	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
5	GO:0090239: regulation of histone H4 acetylation	0.00E+00
6	GO:1901799: negative regulation of proteasomal protein catabolic process	0.00E+00
7	GO:0006489: dolichyl diphosphate biosynthetic process	0.00E+00
8	GO:0001881: receptor recycling	0.00E+00
9	GO:0006592: ornithine biosynthetic process	0.00E+00
10	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
11	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
12	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
13	GO:0006511: ubiquitin-dependent protein catabolic process	2.45E-22
14	GO:0046686: response to cadmium ion	2.28E-07
15	GO:0051603: proteolysis involved in cellular protein catabolic process	5.00E-07
16	GO:0008333: endosome to lysosome transport	6.94E-06
17	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	9.51E-06
18	GO:0030163: protein catabolic process	1.11E-05
19	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	6.98E-05
20	GO:0043248: proteasome assembly	6.98E-05
21	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	2.00E-04
22	GO:0010265: SCF complex assembly	2.00E-04
23	GO:2001006: regulation of cellulose biosynthetic process	2.00E-04
24	GO:0006434: seryl-tRNA aminoacylation	2.00E-04
25	GO:0051788: response to misfolded protein	4.48E-04
26	GO:0006435: threonyl-tRNA aminoacylation	4.48E-04
27	GO:0015786: UDP-glucose transport	4.48E-04
28	GO:0071668: plant-type cell wall assembly	4.48E-04
29	GO:0043981: histone H4-K5 acetylation	4.48E-04
30	GO:0046168: glycerol-3-phosphate catabolic process	7.29E-04
31	GO:0010498: proteasomal protein catabolic process	7.29E-04
32	GO:1902626: assembly of large subunit precursor of preribosome	7.29E-04
33	GO:1904278: positive regulation of wax biosynthetic process	7.29E-04
34	GO:0016255: attachment of GPI anchor to protein	7.29E-04
35	GO:0046417: chorismate metabolic process	7.29E-04
36	GO:0015783: GDP-fucose transport	7.29E-04
37	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	7.29E-04
38	GO:0009663: plasmodesma organization	7.29E-04
39	GO:0010452: histone H3-K36 methylation	7.29E-04
40	GO:0000027: ribosomal large subunit assembly	8.13E-04
41	GO:0006072: glycerol-3-phosphate metabolic process	1.04E-03
42	GO:0009647: skotomorphogenesis	1.04E-03
43	GO:0006165: nucleoside diphosphate phosphorylation	1.04E-03
44	GO:0006228: UTP biosynthetic process	1.04E-03
45	GO:0010255: glucose mediated signaling pathway	1.04E-03
46	GO:0006168: adenine salvage	1.04E-03
47	GO:0006882: cellular zinc ion homeostasis	1.04E-03
48	GO:0001676: long-chain fatty acid metabolic process	1.04E-03
49	GO:0046513: ceramide biosynthetic process	1.04E-03
50	GO:0046836: glycolipid transport	1.04E-03
51	GO:0006166: purine ribonucleoside salvage	1.04E-03
52	GO:0070301: cellular response to hydrogen peroxide	1.04E-03
53	GO:0006241: CTP biosynthetic process	1.04E-03
54	GO:0072334: UDP-galactose transmembrane transport	1.04E-03
55	GO:0030433: ubiquitin-dependent ERAD pathway	1.07E-03
56	GO:0042147: retrograde transport, endosome to Golgi	1.36E-03
57	GO:0006621: protein retention in ER lumen	1.38E-03
58	GO:0010387: COP9 signalosome assembly	1.38E-03
59	GO:0006183: GTP biosynthetic process	1.38E-03
60	GO:0010363: regulation of plant-type hypersensitive response	1.38E-03
61	GO:0000413: protein peptidyl-prolyl isomerization	1.47E-03
62	GO:0036065: fucosylation	1.76E-03
63	GO:1902183: regulation of shoot apical meristem development	1.76E-03
64	GO:0044209: AMP salvage	1.76E-03
65	GO:0010375: stomatal complex patterning	1.76E-03
66	GO:0006014: D-ribose metabolic process	2.17E-03
67	GO:0051568: histone H3-K4 methylation	2.17E-03
68	GO:0009612: response to mechanical stimulus	2.60E-03
69	GO:0000245: spliceosomal complex assembly	2.60E-03
70	GO:0009554: megasporogenesis	2.60E-03
71	GO:1901001: negative regulation of response to salt stress	2.60E-03
72	GO:0009793: embryo development ending in seed dormancy	2.72E-03
73	GO:0000338: protein deneddylation	3.06E-03
