co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G58080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0017009: protein-phycocyanobilin linkage	0.00E+00
2	GO:0051246: regulation of protein metabolic process	0.00E+00
3	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
4	GO:0098586: cellular response to virus	0.00E+00
5	GO:0080005: photosystem stoichiometry adjustment	2.80E-08
6	GO:0018298: protein-chromophore linkage	3.47E-06
7	GO:0009657: plastid organization	5.18E-06
8	GO:0015979: photosynthesis	8.37E-06
9	GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.87E-05
10	GO:1904966: positive regulation of vitamin E biosynthetic process	1.87E-05
11	GO:1904964: positive regulation of phytol biosynthetic process	1.87E-05
12	GO:0042371: vitamin K biosynthetic process	1.87E-05
13	GO:0071461: cellular response to redox state	1.87E-05
14	GO:0006436: tryptophanyl-tRNA aminoacylation	1.87E-05
15	GO:0010362: negative regulation of anion channel activity by blue light	1.87E-05
16	GO:1902326: positive regulation of chlorophyll biosynthetic process	4.85E-05
17	GO:0000256: allantoin catabolic process	4.85E-05
18	GO:0080183: response to photooxidative stress	4.85E-05
19	GO:0046741: transport of virus in host, tissue to tissue	4.85E-05
20	GO:0016117: carotenoid biosynthetic process	5.66E-05
21	GO:0006013: mannose metabolic process	8.61E-05
22	GO:0010136: ureide catabolic process	8.61E-05
23	GO:0006696: ergosterol biosynthetic process	8.61E-05
24	GO:0006809: nitric oxide biosynthetic process	1.30E-04
25	GO:0006145: purine nucleobase catabolic process	1.30E-04
26	GO:0043572: plastid fission	1.30E-04
27	GO:2001141: regulation of RNA biosynthetic process	1.30E-04
28	GO:0009902: chloroplast relocation	1.78E-04
29	GO:0009765: photosynthesis, light harvesting	1.78E-04
30	GO:0016120: carotene biosynthetic process	2.30E-04
31	GO:0016123: xanthophyll biosynthetic process	2.30E-04
32	GO:0010190: cytochrome b6f complex assembly	2.85E-04
33	GO:0048564: photosystem I assembly	4.64E-04
34	GO:0009735: response to cytokinin	4.71E-04
35	GO:0071482: cellular response to light stimulus	5.27E-04
36	GO:0009638: phototropism	6.61E-04
37	GO:0045036: protein targeting to chloroplast	7.30E-04
38	GO:0006259: DNA metabolic process	7.30E-04
39	GO:0006265: DNA topological change	8.02E-04
40	GO:0006352: DNA-templated transcription, initiation	8.02E-04
41	GO:0007623: circadian rhythm	9.17E-04
42	GO:0005986: sucrose biosynthetic process	9.49E-04
43	GO:0010020: chloroplast fission	1.02E-03
44	GO:0010207: photosystem II assembly	1.02E-03
45	GO:0006418: tRNA aminoacylation for protein translation	1.35E-03
46	GO:0051302: regulation of cell division	1.35E-03
47	GO:0009658: chloroplast organization	1.39E-03
48	GO:0046777: protein autophosphorylation	1.83E-03
49	GO:0010118: stomatal movement	1.89E-03
50	GO:0007059: chromosome segregation	2.09E-03
51	GO:0009791: post-embryonic development	2.19E-03
52	GO:0010193: response to ozone	2.29E-03
53	GO:0000302: response to reactive oxygen species	2.29E-03
54	GO:0010286: heat acclimation	2.72E-03
55	GO:0010027: thylakoid membrane organization	2.94E-03
56	GO:0009816: defense response to bacterium, incompatible interaction	3.05E-03
57	GO:0015995: chlorophyll biosynthetic process	3.28E-03
58	GO:0048481: plant ovule development	3.51E-03
59	GO:0000160: phosphorelay signal transduction system	3.63E-03
60	GO:0007568: aging	3.88E-03
61	GO:0009637: response to blue light	4.13E-03
62	GO:0010114: response to red light	4.91E-03
63	GO:0009744: response to sucrose	4.91E-03
64	GO:0009644: response to high light intensity	5.18E-03
65	GO:0055085: transmembrane transport	5.58E-03
66	GO:0042538: hyperosmotic salinity response	5.74E-03
67	GO:0006417: regulation of translation	6.46E-03
68	GO:0006396: RNA processing	7.85E-03
69	GO:0010228: vegetative to reproductive phase transition of meristem	1.16E-02
