Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G56140

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071289: cellular response to nickel ion0.00E+00
2GO:1903086: negative regulation of sinapate ester biosynthetic process0.00E+00
3GO:0034775: glutathione transmembrane transport0.00E+00
4GO:0050708: regulation of protein secretion0.00E+00
5GO:0032497: detection of lipopolysaccharide0.00E+00
6GO:0010200: response to chitin7.70E-15
7GO:0006955: immune response1.04E-06
8GO:0048544: recognition of pollen3.07E-06
9GO:0002679: respiratory burst involved in defense response1.06E-05
10GO:0006952: defense response2.28E-05
11GO:0006751: glutathione catabolic process4.79E-05
12GO:0010337: regulation of salicylic acid metabolic process4.79E-05
13GO:0007166: cell surface receptor signaling pathway5.32E-05
14GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response6.70E-05
15GO:0006468: protein phosphorylation9.19E-05
16GO:0051180: vitamin transport1.58E-04
17GO:0030974: thiamine pyrophosphate transport1.58E-04
18GO:0050691: regulation of defense response to virus by host1.58E-04
19GO:0051865: protein autoubiquitination1.77E-04
20GO:2000280: regulation of root development2.12E-04
21GO:0009737: response to abscisic acid3.07E-04
22GO:0046939: nucleotide phosphorylation3.60E-04
23GO:0015893: drug transport3.60E-04
24GO:0052542: defense response by callose deposition3.60E-04
25GO:0045087: innate immune response3.73E-04
26GO:0009617: response to bacterium4.76E-04
27GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway5.89E-04
28GO:0006598: polyamine catabolic process5.89E-04
29GO:0080168: abscisic acid transport5.89E-04
30GO:0042344: indole glucosinolate catabolic process5.89E-04
31GO:0009695: jasmonic acid biosynthetic process6.55E-04
32GO:0006970: response to osmotic stress7.91E-04
33GO:0042742: defense response to bacterium8.37E-04
34GO:0043207: response to external biotic stimulus8.43E-04
35GO:0030100: regulation of endocytosis8.43E-04
36GO:0033014: tetrapyrrole biosynthetic process8.43E-04
37GO:0042147: retrograde transport, endosome to Golgi9.96E-04
38GO:0009620: response to fungus1.04E-03
39GO:0046345: abscisic acid catabolic process1.12E-03
40GO:0009652: thigmotropism1.12E-03
41GO:0045088: regulation of innate immune response1.12E-03
42GO:0034440: lipid oxidation1.12E-03
43GO:0010107: potassium ion import1.12E-03
44GO:1902347: response to strigolactone1.12E-03
45GO:0009749: response to glucose1.32E-03
46GO:0009164: nucleoside catabolic process1.41E-03
47GO:0045487: gibberellin catabolic process1.41E-03
48GO:2000762: regulation of phenylpropanoid metabolic process1.41E-03
49GO:0006891: intra-Golgi vesicle-mediated transport1.41E-03
50GO:1900425: negative regulation of defense response to bacterium1.74E-03
51GO:0010555: response to mannitol2.09E-03
52GO:0080086: stamen filament development2.09E-03
53GO:2000067: regulation of root morphogenesis2.09E-03
54GO:0048280: vesicle fusion with Golgi apparatus2.09E-03
55GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway2.45E-03
56GO:0010161: red light signaling pathway2.45E-03
57GO:0008219: cell death2.64E-03
58GO:0045010: actin nucleation2.84E-03
59GO:1900150: regulation of defense response to fungus2.84E-03
60GO:2000070: regulation of response to water deprivation2.84E-03
61GO:0009932: cell tip growth3.25E-03
62GO:0007186: G-protein coupled receptor signaling pathway3.25E-03
63GO:0006979: response to oxidative stress3.29E-03
64GO:0098656: anion transmembrane transport3.67E-03
65GO:0090305: nucleic acid phosphodiester bond hydrolysis3.67E-03
66GO:0090333: regulation of stomatal closure3.67E-03
67GO:0006783: heme biosynthetic process3.67E-03
68GO:0006779: porphyrin-containing compound biosynthetic process4.12E-03
69GO:0009611: response to wounding4.34E-03
70GO:0006896: Golgi to vacuole transport4.58E-03
71GO:0006782: protoporphyrinogen IX biosynthetic process4.58E-03
72GO:0019538: protein metabolic process4.58E-03
73GO:0009723: response to ethylene4.83E-03
74GO:0006855: drug transmembrane transport5.00E-03