74	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	3.06E-03
75	GO:0032880: regulation of protein localization	3.06E-03
76	GO:0048528: post-embryonic root development	3.06E-03
77	GO:0009690: cytokinin metabolic process	3.55E-03
78	GO:0010078: maintenance of root meristem identity	3.55E-03
79	GO:0050821: protein stabilization	3.55E-03
80	GO:0031540: regulation of anthocyanin biosynthetic process	3.55E-03
81	GO:0006526: arginine biosynthetic process	4.06E-03
82	GO:0010204: defense response signaling pathway, resistance gene-independent	4.06E-03
83	GO:0009808: lignin metabolic process	4.06E-03
84	GO:0071482: cellular response to light stimulus	4.06E-03
85	GO:0022900: electron transport chain	4.06E-03
86	GO:0010043: response to zinc ion	4.21E-03
87	GO:0048589: developmental growth	4.60E-03
88	GO:0015780: nucleotide-sugar transport	4.60E-03
89	GO:0098656: anion transmembrane transport	4.60E-03
90	GO:0046685: response to arsenic-containing substance	4.60E-03
91	GO:0009245: lipid A biosynthetic process	4.60E-03
92	GO:0042761: very long-chain fatty acid biosynthetic process	5.15E-03
93	GO:0010449: root meristem growth	5.15E-03
94	GO:0071577: zinc II ion transmembrane transport	5.15E-03
95	GO:0016441: posttranscriptional gene silencing	5.74E-03
96	GO:0010215: cellulose microfibril organization	5.74E-03
97	GO:0009908: flower development	5.94E-03
98	GO:0008283: cell proliferation	5.94E-03
99	GO:0009073: aromatic amino acid family biosynthetic process	6.34E-03
100	GO:0048229: gametophyte development	6.34E-03
101	GO:0016485: protein processing	6.34E-03
102	GO:0006820: anion transport	6.96E-03
103	GO:0071365: cellular response to auxin stimulus	6.96E-03
104	GO:0010102: lateral root morphogenesis	7.61E-03
105	GO:0006626: protein targeting to mitochondrion	7.61E-03
106	GO:2000028: regulation of photoperiodism, flowering	7.61E-03
107	GO:0007034: vacuolar transport	8.28E-03
108	GO:0048467: gynoecium development	8.28E-03
109	GO:0009969: xyloglucan biosynthetic process	8.97E-03
110	GO:0006406: mRNA export from nucleus	1.04E-02
111	GO:0006289: nucleotide-excision repair	1.04E-02
112	GO:0006487: protein N-linked glycosylation	1.04E-02
113	GO:0009116: nucleoside metabolic process	1.04E-02
114	GO:0009553: embryo sac development	1.11E-02
115	GO:0016226: iron-sulfur cluster assembly	1.27E-02
116	GO:0007005: mitochondrion organization	1.27E-02
117	GO:0000398: mRNA splicing, via spliceosome	1.32E-02
118	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.35E-02
119	GO:0010584: pollen exine formation	1.43E-02
120	GO:0010051: xylem and phloem pattern formation	1.60E-02
121	GO:0008360: regulation of cell shape	1.69E-02
122	GO:0006662: glycerol ether metabolic process	1.69E-02
123	GO:0009651: response to salt stress	1.71E-02
124	GO:0006623: protein targeting to vacuole	1.87E-02
125	GO:0010183: pollen tube guidance	1.87E-02
126	GO:0048825: cotyledon development	1.87E-02
127	GO:0009749: response to glucose	1.87E-02
128	GO:0007275: multicellular organism development	1.87E-02
129	GO:0009556: microsporogenesis	1.87E-02
130	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.97E-02
131	GO:0010193: response to ozone	1.97E-02
132	GO:0009630: gravitropism	2.06E-02
133	GO:0016579: protein deubiquitination	2.45E-02
134	GO:0009627: systemic acquired resistance	2.76E-02
135	GO:0006888: ER to Golgi vesicle-mediated transport	2.87E-02
136	GO:0016049: cell growth	2.98E-02
137	GO:0009817: defense response to fungus, incompatible interaction	3.09E-02
138	GO:0030244: cellulose biosynthetic process	3.09E-02
139	GO:0042254: ribosome biogenesis	3.13E-02
140	GO:0009832: plant-type cell wall biogenesis	3.20E-02
141	GO:0009631: cold acclimation	3.42E-02
142	GO:0009910: negative regulation of flower development	3.42E-02
143	GO:0000724: double-strand break repair via homologous recombination	3.54E-02
144	GO:0006457: protein folding	3.74E-02
145	GO:0034599: cellular response to oxidative stress	3.77E-02
