GO Enrichment Analysis of Co-expressed Genes with
AT1G58290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 3 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 4 | GO:0098586: cellular response to virus | 0.00E+00 |
| 5 | GO:0033231: carbohydrate export | 0.00E+00 |
| 6 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 7 | GO:0046677: response to antibiotic | 0.00E+00 |
| 8 | GO:0000256: allantoin catabolic process | 6.26E-08 |
| 9 | GO:0010136: ureide catabolic process | 2.43E-07 |
| 10 | GO:0006145: purine nucleobase catabolic process | 5.94E-07 |
| 11 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 3.09E-06 |
| 12 | GO:0007623: circadian rhythm | 5.69E-06 |
| 13 | GO:0009644: response to high light intensity | 2.47E-05 |
| 14 | GO:0015979: photosynthesis | 2.84E-05 |
| 15 | GO:0031426: polycistronic mRNA processing | 3.00E-05 |
| 16 | GO:1902334: fructose export from vacuole to cytoplasm | 3.00E-05 |
| 17 | GO:0010362: negative regulation of anion channel activity by blue light | 3.00E-05 |
| 18 | GO:0015755: fructose transport | 3.00E-05 |
| 19 | GO:0019646: aerobic electron transport chain | 3.00E-05 |
| 20 | GO:0080005: photosystem stoichiometry adjustment | 7.58E-05 |
| 21 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 7.58E-05 |
| 22 | GO:0016122: xanthophyll metabolic process | 7.58E-05 |
| 23 | GO:0046741: transport of virus in host, tissue to tissue | 7.58E-05 |
| 24 | GO:0009915: phloem sucrose loading | 7.58E-05 |
| 25 | GO:0042548: regulation of photosynthesis, light reaction | 7.58E-05 |
| 26 | GO:0006013: mannose metabolic process | 1.32E-04 |
| 27 | GO:0043572: plastid fission | 1.97E-04 |
| 28 | GO:0071484: cellular response to light intensity | 1.97E-04 |
| 29 | GO:0010239: chloroplast mRNA processing | 1.97E-04 |
| 30 | GO:0006021: inositol biosynthetic process | 2.67E-04 |
| 31 | GO:0009902: chloroplast relocation | 2.67E-04 |
| 32 | GO:0015994: chlorophyll metabolic process | 2.67E-04 |
| 33 | GO:0015995: chlorophyll biosynthetic process | 2.85E-04 |
| 34 | GO:0018298: protein-chromophore linkage | 3.16E-04 |
| 35 | GO:0010117: photoprotection | 3.42E-04 |
| 36 | GO:0010190: cytochrome b6f complex assembly | 4.20E-04 |
| 37 | GO:0009643: photosynthetic acclimation | 4.20E-04 |
| 38 | GO:0046855: inositol phosphate dephosphorylation | 4.20E-04 |
| 39 | GO:0042372: phylloquinone biosynthetic process | 5.02E-04 |
| 40 | GO:0010189: vitamin E biosynthetic process | 5.02E-04 |
| 41 | GO:0071482: cellular response to light stimulus | 7.68E-04 |
| 42 | GO:0009657: plastid organization | 7.68E-04 |
| 43 | GO:0006754: ATP biosynthetic process | 8.63E-04 |
| 44 | GO:0048507: meristem development | 8.63E-04 |
| 45 | GO:0009638: phototropism | 9.61E-04 |
| 46 | GO:0006259: DNA metabolic process | 1.06E-03 |
| 47 | GO:0006995: cellular response to nitrogen starvation | 1.06E-03 |
| 48 | GO:0006265: DNA topological change | 1.16E-03 |
| 49 | GO:0009750: response to fructose | 1.16E-03 |
| 50 | GO:0009773: photosynthetic electron transport in photosystem I | 1.16E-03 |
| 51 | GO:0006790: sulfur compound metabolic process | 1.27E-03 |
| 52 | GO:0005986: sucrose biosynthetic process | 1.38E-03 |
| 53 | GO:0009266: response to temperature stimulus | 1.50E-03 |
| 54 | GO:0010020: chloroplast fission | 1.50E-03 |
| 55 | GO:0019853: L-ascorbic acid biosynthetic process | 1.61E-03 |
| 56 | GO:0046854: phosphatidylinositol phosphorylation | 1.61E-03 |