75GO:0010015: root morphogenesis5.05E-03
76GO:0009682: induced systemic resistance5.05E-03
77GO:0052544: defense response by callose deposition in cell wall5.05E-03
78GO:0009750: response to fructose5.05E-03
79GO:0006890: retrograde vesicle-mediated transport, Golgi to ER5.55E-03
80GO:0010105: negative regulation of ethylene-activated signaling pathway5.55E-03
81GO:0046777: protein autophosphorylation5.75E-03
82GO:0010224: response to UV-B5.98E-03
83GO:0055046: microgametogenesis6.06E-03
84GO:0002237: response to molecule of bacterial origin6.59E-03
85GO:0045892: negative regulation of transcription, DNA-templated6.77E-03
86GO:0009901: anther dehiscence7.13E-03
87GO:0071732: cellular response to nitric oxide7.13E-03
88GO:0070588: calcium ion transmembrane transport7.13E-03
89GO:0009626: plant-type hypersensitive response7.27E-03
90GO:0009863: salicylic acid mediated signaling pathway8.27E-03
91GO:0009742: brassinosteroid mediated signaling pathway8.71E-03
92GO:0009651: response to salt stress9.02E-03
93GO:0098542: defense response to other organism9.46E-03
94GO:0031408: oxylipin biosynthetic process9.46E-03
95GO:0016998: cell wall macromolecule catabolic process9.46E-03
96GO:0009753: response to jasmonic acid9.47E-03
97GO:0030245: cellulose catabolic process1.01E-02
98GO:0071215: cellular response to abscisic acid stimulus1.07E-02
99GO:0009686: gibberellin biosynthetic process1.07E-02
100GO:0071369: cellular response to ethylene stimulus1.07E-02
101GO:0040007: growth1.07E-02
102GO:0010089: xylem development1.14E-02
103GO:0019722: calcium-mediated signaling1.14E-02
104GO:0006817: phosphate ion transport1.14E-02
105GO:0010091: trichome branching1.14E-02
106GO:0009414: response to water deprivation1.18E-02
107GO:0010118: stomatal movement1.27E-02
108GO:0048653: anther development1.27E-02
109GO:0042631: cellular response to water deprivation1.27E-02
110GO:0006623: protein targeting to vacuole1.48E-02
111GO:0002229: defense response to oomycetes1.56E-02
112GO:0010193: response to ozone1.56E-02
113GO:0009630: gravitropism1.63E-02
114GO:0006470: protein dephosphorylation1.63E-02
115GO:1901657: glycosyl compound metabolic process1.71E-02
116GO:0071281: cellular response to iron ion1.71E-02
117GO:0019760: glucosinolate metabolic process1.78E-02
118GO:0009639: response to red or far red light1.78E-02
119GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.10E-02
120GO:0009816: defense response to bacterium, incompatible interaction2.10E-02
121GO:0006810: transport2.17E-02
122GO:0015995: chlorophyll biosynthetic process2.27E-02
123GO:0006888: ER to Golgi vesicle-mediated transport2.27E-02
124GO:0048573: photoperiodism, flowering2.27E-02
125GO:0009817: defense response to fungus, incompatible interaction2.44E-02
126GO:0009637: response to blue light2.89E-02
127GO:0006839: mitochondrial transport3.17E-02
128GO:0006897: endocytosis3.27E-02
129GO:0009744: response to sucrose3.46E-02
130GO:0007165: signal transduction3.63E-02
131GO:0008643: carbohydrate transport3.66E-02
132GO:0031347: regulation of defense response3.96E-02
133GO:0000165: MAPK cascade3.96E-02
134GO:0009751: response to salicylic acid3.98E-02
135GO:0006351: transcription, DNA-templated4.48E-02
136GO:0016310: phosphorylation4.59E-02
137GO:0043086: negative regulation of catalytic activity4.82E-02
RankGO TermAdjusted P value
1GO:0032442: phenylcoumaran benzylic ether reductase activity0.00E+00
2GO:0005522: profilin binding0.00E+00
3GO:0016301: kinase activity7.02E-07
4GO:0003840: gamma-glutamyltransferase activity4.55E-06
5GO:0036374: glutathione hydrolase activity4.55E-06
6GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.06E-05
7GO:0030246: carbohydrate binding6.58E-05
8GO:0052894: norspermine:oxygen oxidoreductase activity1.58E-04
9GO:0090422: thiamine pyrophosphate transporter activity1.58E-04
10GO:0015085: calcium ion transmembrane transporter activity1.58E-04
11GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity1.58E-04
12GO:0090440: abscisic acid transporter activity1.58E-04
13GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.23E-04