146	GO:0006508: proteolysis	3.93E-02
147	GO:0016192: vesicle-mediated transport	3.99E-02
148	GO:0030001: metal ion transport	4.01E-02
149	GO:0006631: fatty acid metabolic process	4.13E-02
150	GO:0009926: auxin polar transport	4.37E-02
151	GO:0051707: response to other organism	4.37E-02
152	GO:0045454: cell redox homeostasis	4.54E-02
153	GO:0008643: carbohydrate transport	4.62E-02
154	GO:0009965: leaf morphogenesis	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0008777: acetylornithine deacetylase activity	0.00E+00
2	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
3	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
4	GO:0004298: threonine-type endopeptidase activity	7.03E-31
5	GO:0008233: peptidase activity	2.17E-23
6	GO:0031593: polyubiquitin binding	6.98E-05
7	GO:0036402: proteasome-activating ATPase activity	6.98E-05
8	GO:0004828: serine-tRNA ligase activity	2.00E-04
9	GO:0047326: inositol tetrakisphosphate 5-kinase activity	2.00E-04
10	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	2.00E-04
11	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	2.00E-04
12	GO:0035614: snRNA stem-loop binding	2.00E-04
13	GO:0000824: inositol tetrakisphosphate 3-kinase activity	2.00E-04
14	GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity	2.00E-04
15	GO:0003923: GPI-anchor transamidase activity	4.48E-04
16	GO:1990585: hydroxyproline O-arabinosyltransferase activity	4.48E-04
17	GO:0004106: chorismate mutase activity	4.48E-04
18	GO:0004829: threonine-tRNA ligase activity	4.48E-04
19	GO:0030619: U1 snRNA binding	4.48E-04
20	GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity	4.48E-04
21	GO:0050291: sphingosine N-acyltransferase activity	4.48E-04
22	GO:0051879: Hsp90 protein binding	4.48E-04
23	GO:0017025: TBP-class protein binding	6.61E-04
24	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	7.29E-04
25	GO:0005457: GDP-fucose transmembrane transporter activity	7.29E-04
26	GO:0008430: selenium binding	7.29E-04
27	GO:0043130: ubiquitin binding	8.13E-04
28	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	9.42E-04
29	GO:0003999: adenine phosphoribosyltransferase activity	1.04E-03
30	GO:0005460: UDP-glucose transmembrane transporter activity	1.04E-03
31	GO:0004550: nucleoside diphosphate kinase activity	1.04E-03
32	GO:0008097: 5S rRNA binding	1.04E-03
33	GO:0017089: glycolipid transporter activity	1.04E-03
34	GO:0070628: proteasome binding	1.38E-03
35	GO:0051861: glycolipid binding	1.38E-03
36	GO:0046923: ER retention sequence binding	1.38E-03
37	GO:0005459: UDP-galactose transmembrane transporter activity	1.76E-03
38	GO:0031177: phosphopantetheine binding	2.17E-03
39	GO:0008237: metallopeptidase activity	2.50E-03
40	GO:0102391: decanoate--CoA ligase activity	2.60E-03
41	GO:0004747: ribokinase activity	2.60E-03
42	GO:0000035: acyl binding	2.60E-03
43	GO:0004467: long-chain fatty acid-CoA ligase activity	3.06E-03
44	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	3.06E-03
45	GO:0005338: nucleotide-sugar transmembrane transporter activity	3.06E-03
46	GO:0008235: metalloexopeptidase activity	3.06E-03
47	GO:0042162: telomeric DNA binding	3.06E-03
48	GO:0008121: ubiquinol-cytochrome-c reductase activity	3.06E-03
49	GO:0015288: porin activity	3.55E-03
50	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	3.55E-03
51	GO:0008308: voltage-gated anion channel activity	4.06E-03
52	GO:0050897: cobalt ion binding	4.21E-03
53	GO:0008417: fucosyltransferase activity	4.60E-03
54	GO:0003746: translation elongation factor activity	4.61E-03
55	GO:0016887: ATPase activity	5.63E-03
56	GO:0008794: arsenate reductase (glutaredoxin) activity	6.34E-03
57	GO:0008327: methyl-CpG binding	6.34E-03
58	GO:0004177: aminopeptidase activity	6.34E-03
59	GO:0004175: endopeptidase activity	8.28E-03
60	GO:0003712: transcription cofactor activity	8.97E-03
61	GO:0004190: aspartic-type endopeptidase activity	8.97E-03
62	GO:0005385: zinc ion transmembrane transporter activity	1.04E-02
