Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G59900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0005997: xylulose metabolic process0.00E+00
2GO:0098586: cellular response to virus0.00E+00
3GO:0017009: protein-phycocyanobilin linkage0.00E+00
4GO:0046741: transport of virus in host, tissue to tissue7.70E-06
5GO:0009853: photorespiration1.57E-05
6GO:0043572: plastid fission2.28E-05
7GO:0046653: tetrahydrofolate metabolic process2.28E-05
8GO:1900056: negative regulation of leaf senescence8.18E-05
9GO:0009396: folic acid-containing compound biosynthetic process8.18E-05
10GO:0044030: regulation of DNA methylation1.11E-04
11GO:0009658: chloroplast organization1.42E-04
12GO:0035999: tetrahydrofolate interconversion1.44E-04
13GO:0010380: regulation of chlorophyll biosynthetic process1.44E-04
14GO:0016485: protein processing1.78E-04
15GO:0010020: chloroplast fission2.33E-04
16GO:0051302: regulation of cell division3.11E-04
17GO:0006730: one-carbon metabolic process3.52E-04
18GO:0000302: response to reactive oxygen species5.27E-04
19GO:0015995: chlorophyll biosynthetic process7.44E-04
20GO:0010043: response to zinc ion8.71E-04
21GO:0007568: aging8.71E-04
22GO:0009910: negative regulation of flower development8.71E-04
23GO:0006508: proteolysis2.72E-03
24GO:0007049: cell cycle3.46E-03
25GO:0055114: oxidation-reduction process4.67E-03
26GO:0009408: response to heat4.84E-03
27GO:0051301: cell division7.64E-03
28GO:0045893: positive regulation of transcription, DNA-templated7.92E-03
29GO:0005975: carbohydrate metabolic process1.59E-02
30GO:0007275: multicellular organism development1.91E-02
31GO:0016310: phosphorylation2.23E-02
32GO:0006952: defense response4.01E-02
RankGO TermAdjusted P value
1GO:0004856: xylulokinase activity2.75E-06
2GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity7.70E-06
3GO:0004477: methenyltetrahydrofolate cyclohydrolase activity7.70E-06
4GO:0004046: aminoacylase activity7.70E-06
5GO:0004180: carboxypeptidase activity1.45E-05
6GO:0010277: chlorophyllide a oxygenase [overall] activity1.45E-05
7GO:0016773: phosphotransferase activity, alcohol group as acceptor4.33E-05
8GO:0004176: ATP-dependent peptidase activity3.32E-04
9GO:0016887: ATPase activity4.12E-04
10GO:0008080: N-acetyltransferase activity4.60E-04
11GO:0008237: metallopeptidase activity6.21E-04
12GO:0008236: serine-type peptidase activity7.68E-04
13GO:0004222: metalloendopeptidase activity8.45E-04
14GO:0051537: 2 iron, 2 sulfur cluster binding1.14E-03
15GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.96E-03
16GO:0016829: lyase activity2.03E-03
17GO:0005506: iron ion binding1.17E-02
18GO:0003824: catalytic activity1.26E-02
RankGO TermAdjusted P value
1GO:0009535: chloroplast thylakoid membrane1.68E-04
2GO:0009507: chloroplast3.10E-04
3GO:0042651: thylakoid membrane3.11E-04
4GO:0045271: respiratory chain complex I3.11E-04
5GO:0009532: plastid stroma3.32E-04
6GO:0009707: chloroplast outer membrane7.94E-04
7GO:0031966: mitochondrial membrane1.26E-03
8GO:0005747: mitochondrial respiratory chain complex I1.50E-03
9GO:0009706: chloroplast inner membrane1.66E-03
10GO:0009941: chloroplast envelope4.15E-03
11GO:0005773: vacuole4.68E-03
12GO:0009534: chloroplast thylakoid8.21E-03
13GO:0009570: chloroplast stroma4.52E-02
14GO:0005783: endoplasmic reticulum4.72E-02
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Gene type



Gene DE type