co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G56440

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071219: cellular response to molecule of bacterial origin	8.58E-05
2	GO:0080142: regulation of salicylic acid biosynthetic process	8.58E-05
3	GO:0009626: plant-type hypersensitive response	1.74E-04
4	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.37E-04
5	GO:0010112: regulation of systemic acquired resistance	3.07E-04
6	GO:1900426: positive regulation of defense response to bacterium	3.43E-04
7	GO:0006829: zinc II ion transport	4.98E-04
8	GO:0006623: protein targeting to vacuole	1.13E-03
9	GO:0002229: defense response to oomycetes	1.18E-03
10	GO:0009615: response to virus	1.50E-03
11	GO:0006950: response to stress	1.67E-03
12	GO:0051707: response to other organism	2.49E-03
13	GO:0006812: cation transport	2.90E-03
14	GO:0010224: response to UV-B	3.11E-03
15	GO:0042742: defense response to bacterium	3.23E-03
16	GO:0030154: cell differentiation	3.52E-03
17	GO:0007623: circadian rhythm	5.61E-03
18	GO:0007166: cell surface receptor signaling pathway	6.15E-03
19	GO:0009617: response to bacterium	6.34E-03
20	GO:0006355: regulation of transcription, DNA-templated	7.84E-03
21	GO:0080167: response to karrikin	8.82E-03
22	GO:0006886: intracellular protein transport	1.02E-02
23	GO:0009751: response to salicylic acid	1.15E-02
24	GO:0055085: transmembrane transport	2.06E-02
25	GO:0009414: response to water deprivation	2.83E-02
26	GO:0015031: protein transport	3.42E-02
27	GO:0007165: signal transduction	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0001085: RNA polymerase II transcription factor binding	2.03E-05
2	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	6.61E-05
3	GO:0004040: amidase activity	1.12E-04
4	GO:0031593: polyubiquitin binding	1.41E-04
5	GO:0004656: procollagen-proline 4-dioxygenase activity	1.71E-04
6	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.56E-04
7	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.84E-04
8	GO:0003682: chromatin binding	5.56E-04
9	GO:0003712: transcription cofactor activity	5.80E-04
10	GO:0031418: L-ascorbic acid binding	6.66E-04
11	GO:0008324: cation transmembrane transporter activity	7.09E-04
12	GO:0046873: metal ion transmembrane transporter activity	1.03E-03
13	GO:0030247: polysaccharide binding	1.67E-03
14	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.10E-03
15	GO:0005516: calmodulin binding	2.42E-03
16	GO:0005509: calcium ion binding	2.99E-03
17	GO:0005506: iron ion binding	3.18E-03
18	GO:0043531: ADP binding	8.10E-03
19	GO:0004497: monooxygenase activity	8.82E-03
20	GO:0043565: sequence-specific DNA binding	1.65E-02
21	GO:0000166: nucleotide binding	1.74E-02
22	GO:0019825: oxygen binding	2.24E-02
23	GO:0020037: heme binding	3.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005667: transcription factor complex	4.67E-05
2	GO:0017119: Golgi transport complex	3.81E-04
3	GO:0005802: trans-Golgi network	2.57E-03
4	GO:0005768: endosome	2.91E-03
5	GO:0009543: chloroplast thylakoid lumen	4.50E-03
6	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	8.10E-03
7	GO:0005887: integral component of plasma membrane	1.44E-02
8	GO:0005886: plasma membrane	2.16E-02
9	GO:0009505: plant-type cell wall	3.39E-02
10	GO:0000139: Golgi membrane	3.58E-02
11	GO:0005789: endoplasmic reticulum membrane	3.90E-02