co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G59970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010412: mannan metabolic process	0.00E+00
2	GO:0035437: maintenance of protein localization in endoplasmic reticulum	0.00E+00
3	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.20E-04
4	GO:0009828: plant-type cell wall loosening	2.57E-04
5	GO:0046345: abscisic acid catabolic process	3.14E-04
6	GO:0015689: molybdate ion transport	3.14E-04
7	GO:0046355: mannan catabolic process	3.14E-04
8	GO:0022622: root system development	3.14E-04
9	GO:0009823: cytokinin catabolic process	4.01E-04
10	GO:0006656: phosphatidylcholine biosynthetic process	4.01E-04
11	GO:0047484: regulation of response to osmotic stress	4.92E-04
12	GO:0016051: carbohydrate biosynthetic process	5.07E-04
13	GO:0010103: stomatal complex morphogenesis	6.87E-04
14	GO:0032880: regulation of protein localization	6.87E-04
15	GO:0030154: cell differentiation	7.03E-04
16	GO:0009690: cytokinin metabolic process	7.90E-04
17	GO:0035265: organ growth	7.90E-04
18	GO:0009664: plant-type cell wall organization	8.04E-04
19	GO:0043086: negative regulation of catalytic activity	1.01E-03
20	GO:0009641: shade avoidance	1.24E-03
21	GO:0006949: syncytium formation	1.24E-03
22	GO:2000012: regulation of auxin polar transport	1.62E-03
23	GO:0009826: unidimensional cell growth	3.01E-03
24	GO:0008284: positive regulation of cell proliferation	3.13E-03
25	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.13E-03
26	GO:0009958: positive gravitropism	3.47E-03
27	GO:0010268: brassinosteroid homeostasis	3.47E-03
28	GO:0045489: pectin biosynthetic process	3.47E-03
29	GO:0010183: pollen tube guidance	3.82E-03
30	GO:0016132: brassinosteroid biosynthetic process	4.00E-03
31	GO:0080156: mitochondrial mRNA modification	4.00E-03
32	GO:1901657: glycosyl compound metabolic process	4.37E-03
33	GO:0009639: response to red or far red light	4.56E-03
34	GO:0016125: sterol metabolic process	4.56E-03
35	GO:0019760: glucosinolate metabolic process	4.56E-03
36	GO:0006974: cellular response to DNA damage stimulus	5.55E-03
37	GO:0007568: aging	6.83E-03
38	GO:0048527: lateral root development	6.83E-03
39	GO:0009873: ethylene-activated signaling pathway	7.34E-03
40	GO:0006897: endocytosis	8.21E-03
41	GO:0008283: cell proliferation	8.68E-03
42	GO:0010114: response to red light	8.68E-03
43	GO:0006260: DNA replication	9.93E-03
44	GO:0009624: response to nematode	1.37E-02
45	GO:0009058: biosynthetic process	1.67E-02
46	GO:0009790: embryo development	1.80E-02
47	GO:0009414: response to water deprivation	2.00E-02
48	GO:0045490: pectin catabolic process	2.02E-02
49	GO:0071555: cell wall organization	2.05E-02
50	GO:0006979: response to oxidative stress	2.07E-02
51	GO:0009739: response to gibberellin	2.19E-02
52	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.19E-02
53	GO:0007166: cell surface receptor signaling pathway	2.23E-02
54	GO:0010468: regulation of gene expression	2.29E-02
55	GO:0005975: carbohydrate metabolic process	3.12E-02
56	GO:0080167: response to karrikin	3.22E-02
57	GO:0010200: response to chitin	3.30E-02
58	GO:0045892: negative regulation of transcription, DNA-templated	3.70E-02
59	GO:0007275: multicellular organism development	4.03E-02
60	GO:0009751: response to salicylic acid	4.20E-02

Rank	GO Term	Adjusted P value
1	GO:0004105: choline-phosphate cytidylyltransferase activity	3.64E-05
2	GO:0008083: growth factor activity	5.37E-05
3	GO:0047216: inositol 3-alpha-galactosyltransferase activity	9.09E-05
4	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	1.58E-04
5	GO:0046910: pectinesterase inhibitor activity	1.73E-04
6	GO:0016985: mannan endo-1,4-beta-mannosidase activity	3.14E-04
7	GO:0015098: molybdate ion transmembrane transporter activity	3.14E-04
8	GO:0019139: cytokinin dehydrogenase activity	4.01E-04
9	GO:0005543: phospholipid binding	1.36E-03
10	GO:0016758: transferase activity, transferring hexosyl groups	1.45E-03
11	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.76E-03
12	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.11E-03
13	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.64E-03
14	GO:0030570: pectate lyase activity	2.80E-03
15	GO:0016757: transferase activity, transferring glycosyl groups	3.90E-03
16	GO:0102483: scopolin beta-glucosidase activity	5.76E-03
17	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	6.83E-03
18	GO:0003993: acid phosphatase activity	7.51E-03
19	GO:0008422: beta-glucosidase activity	7.74E-03
20	GO:0003690: double-stranded DNA binding	1.10E-02
21	GO:0016829: lyase activity	1.70E-02
22	GO:0015144: carbohydrate transmembrane transporter activity	1.83E-02
23	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.92E-02
24	GO:0005351: sugar:proton symporter activity	1.99E-02
25	GO:0044212: transcription regulatory region DNA binding	2.05E-02
26	GO:0043565: sequence-specific DNA binding	2.86E-02
27	GO:0050660: flavin adenine dinucleotide binding	3.06E-02
28	GO:0061630: ubiquitin protein ligase activity	3.34E-02
29	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.66E-02
30	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.95E-02
31	GO:0004519: endonuclease activity	4.51E-02

Rank	GO Term	Adjusted P value
1	GO:0005615: extracellular space	2.28E-03
2	GO:0005905: clathrin-coated pit	2.48E-03
3	GO:0030136: clathrin-coated vesicle	3.13E-03
4	GO:0005576: extracellular region	4.29E-03
5	GO:0005618: cell wall	4.92E-03
6	GO:0005788: endoplasmic reticulum lumen	5.35E-03
7	GO:0016607: nuclear speck	1.23E-02
8	GO:0005623: cell	1.64E-02
9	GO:0046658: anchored component of plasma membrane	2.47E-02
10	GO:0005794: Golgi apparatus	4.66E-02