co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G58180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006593: ornithine catabolic process	0.00E+00
2	GO:0032780: negative regulation of ATPase activity	0.00E+00
3	GO:0006721: terpenoid metabolic process	0.00E+00
4	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
5	GO:0045740: positive regulation of DNA replication	0.00E+00
6	GO:0048870: cell motility	0.00E+00
7	GO:0009963: positive regulation of flavonoid biosynthetic process	1.41E-05
8	GO:0048527: lateral root development	3.45E-05
9	GO:0006012: galactose metabolic process	7.01E-05
10	GO:0050790: regulation of catalytic activity	1.15E-04
11	GO:0006567: threonine catabolic process	1.86E-04
12	GO:0016487: farnesol metabolic process	1.86E-04
13	GO:0031539: positive regulation of anthocyanin metabolic process	1.86E-04
14	GO:0031468: nuclear envelope reassembly	1.86E-04
15	GO:0019544: arginine catabolic process to glutamate	1.86E-04
16	GO:0005975: carbohydrate metabolic process	2.33E-04
17	GO:0030010: establishment of cell polarity	4.19E-04
18	GO:0007163: establishment or maintenance of cell polarity	4.19E-04
19	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	4.19E-04
20	GO:0019441: tryptophan catabolic process to kynurenine	4.19E-04
21	GO:0006108: malate metabolic process	4.78E-04
22	GO:0009853: photorespiration	5.00E-04
23	GO:0010039: response to iron ion	6.03E-04
24	GO:0034976: response to endoplasmic reticulum stress	6.69E-04
25	GO:0008333: endosome to lysosome transport	6.84E-04
26	GO:0051646: mitochondrion localization	6.84E-04
27	GO:0043617: cellular response to sucrose starvation	6.84E-04
28	GO:0015940: pantothenate biosynthetic process	6.84E-04
29	GO:0045793: positive regulation of cell size	6.84E-04
30	GO:0006760: folic acid-containing compound metabolic process	6.84E-04
31	GO:0006107: oxaloacetate metabolic process	9.77E-04
32	GO:0006516: glycoprotein catabolic process	9.77E-04
33	GO:0009647: skotomorphogenesis	9.77E-04
34	GO:1901332: negative regulation of lateral root development	9.77E-04
35	GO:0032877: positive regulation of DNA endoreduplication	9.77E-04
36	GO:0071249: cellular response to nitrate	1.29E-03
37	GO:0006221: pyrimidine nucleotide biosynthetic process	1.29E-03
38	GO:0009649: entrainment of circadian clock	1.29E-03
39	GO:0006749: glutathione metabolic process	1.29E-03
40	GO:0032366: intracellular sterol transport	1.29E-03
41	GO:0044205: 'de novo' UMP biosynthetic process	1.29E-03
42	GO:0034613: cellular protein localization	1.29E-03
43	GO:0006646: phosphatidylethanolamine biosynthetic process	1.29E-03
44	GO:0006545: glycine biosynthetic process	1.29E-03
45	GO:0051781: positive regulation of cell division	1.29E-03
46	GO:0018344: protein geranylgeranylation	1.65E-03
47	GO:0030041: actin filament polymerization	1.65E-03
48	GO:0046283: anthocyanin-containing compound metabolic process	1.65E-03
49	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.65E-03
50	GO:0006555: methionine metabolic process	2.03E-03
51	GO:0042732: D-xylose metabolic process	2.03E-03
52	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	2.03E-03
53	GO:0034314: Arp2/3 complex-mediated actin nucleation	2.03E-03
54	GO:0006796: phosphate-containing compound metabolic process	2.03E-03
55	GO:0003006: developmental process involved in reproduction	2.03E-03
56	GO:0006014: D-ribose metabolic process	2.03E-03
57	GO:0006561: proline biosynthetic process	2.03E-03
58	GO:0016042: lipid catabolic process	2.39E-03
59	GO:0019509: L-methionine salvage from methylthioadenosine	2.43E-03
60	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	2.43E-03
61	GO:0007050: cell cycle arrest	2.87E-03
62	GO:0009396: folic acid-containing compound biosynthetic process	2.87E-03
63	GO:0000082: G1/S transition of mitotic cell cycle	2.87E-03
64	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	2.87E-03
65	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.32E-03
66	GO:0009850: auxin metabolic process	3.32E-03