| 57 | GO:0010468: regulation of gene expression | 1.91E-03 |
| 58 | GO:0051302: regulation of cell division | 1.98E-03 |
| 59 | GO:0008299: isoprenoid biosynthetic process | 1.98E-03 |
| 60 | GO:0051260: protein homooligomerization | 2.11E-03 |
| 61 | GO:0009658: chloroplast organization | 2.46E-03 |
| 62 | GO:0055114: oxidation-reduction process | 2.58E-03 |
| 63 | GO:0070417: cellular response to cold | 2.66E-03 |
| 64 | GO:0010118: stomatal movement | 2.80E-03 |
| 65 | GO:0006662: glycerol ether metabolic process | 2.94E-03 |
| 66 | GO:0007059: chromosome segregation | 3.09E-03 |
| 67 | GO:0009646: response to absence of light | 3.09E-03 |
| 68 | GO:0009791: post-embryonic development | 3.24E-03 |
| 69 | GO:0046777: protein autophosphorylation | 3.25E-03 |
| 70 | GO:0000302: response to reactive oxygen species | 3.40E-03 |
| 71 | GO:0045454: cell redox homeostasis | 3.63E-03 |
| 72 | GO:0046686: response to cadmium ion | 4.65E-03 |
| 73 | GO:0000160: phosphorelay signal transduction system | 5.41E-03 |
| 74 | GO:0009637: response to blue light | 6.16E-03 |
| 75 | GO:0034599: cellular response to oxidative stress | 6.35E-03 |
| 76 | GO:0006631: fatty acid metabolic process | 6.94E-03 |
| 77 | GO:0009735: response to cytokinin | 7.23E-03 |
| 78 | GO:0010114: response to red light | 7.34E-03 |
| 79 | GO:0031347: regulation of defense response | 8.38E-03 |
| 80 | GO:0006364: rRNA processing | 9.03E-03 |
| 81 | GO:0006417: regulation of translation | 9.70E-03 |
| 82 | GO:0006457: protein folding | 1.02E-02 |
| 83 | GO:0009624: response to nematode | 1.16E-02 |
| 84 | GO:0006396: RNA processing | 1.18E-02 |
| 85 | GO:0009409: response to cold | 2.18E-02 |
| 86 | GO:0042254: ribosome biogenesis | 2.36E-02 |
| 87 | GO:0007049: cell cycle | 2.51E-02 |
| 88 | GO:0080167: response to karrikin | 2.71E-02 |
| 89 | GO:0009408: response to heat | 3.58E-02 |
| 90 | GO:0006281: DNA repair | 3.58E-02 |
| 91 | GO:0006397: mRNA processing | 3.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | 0.00E+00 |
| 2 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 3 | GO:0015284: fructose uniporter activity | 0.00E+00 |
| 4 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 5 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 6 | GO:0009976: tocopherol cyclase activity | 0.00E+00 |
| 7 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 8 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 3.00E-05 |
| 9 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 3.00E-05 |
| 10 | GO:0035671: enone reductase activity | 3.00E-05 |
| 11 | GO:0005353: fructose transmembrane transporter activity | 7.58E-05 |
| 12 | GO:0052832: inositol monophosphate 3-phosphatase activity | 7.58E-05 |
| 13 | GO:0008934: inositol monophosphate 1-phosphatase activity | 7.58E-05 |
| 14 | GO:0052833: inositol monophosphate 4-phosphatase activity | 7.58E-05 |
| 15 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 1.32E-04 |
| 16 | GO:0050307: sucrose-phosphate phosphatase activity | 1.32E-04 |
| 17 | GO:0070402: NADPH binding | 1.32E-04 |
| 18 | GO:0003913: DNA photolyase activity | 1.32E-04 |
| 19 | GO:0008253: 5'-nucleotidase activity | 1.32E-04 |
| 20 | GO:0004848: ureidoglycolate hydrolase activity | 1.32E-04 |
| 21 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.32E-04 |
| 22 | GO:0016853: isomerase activity | 1.41E-04 |
| 23 | GO:0009882: blue light photoreceptor activity | 1.97E-04 |
| 24 | GO:0048027: mRNA 5'-UTR binding | 1.97E-04 |
