GO Enrichment Analysis of Co-expressed Genes with
AT1G56070
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 3 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 4 | GO:0046686: response to cadmium ion | 1.91E-09 |
| 5 | GO:0034976: response to endoplasmic reticulum stress | 1.66E-06 |
| 6 | GO:0006626: protein targeting to mitochondrion | 7.50E-05 |
| 7 | GO:0045454: cell redox homeostasis | 1.09E-04 |
| 8 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 1.23E-04 |
| 9 | GO:0006096: glycolytic process | 1.23E-04 |
| 10 | GO:0030150: protein import into mitochondrial matrix | 1.25E-04 |
| 11 | GO:0007005: mitochondrion organization | 1.70E-04 |
| 12 | GO:0045039: protein import into mitochondrial inner membrane | 2.11E-04 |
| 13 | GO:0006556: S-adenosylmethionine biosynthetic process | 2.11E-04 |
| 14 | GO:0010253: UDP-rhamnose biosynthetic process | 2.11E-04 |
| 15 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 3.09E-04 |
| 16 | GO:0009735: response to cytokinin | 3.49E-04 |
| 17 | GO:0009651: response to salt stress | 4.06E-04 |
| 18 | GO:0051205: protein insertion into membrane | 4.15E-04 |
| 19 | GO:0006461: protein complex assembly | 5.26E-04 |
| 20 | GO:0006457: protein folding | 5.97E-04 |
| 21 | GO:0010315: auxin efflux | 6.44E-04 |
| 22 | GO:0010043: response to zinc ion | 6.92E-04 |
| 23 | GO:0006458: 'de novo' protein folding | 7.68E-04 |
| 24 | GO:0006412: translation | 9.79E-04 |
| 25 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.03E-03 |
| 26 | GO:0006002: fructose 6-phosphate metabolic process | 1.17E-03 |
| 27 | GO:0001558: regulation of cell growth | 1.17E-03 |
| 28 | GO:0006098: pentose-phosphate shunt | 1.32E-03 |
| 29 | GO:0010205: photoinhibition | 1.47E-03 |
| 30 | GO:0043067: regulation of programmed cell death | 1.47E-03 |
| 31 | GO:0006259: DNA metabolic process | 1.63E-03 |
| 32 | GO:0010162: seed dormancy process | 1.63E-03 |
| 33 | GO:0051555: flavonol biosynthetic process | 1.63E-03 |
| 34 | GO:0009553: embryo sac development | 1.74E-03 |
| 35 | GO:0006820: anion transport | 1.96E-03 |
| 36 | GO:0006094: gluconeogenesis | 2.14E-03 |
| 37 | GO:0002237: response to molecule of bacterial origin | 2.32E-03 |
| 38 | GO:0009225: nucleotide-sugar metabolic process | 2.50E-03 |
| 39 | GO:0006413: translational initiation | 2.87E-03 |
| 40 | GO:0000027: ribosomal large subunit assembly | 2.88E-03 |
| 41 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.88E-03 |
| 42 | GO:0010073: meristem maintenance | 3.08E-03 |
| 43 | GO:0051302: regulation of cell division | 3.08E-03 |
| 44 | GO:0061077: chaperone-mediated protein folding | 3.29E-03 |
| 45 | GO:0006730: one-carbon metabolic process | 3.50E-03 |
| 46 | GO:0080092: regulation of pollen tube growth | 3.50E-03 |
| 47 | GO:0009693: ethylene biosynthetic process | 3.71E-03 |
| 48 | GO:0009294: DNA mediated transformation | 3.71E-03 |
| 49 | GO:0042127: regulation of cell proliferation | 3.93E-03 |
| 50 | GO:0008033: tRNA processing | 4.37E-03 |
| 51 | GO:0045489: pectin biosynthetic process | 4.60E-03 |
| 52 | GO:0048868: pollen tube development | 4.60E-03 |
| 53 | GO:0010183: pollen tube guidance | 5.07E-03 |
| 54 | GO:0009749: response to glucose | 5.07E-03 |
| 55 | GO:0071281: cellular response to iron ion | 5.81E-03 |
| 56 | GO:0009567: double fertilization forming a zygote and endosperm | 6.07E-03 |
| 57 | GO:0016049: cell growth | 7.96E-03 |
| 58 | GO:0006811: ion transport | 8.82E-03 |
| 59 | GO:0048527: lateral root development | 9.12E-03 |
| 60 | GO:0006839: mitochondrial transport | 1.07E-02 |
| 61 | GO:0009644: response to high light intensity | 1.23E-02 |
| 62 | GO:0000154: rRNA modification | 1.26E-02 |
| 63 | GO:0006364: rRNA processing | 1.44E-02 |
| 64 | GO:0048316: seed development | 1.65E-02 |
| 65 | GO:0006396: RNA processing | 1.88E-02 |
| 66 | GO:0006414: translational elongation | 2.30E-02 |
| 67 | GO:0042744: hydrogen peroxide catabolic process | 2.37E-02 |
| 68 | GO:0009790: embryo development | 2.41E-02 |
| 69 | GO:0006508: proteolysis | 2.56E-02 |