63	GO:0004722: protein serine/threonine phosphatase activity	1.13E-02
64	GO:0015035: protein disulfide oxidoreductase activity	1.18E-02
65	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.19E-02
66	GO:0004540: ribonuclease activity	1.19E-02
67	GO:0008514: organic anion transmembrane transporter activity	1.43E-02
68	GO:0047134: protein-disulfide reductase activity	1.52E-02
69	GO:0046873: metal ion transmembrane transporter activity	1.69E-02
70	GO:0004791: thioredoxin-disulfide reductase activity	1.78E-02
71	GO:0004872: receptor activity	1.87E-02
72	GO:0003735: structural constituent of ribosome	1.90E-02
73	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.97E-02
74	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.16E-02
75	GO:0003684: damaged DNA binding	2.25E-02
76	GO:0000166: nucleotide binding	2.71E-02
77	GO:0008375: acetylglucosaminyltransferase activity	2.76E-02
78	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.09E-02
79	GO:0003729: mRNA binding	3.60E-02
80	GO:0003697: single-stranded DNA binding	3.65E-02
81	GO:0003993: acid phosphatase activity	3.77E-02
82	GO:0016757: transferase activity, transferring glycosyl groups	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0097361: CIA complex	0.00E+00
2	GO:0000502: proteasome complex	2.76E-45
3	GO:0005839: proteasome core complex	7.03E-31
4	GO:0019773: proteasome core complex, alpha-subunit complex	5.70E-18
5	GO:0005829: cytosol	8.00E-18
6	GO:0008541: proteasome regulatory particle, lid subcomplex	1.82E-09
7	GO:0005737: cytoplasm	1.41E-06
8	GO:0031595: nuclear proteasome complex	1.87E-06
9	GO:0005794: Golgi apparatus	1.07E-05
10	GO:0022626: cytosolic ribosome	6.41E-05
11	GO:0005783: endoplasmic reticulum	6.52E-05
12	GO:0005771: multivesicular body	6.98E-05
13	GO:0030904: retromer complex	6.98E-05
14	GO:0031597: cytosolic proteasome complex	9.69E-05
15	GO:0019774: proteasome core complex, beta-subunit complex	2.00E-04
16	GO:0008540: proteasome regulatory particle, base subcomplex	2.97E-04
17	GO:0005697: telomerase holoenzyme complex	4.48E-04
18	GO:0005838: proteasome regulatory particle	7.29E-04
19	GO:0042765: GPI-anchor transamidase complex	7.29E-04
20	GO:0005853: eukaryotic translation elongation factor 1 complex	7.29E-04
21	GO:0046861: glyoxysomal membrane	7.29E-04
22	GO:0005774: vacuolar membrane	7.59E-04
23	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.04E-03
24	GO:0016593: Cdc73/Paf1 complex	1.38E-03
25	GO:0005732: small nucleolar ribonucleoprotein complex	1.96E-03
26	GO:0005773: vacuole	2.28E-03
27	GO:0005634: nucleus	2.44E-03
28	GO:0005801: cis-Golgi network	2.60E-03
29	GO:0005802: trans-Golgi network	3.85E-03
30	GO:0046930: pore complex	4.06E-03
31	GO:0009514: glyoxysome	4.06E-03
32	GO:0005730: nucleolus	4.53E-03
33	GO:0005685: U1 snRNP	4.60E-03
34	GO:0008180: COP9 signalosome	4.60E-03
35	GO:0031902: late endosome membrane	5.48E-03
36	GO:0005665: DNA-directed RNA polymerase II, core complex	6.96E-03
37	GO:0009508: plastid chromosome	7.61E-03
38	GO:0005750: mitochondrial respiratory chain complex III	8.28E-03
39	GO:0022625: cytosolic large ribosomal subunit	8.55E-03
40	GO:0005681: spliceosomal complex	9.48E-03
41	GO:0005769: early endosome	9.68E-03
42	GO:0000419: DNA-directed RNA polymerase V complex	9.68E-03
43	GO:0005834: heterotrimeric G-protein complex	1.01E-02
44	GO:0005758: mitochondrial intermembrane space	1.04E-02
45	GO:0070469: respiratory chain	1.12E-02
46	GO:0005741: mitochondrial outer membrane	1.19E-02
47	GO:0005789: endoplasmic reticulum membrane	1.21E-02
48	GO:0005886: plasma membrane	1.37E-02
49	GO:0005768: endosome	1.71E-02
50	GO:0016592: mediator complex	2.06E-02
51	GO:0005840: ribosome	2.15E-02
52	GO:0032580: Golgi cisterna membrane	2.25E-02
53	GO:0009295: nucleoid	2.35E-02
54	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.36E-02
55	GO:0015934: large ribosomal subunit	3.42E-02
56	GO:0005819: spindle	3.89E-02
57	GO:0090406: pollen tube	4.37E-02
58	GO:0009506: plasmodesma	4.78E-02