| 25 | GO:0016851: magnesium chelatase activity | 1.97E-04 |
| 26 | GO:0051538: 3 iron, 4 sulfur cluster binding | 3.42E-04 |
| 27 | GO:0046872: metal ion binding | 3.51E-04 |
| 28 | GO:0004559: alpha-mannosidase activity | 5.02E-04 |
| 29 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 5.02E-04 |
| 30 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 7.68E-04 |
| 31 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 8.63E-04 |
| 32 | GO:0016887: ATPase activity | 9.32E-04 |
| 33 | GO:0031072: heat shock protein binding | 1.38E-03 |
| 34 | GO:0000155: phosphorelay sensor kinase activity | 1.38E-03 |
| 35 | GO:0051119: sugar transmembrane transporter activity | 1.61E-03 |
| 36 | GO:0003954: NADH dehydrogenase activity | 1.86E-03 |
| 37 | GO:0022891: substrate-specific transmembrane transporter activity | 2.38E-03 |
| 38 | GO:0003727: single-stranded RNA binding | 2.52E-03 |
| 39 | GO:0047134: protein-disulfide reductase activity | 2.66E-03 |
| 40 | GO:0005524: ATP binding | 3.04E-03 |
| 41 | GO:0004791: thioredoxin-disulfide reductase activity | 3.09E-03 |
| 42 | GO:0010181: FMN binding | 3.09E-03 |
| 43 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.71E-03 |
| 44 | GO:0008237: metallopeptidase activity | 4.03E-03 |
| 45 | GO:0016168: chlorophyll binding | 4.53E-03 |
| 46 | GO:0050897: cobalt ion binding | 5.78E-03 |
| 47 | GO:0030145: manganese ion binding | 5.78E-03 |
| 48 | GO:0043621: protein self-association | 7.75E-03 |
| 49 | GO:0051082: unfolded protein binding | 1.16E-02 |
| 50 | GO:0015035: protein disulfide oxidoreductase activity | 1.18E-02 |
| 51 | GO:0016829: lyase activity | 1.43E-02 |
| 52 | GO:0042802: identical protein binding | 2.02E-02 |
| 53 | GO:0000287: magnesium ion binding | 2.29E-02 |
| 54 | GO:0050660: flavin adenine dinucleotide binding | 2.58E-02 |
| 55 | GO:0009055: electron carrier activity | 3.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.09E-13 |
| 2 | GO:0009534: chloroplast thylakoid | 8.06E-10 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 7.88E-09 |
| 4 | GO:0009570: chloroplast stroma | 6.92E-05 |
| 5 | GO:0031304: intrinsic component of mitochondrial inner membrane | 7.58E-05 |
| 6 | GO:0010287: plastoglobule | 7.83E-05 |
| 7 | GO:0010007: magnesium chelatase complex | 1.32E-04 |
| 8 | GO:0009941: chloroplast envelope | 1.92E-04 |
| 9 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 2.67E-04 |
| 10 | GO:0031977: thylakoid lumen | 4.74E-04 |
| 11 | GO:0042644: chloroplast nucleoid | 8.63E-04 |
| 12 | GO:0009706: chloroplast inner membrane | 9.54E-04 |
| 13 | GO:0042651: thylakoid membrane | 1.98E-03 |
| 14 | GO:0009654: photosystem II oxygen evolving complex | 1.98E-03 |
| 15 | GO:0009523: photosystem II | 3.24E-03 |
| 16 | GO:0019898: extrinsic component of membrane | 3.24E-03 |
| 17 | GO:0010319: stromule | 4.03E-03 |
| 18 | GO:0009295: nucleoid | 4.03E-03 |
| 19 | GO:0009707: chloroplast outer membrane | 5.23E-03 |
| 20 | GO:0009579: thylakoid | 9.46E-03 |
| 21 | GO:0005747: mitochondrial respiratory chain complex I | 1.04E-02 |
| 22 | GO:0009543: chloroplast thylakoid lumen | 1.36E-02 |
| 23 | GO:0048046: apoplast | 1.37E-02 |
| 24 | GO:0005623: cell | 1.38E-02 |
| 25 | GO:0005618: cell wall | 1.52E-02 |
| 26 | GO:0005759: mitochondrial matrix | 1.59E-02 |
| 27 | GO:0009705: plant-type vacuole membrane | 1.70E-02 |
| 28 | GO:0031969: chloroplast membrane | 2.71E-02 |
| 29 | GO:0005743: mitochondrial inner membrane | 3.40E-02 |