67	GO:0032875: regulation of DNA endoreduplication	3.32E-03
68	GO:0000028: ribosomal small subunit assembly	3.32E-03
69	GO:0045010: actin nucleation	3.32E-03
70	GO:0010311: lateral root formation	3.47E-03
71	GO:0009407: toxin catabolic process	3.64E-03
72	GO:0010099: regulation of photomorphogenesis	3.80E-03
73	GO:0009880: embryonic pattern specification	3.80E-03
74	GO:0006098: pentose-phosphate shunt	4.30E-03
75	GO:0000902: cell morphogenesis	4.30E-03
76	GO:0006099: tricarboxylic acid cycle	4.37E-03
77	GO:0035999: tetrahydrofolate interconversion	4.82E-03
78	GO:0042761: very long-chain fatty acid biosynthetic process	4.82E-03
79	GO:0009641: shade avoidance	5.36E-03
80	GO:0009640: photomorphogenesis	5.39E-03
81	GO:0010015: root morphogenesis	5.92E-03
82	GO:0052544: defense response by callose deposition in cell wall	5.92E-03
83	GO:0030148: sphingolipid biosynthetic process	5.92E-03
84	GO:0006378: mRNA polyadenylation	5.92E-03
85	GO:0009636: response to toxic substance	6.06E-03
86	GO:0035556: intracellular signal transduction	6.47E-03
87	GO:0010152: pollen maturation	6.51E-03
88	GO:0010102: lateral root morphogenesis	7.11E-03
89	GO:0006807: nitrogen compound metabolic process	7.11E-03
90	GO:0009691: cytokinin biosynthetic process	7.11E-03
91	GO:0006006: glucose metabolic process	7.11E-03
92	GO:0050826: response to freezing	7.11E-03
93	GO:0009585: red, far-red light phototransduction	7.26E-03
94	GO:0051603: proteolysis involved in cellular protein catabolic process	7.51E-03
95	GO:0010224: response to UV-B	7.51E-03
96	GO:0002237: response to molecule of bacterial origin	7.73E-03
97	GO:0007015: actin filament organization	7.73E-03
98	GO:0007030: Golgi organization	8.37E-03
99	GO:0019853: L-ascorbic acid biosynthetic process	8.37E-03
100	GO:0045454: cell redox homeostasis	8.89E-03
101	GO:0042753: positive regulation of circadian rhythm	9.03E-03
102	GO:2000377: regulation of reactive oxygen species metabolic process	9.71E-03
103	GO:0019915: lipid storage	1.11E-02
104	GO:0061077: chaperone-mediated protein folding	1.11E-02
105	GO:0006366: transcription from RNA polymerase II promoter	1.11E-02
106	GO:0010431: seed maturation	1.11E-02
107	GO:0010017: red or far-red light signaling pathway	1.19E-02
108	GO:0016226: iron-sulfur cluster assembly	1.19E-02
109	GO:0048443: stamen development	1.34E-02
110	GO:0042147: retrograde transport, endosome to Golgi	1.42E-02
111	GO:0042391: regulation of membrane potential	1.50E-02
112	GO:0080022: primary root development	1.50E-02
113	GO:0010268: brassinosteroid homeostasis	1.58E-02
114	GO:0009958: positive gravitropism	1.58E-02
115	GO:0006520: cellular amino acid metabolic process	1.58E-02
116	GO:0055114: oxidation-reduction process	1.62E-02
117	GO:0009646: response to absence of light	1.66E-02
118	GO:0015986: ATP synthesis coupled proton transport	1.66E-02
119	GO:0061025: membrane fusion	1.66E-02
120	GO:0008654: phospholipid biosynthetic process	1.75E-02
121	GO:0055072: iron ion homeostasis	1.75E-02
122	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.83E-02
123	GO:0016132: brassinosteroid biosynthetic process	1.83E-02
124	GO:0010090: trichome morphogenesis	2.01E-02
125	GO:1901657: glycosyl compound metabolic process	2.01E-02
126	GO:0016125: sterol metabolic process	2.10E-02
127	GO:0000910: cytokinesis	2.29E-02
128	GO:0016126: sterol biosynthetic process	2.38E-02
129	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.48E-02
130	GO:0009816: defense response to bacterium, incompatible interaction	2.48E-02
131	GO:0048573: photoperiodism, flowering	2.67E-02
132	GO:0009826: unidimensional cell growth	2.68E-02
133	GO:0006811: ion transport	3.08E-02
134	GO:0010218: response to far red light	3.08E-02
135	GO:0010119: regulation of stomatal movement	3.19E-02
136	GO:0010043: response to zinc ion	3.19E-02
137	GO:0080167: response to karrikin	3.44E-02
138	GO:0009651: response to salt stress	3.86E-02
139	GO:0010114: response to red light	4.08E-02