70	GO:0010468: regulation of gene expression	1.28E-02
71	GO:0046686: response to cadmium ion	1.39E-02
72	GO:0007049: cell cycle	1.66E-02
73	GO:0048366: leaf development	1.72E-02
74	GO:0006397: mRNA processing	2.43E-02
75	GO:0008152: metabolic process	2.53E-02
76	GO:0055114: oxidation-reduction process	2.96E-02
77	GO:0009416: response to light stimulus	3.55E-02
78	GO:0035556: intracellular signal transduction	3.69E-02
79	GO:0051301: cell division	3.78E-02
80	GO:0006457: protein folding	4.27E-02

Rank	GO Term	Adjusted P value
1	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
2	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
3	GO:0046905: phytoene synthase activity	0.00E+00
4	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
5	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
6	GO:0051996: squalene synthase activity	1.87E-05
7	GO:0004830: tryptophan-tRNA ligase activity	1.87E-05
8	GO:0030941: chloroplast targeting sequence binding	1.87E-05
9	GO:0022891: substrate-specific transmembrane transporter activity	4.67E-05
10	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	4.85E-05
11	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	8.61E-05
12	GO:0050307: sucrose-phosphate phosphatase activity	8.61E-05
13	GO:0004180: carboxypeptidase activity	8.61E-05
14	GO:0016851: magnesium chelatase activity	1.30E-04
15	GO:0009882: blue light photoreceptor activity	1.30E-04
16	GO:0016168: chlorophyll binding	1.37E-04
17	GO:0043495: protein anchor	1.78E-04
18	GO:0001053: plastid sigma factor activity	1.78E-04
19	GO:0051861: glycolipid binding	1.78E-04
20	GO:0016987: sigma factor activity	1.78E-04
21	GO:0004559: alpha-mannosidase activity	3.42E-04
22	GO:0019899: enzyme binding	4.02E-04
23	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	5.27E-04
24	GO:0000155: phosphorelay sensor kinase activity	9.49E-04
25	GO:0042802: identical protein binding	1.15E-03
26	GO:0003727: single-stranded RNA binding	1.70E-03
27	GO:0004812: aminoacyl-tRNA ligase activity	1.80E-03
28	GO:0010181: FMN binding	2.09E-03
29	GO:0048038: quinone binding	2.29E-03
30	GO:0016597: amino acid binding	2.82E-03
31	GO:0008236: serine-type peptidase activity	3.40E-03
32	GO:0043621: protein self-association	5.18E-03
33	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	6.02E-03
34	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	9.16E-03
35	GO:0016829: lyase activity	9.51E-03
36	GO:0000287: magnesium ion binding	1.52E-02
37	GO:0003924: GTPase activity	2.36E-02
38	GO:0005515: protein binding	3.00E-02
39	GO:0016887: ATPase activity	3.23E-02
40	GO:0030246: carbohydrate binding	4.39E-02
41	GO:0005524: ATP binding	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.92E-15
2	GO:0009535: chloroplast thylakoid membrane	4.45E-10
3	GO:0031969: chloroplast membrane	6.34E-06
4	GO:0009570: chloroplast stroma	1.07E-05
5	GO:0009523: photosystem II	7.95E-05
6	GO:0010007: magnesium chelatase complex	8.61E-05
7	GO:0009707: chloroplast outer membrane	1.72E-04
8	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.78E-04
9	GO:0009941: chloroplast envelope	3.26E-04
10	GO:0031359: integral component of chloroplast outer membrane	4.02E-04
11	GO:0009539: photosystem II reaction center	5.27E-04
12	GO:0010287: plastoglobule	6.42E-04
13	GO:0042651: thylakoid membrane	1.35E-03
14	GO:0009654: photosystem II oxygen evolving complex	1.35E-03
15	GO:0009295: nucleoid	2.72E-03
16	GO:0005778: peroxisomal membrane	2.72E-03
17	GO:0010319: stromule	2.72E-03
18	GO:0009579: thylakoid	5.26E-03
19	GO:0009534: chloroplast thylakoid	5.31E-03
20	GO:0009536: plastid	1.09E-02
21	GO:0005774: vacuolar membrane	3.10E-02
22	GO:0005618: cell wall	3.54E-02
23	GO:0005777: peroxisome	3.92E-02
24	GO:0005773: vacuole	4.73E-02
25	GO:0016021: integral component of membrane	4.84E-02