14GO:0005524: ATP binding3.47E-04
15GO:0004103: choline kinase activity3.60E-04
16GO:0008883: glutamyl-tRNA reductase activity3.60E-04
17GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity3.60E-04
18GO:0001664: G-protein coupled receptor binding5.89E-04
19GO:0046592: polyamine oxidase activity5.89E-04
20GO:0031683: G-protein beta/gamma-subunit complex binding5.89E-04
21GO:0046423: allene-oxide cyclase activity5.89E-04
22GO:0004383: guanylate cyclase activity5.89E-04
23GO:0016165: linoleate 13S-lipoxygenase activity5.89E-04
24GO:0004674: protein serine/threonine kinase activity7.91E-04
25GO:0019201: nucleotide kinase activity8.43E-04
26GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity8.43E-04
27GO:0001653: peptide receptor activity8.43E-04
28GO:0043565: sequence-specific DNA binding8.73E-04
29GO:0008514: organic anion transmembrane transporter activity9.22E-04
30GO:0010294: abscisic acid glucosyltransferase activity1.41E-03
31GO:0047631: ADP-ribose diphosphatase activity1.41E-03
32GO:0000210: NAD+ diphosphatase activity1.74E-03
33GO:0019137: thioglucosidase activity1.74E-03
34GO:0019900: kinase binding2.09E-03
35GO:0051020: GTPase binding2.09E-03
36GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides2.09E-03
37GO:0004017: adenylate kinase activity2.09E-03
38GO:0102483: scopolin beta-glucosidase activity2.38E-03
39GO:0004721: phosphoprotein phosphatase activity2.38E-03
40GO:0008143: poly(A) binding2.45E-03
41GO:0015238: drug transmembrane transporter activity2.77E-03
42GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.04E-03
43GO:0008422: beta-glucosidase activity3.64E-03
44GO:0004713: protein tyrosine kinase activity4.58E-03
45GO:0019888: protein phosphatase regulator activity6.06E-03
46GO:0005388: calcium-transporting ATPase activity6.06E-03
47GO:0005315: inorganic phosphate transmembrane transporter activity6.06E-03
48GO:0004672: protein kinase activity6.36E-03
49GO:0008131: primary amine oxidase activity6.59E-03
50GO:0004725: protein tyrosine phosphatase activity7.69E-03
51GO:0003779: actin binding7.97E-03
52GO:0008408: 3'-5' exonuclease activity9.46E-03
53GO:0004707: MAP kinase activity9.46E-03
54GO:0009055: electron carrier activity9.47E-03
55GO:0015297: antiporter activity1.36E-02
56GO:0051015: actin filament binding1.71E-02
57GO:0016791: phosphatase activity1.78E-02
58GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.86E-02
59GO:0003700: transcription factor activity, sequence-specific DNA binding2.19E-02
60GO:0030247: polysaccharide binding2.27E-02
61GO:0050660: flavin adenine dinucleotide binding2.56E-02
62GO:0005516: calmodulin binding2.99E-02
63GO:0000149: SNARE binding3.08E-02
64GO:0004712: protein serine/threonine/tyrosine kinase activity3.08E-02
65GO:0050661: NADP binding3.17E-02
66GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.28E-02
67GO:0004871: signal transducer activity3.43E-02
68GO:0005484: SNAP receptor activity3.46E-02
69GO:0004722: protein serine/threonine phosphatase activity3.59E-02
70GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.65E-02
71GO:0005509: calcium ion binding3.91E-02
72GO:0003924: GTPase activity4.03E-02
73GO:0044212: transcription regulatory region DNA binding4.32E-02
74GO:0031625: ubiquitin protein ligase binding4.60E-02
75GO:0005215: transporter activity4.88E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane4.59E-06
2GO:0005911: cell-cell junction1.58E-04
3GO:0031902: late endosome membrane4.66E-04
4GO:0005801: cis-Golgi network2.09E-03
5GO:0012507: ER to Golgi transport vesicle membrane2.84E-03
6GO:0010494: cytoplasmic stress granule3.67E-03
7GO:0016604: nuclear body4.12E-03
8GO:0000159: protein phosphatase type 2A complex5.05E-03
9GO:0090404: pollen tube tip5.05E-03
10GO:0030136: clathrin-coated vesicle1.20E-02
11GO:0005770: late endosome1.34E-02
12GO:0016021: integral component of membrane2.13E-02
13GO:0031201: SNARE complex3.27E-02
14GO:0090406: pollen tube3.46E-02
15GO:0010008: endosome membrane4.93E-02
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Gene type



Gene DE type