140	GO:0009744: response to sucrose	4.08E-02
141	GO:0042538: hyperosmotic salinity response	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
2	GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity	0.00E+00
3	GO:0009045: xylose isomerase activity	0.00E+00
4	GO:0050152: omega-amidase activity	0.00E+00
5	GO:0004151: dihydroorotase activity	0.00E+00
6	GO:0003826: alpha-ketoacid dehydrogenase activity	0.00E+00
7	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
8	GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity	0.00E+00
9	GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity	0.00E+00
10	GO:0047886: farnesol dehydrogenase activity	0.00E+00
11	GO:0004147: dihydrolipoamide branched chain acyltransferase activity	0.00E+00
12	GO:0042030: ATPase inhibitor activity	0.00E+00
13	GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
14	GO:0043754: dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity	0.00E+00
15	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
16	GO:0004034: aldose 1-epimerase activity	2.41E-06
17	GO:0016788: hydrolase activity, acting on ester bonds	1.89E-05
18	GO:0010011: auxin binding	2.61E-05
19	GO:0046480: galactolipid galactosyltransferase activity	1.86E-04
20	GO:0080079: cellobiose glucosidase activity	1.86E-04
21	GO:0004560: alpha-L-fucosidase activity	1.86E-04
22	GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity	1.86E-04
23	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	1.86E-04
24	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	1.86E-04
25	GO:0080047: GDP-L-galactose phosphorylase activity	1.86E-04
26	GO:0004793: threonine aldolase activity	1.86E-04
27	GO:0047560: 3-dehydrosphinganine reductase activity	1.86E-04
28	GO:0004307: ethanolaminephosphotransferase activity	1.86E-04
29	GO:0019707: protein-cysteine S-acyltransferase activity	1.86E-04
30	GO:0008732: L-allo-threonine aldolase activity	1.86E-04
31	GO:0080048: GDP-D-glucose phosphorylase activity	1.86E-04
32	GO:0010179: IAA-Ala conjugate hydrolase activity	1.86E-04
33	GO:0047617: acyl-CoA hydrolase activity	2.69E-04
34	GO:0030572: phosphatidyltransferase activity	4.19E-04
35	GO:0004142: diacylglycerol cholinephosphotransferase activity	4.19E-04
36	GO:1990585: hydroxyproline O-arabinosyltransferase activity	4.19E-04
37	GO:0004061: arylformamidase activity	4.19E-04
38	GO:0051980: iron-nicotianamine transmembrane transporter activity	4.19E-04
39	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	6.84E-04
40	GO:0005047: signal recognition particle binding	6.84E-04
41	GO:0004557: alpha-galactosidase activity	6.84E-04
42	GO:0004663: Rab geranylgeranyltransferase activity	6.84E-04
43	GO:0032403: protein complex binding	6.84E-04
44	GO:0052692: raffinose alpha-galactosidase activity	6.84E-04
45	GO:0043130: ubiquitin binding	7.41E-04
46	GO:0000254: C-4 methylsterol oxidase activity	9.77E-04
47	GO:0010178: IAA-amino acid conjugate hydrolase activity	9.77E-04
48	GO:0016656: monodehydroascorbate reductase (NADH) activity	9.77E-04
49	GO:0003756: protein disulfide isomerase activity	1.15E-03
50	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.29E-03
51	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.29E-03
52	GO:0016853: isomerase activity	1.54E-03
53	GO:0052689: carboxylic ester hydrolase activity	1.60E-03
54	GO:0016407: acetyltransferase activity	1.65E-03
55	GO:0008198: ferrous iron binding	1.65E-03
56	GO:0005496: steroid binding	1.65E-03
57	GO:0004197: cysteine-type endopeptidase activity	1.89E-03
58	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	2.03E-03
59	GO:0051117: ATPase binding	2.03E-03
60	GO:0016615: malate dehydrogenase activity	2.03E-03
61	GO:0080046: quercetin 4'-O-glucosyltransferase activity	2.03E-03
62	GO:0070300: phosphatidic acid binding	2.43E-03
63	GO:0004747: ribokinase activity	2.43E-03
64	GO:0030060: L-malate dehydrogenase activity	2.43E-03
65	GO:0005261: cation channel activity	2.43E-03
66	GO:0004427: inorganic diphosphatase activity	2.87E-03
67	GO:0008143: poly(A) binding	2.87E-03
68	GO:0005085: guanyl-nucleotide exchange factor activity	2.87E-03
69	GO:0035064: methylated histone binding	3.32E-03
70	GO:0050897: cobalt ion binding	3.82E-03
71	GO:0042802: identical protein binding	4.19E-03
72	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	4.30E-03
73	GO:0004364: glutathione transferase activity	5.18E-03
74	GO:0004129: cytochrome-c oxidase activity	5.92E-03
75	GO:0008794: arsenate reductase (glutaredoxin) activity	5.92E-03
76	GO:0008378: galactosyltransferase activity	6.51E-03
77	GO:0015198: oligopeptide transporter activity	6.51E-03
78	GO:0016298: lipase activity	7.51E-03
79	GO:0008234: cysteine-type peptidase activity	8.04E-03
80	GO:0030553: cGMP binding	8.37E-03
81	GO:0030552: cAMP binding	8.37E-03
82	GO:0005528: FK506 binding	9.71E-03
83	GO:0001046: core promoter sequence-specific DNA binding	9.71E-03
84	GO:0022857: transmembrane transporter activity	9.74E-03
85	GO:0005216: ion channel activity	1.04E-02
86	GO:0030551: cyclic nucleotide binding	1.50E-02
87	GO:0005249: voltage-gated potassium channel activity	1.50E-02
88	GO:0008080: N-acetyltransferase activity	1.58E-02
89	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.58E-02
90	GO:0050662: coenzyme binding	1.66E-02
91	GO:0004872: receptor activity	1.75E-02
92	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.83E-02
93	GO:0003824: catalytic activity	1.99E-02
94	GO:0051015: actin filament binding	2.01E-02
95	GO:0008237: metallopeptidase activity	2.19E-02
96	GO:0016597: amino acid binding	2.29E-02
97	GO:0051213: dioxygenase activity	2.38E-02
98	GO:0008236: serine-type peptidase activity	2.78E-02
99	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.08E-02
100	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.19E-02
101	GO:0050660: flavin adenine dinucleotide binding	3.22E-02
102	GO:0030246: carbohydrate binding	3.47E-02
103	GO:0008422: beta-glucosidase activity	3.63E-02
104	GO:0051539: 4 iron, 4 sulfur cluster binding	3.74E-02
105	GO:0004185: serine-type carboxypeptidase activity	4.08E-02
106	GO:0043621: protein self-association	4.31E-02
107	GO:0051537: 2 iron, 2 sulfur cluster binding	4.31E-02
108	GO:0005198: structural molecule activity	4.43E-02
109	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0005747: mitochondrial respiratory chain complex I	1.28E-05
2	GO:0005764: lysosome	2.27E-05
3	GO:0005759: mitochondrial matrix	5.33E-05
4	GO:0005829: cytosol	8.18E-05
5	GO:0000152: nuclear ubiquitin ligase complex	1.86E-04
6	GO:0005773: vacuole	6.19E-04
7	GO:0005838: proteasome regulatory particle	6.84E-04
8	GO:0045271: respiratory chain complex I	8.15E-04
9	GO:0005849: mRNA cleavage factor complex	9.77E-04
10	GO:0005968: Rab-protein geranylgeranyltransferase complex	9.77E-04
11	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.29E-03
12	GO:0005783: endoplasmic reticulum	1.32E-03
13	GO:0030904: retromer complex	2.03E-03
14	GO:0031463: Cul3-RING ubiquitin ligase complex	2.03E-03
15	GO:0031209: SCAR complex	2.03E-03
16	GO:0005771: multivesicular body	2.03E-03
17	GO:0005801: cis-Golgi network	2.43E-03
18	GO:0005885: Arp2/3 protein complex	2.43E-03
19	GO:0005788: endoplasmic reticulum lumen	2.69E-03
20	GO:0031359: integral component of chloroplast outer membrane	2.87E-03
21	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3.32E-03
22	GO:0045273: respiratory chain complex II	3.32E-03
23	GO:0005763: mitochondrial small ribosomal subunit	4.30E-03
24	GO:0016604: nuclear body	4.82E-03
25	GO:0005774: vacuolar membrane	5.25E-03
26	GO:0031966: mitochondrial membrane	6.76E-03
27	GO:0005753: mitochondrial proton-transporting ATP synthase complex	8.37E-03
28	GO:0005615: extracellular space	2.01E-02
29	GO:0071944: cell periphery	2.01E-02
30	GO:0005778: peroxisomal membrane	2.19E-02
31	GO:0005737: cytoplasm	2.77E-02
32	GO:0009707: chloroplast outer membrane	2.88E-02
33	GO:0031902: late endosome membrane	3.85E-02
34	GO:0005856: cytoskeleton	4.43E-02