| 70 | GO:0010150: leaf senescence | 2.72E-02 |
| 71 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.81E-02 |
| 72 | GO:0071555: cell wall organization | 3.12E-02 |
| 73 | GO:0006979: response to oxidative stress | 3.14E-02 |
| 74 | GO:0009860: pollen tube growth | 3.91E-02 |
| 75 | GO:0009723: response to ethylene | 4.12E-02 |
| 76 | GO:0015979: photosynthesis | 4.75E-02 |
| 77 | GO:0045892: negative regulation of transcription, DNA-templated | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 2 | GO:0003746: translation elongation factor activity | 1.01E-06 |
| 3 | GO:0003756: protein disulfide isomerase activity | 4.56E-06 |
| 4 | GO:0004618: phosphoglycerate kinase activity | 1.23E-04 |
| 5 | GO:0008460: dTDP-glucose 4,6-dehydratase activity | 1.23E-04 |
| 6 | GO:0010280: UDP-L-rhamnose synthase activity | 1.23E-04 |
| 7 | GO:0070361: mitochondrial light strand promoter anti-sense binding | 1.23E-04 |
| 8 | GO:0050377: UDP-glucose 4,6-dehydratase activity | 1.23E-04 |
| 9 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 1.23E-04 |
| 10 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 1.23E-04 |
| 11 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 1.23E-04 |
| 12 | GO:0003735: structural constituent of ribosome | 1.29E-04 |
| 13 | GO:0004176: ATP-dependent peptidase activity | 1.54E-04 |
| 14 | GO:0004478: methionine adenosyltransferase activity | 2.11E-04 |
| 15 | GO:0008469: histone-arginine N-methyltransferase activity | 2.11E-04 |
| 16 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 2.11E-04 |
| 17 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 2.11E-04 |
| 18 | GO:0016853: isomerase activity | 2.81E-04 |
| 19 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.02E-04 |
| 20 | GO:0004332: fructose-bisphosphate aldolase activity | 6.44E-04 |
| 21 | GO:0035252: UDP-xylosyltransferase activity | 6.44E-04 |
| 22 | GO:0004656: procollagen-proline 4-dioxygenase activity | 7.68E-04 |
| 23 | GO:0005525: GTP binding | 8.56E-04 |
| 24 | GO:0008235: metalloexopeptidase activity | 8.97E-04 |
| 25 | GO:0003872: 6-phosphofructokinase activity | 8.97E-04 |
| 26 | GO:0030515: snoRNA binding | 8.97E-04 |
| 27 | GO:0015288: porin activity | 1.03E-03 |
| 28 | GO:0008135: translation factor activity, RNA binding | 1.17E-03 |
| 29 | GO:0008308: voltage-gated anion channel activity | 1.17E-03 |
| 30 | GO:0003678: DNA helicase activity | 1.32E-03 |
| 31 | GO:0044183: protein binding involved in protein folding | 1.79E-03 |
| 32 | GO:0051082: unfolded protein binding | 1.80E-03 |
| 33 | GO:0003729: mRNA binding | 2.12E-03 |
| 34 | GO:0015114: phosphate ion transmembrane transporter activity | 2.14E-03 |
| 35 | GO:0015266: protein channel activity | 2.14E-03 |
| 36 | GO:0031418: L-ascorbic acid binding | 2.88E-03 |
| 37 | GO:0004407: histone deacetylase activity | 2.88E-03 |
| 38 | GO:0051087: chaperone binding | 3.08E-03 |
| 39 | GO:0003743: translation initiation factor activity | 3.58E-03 |
| 40 | GO:0047134: protein-disulfide reductase activity | 4.15E-03 |
| 41 | GO:0004791: thioredoxin-disulfide reductase activity | 4.83E-03 |
| 42 | GO:0010181: FMN binding | 4.83E-03 |
| 43 | GO:0008237: metallopeptidase activity | 6.33E-03 |
| 44 | GO:0004004: ATP-dependent RNA helicase activity | 7.68E-03 |
| 45 | GO:0008236: serine-type peptidase activity | 7.96E-03 |
| 46 | GO:0003924: GTPase activity | 8.64E-03 |
| 47 | GO:0004222: metalloendopeptidase activity | 8.82E-03 |
| 48 | GO:0050897: cobalt ion binding | 9.12E-03 |
| 49 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 9.73E-03 |
| 50 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.07E-02 |
| 51 | GO:0000166: nucleotide binding | 1.54E-02 |
| 52 | GO:0005524: ATP binding | 1.79E-02 |
| 53 | GO:0008026: ATP-dependent helicase activity | 1.92E-02 |
| 54 | GO:0019843: rRNA binding | 2.16E-02 |
| 55 | GO:0016829: lyase activity | 2.29E-02 |
| 56 | GO:0004252: serine-type endopeptidase activity | 2.33E-02 |
| 57 | GO:0005509: calcium ion binding | 2.88E-02 |
| 58 | GO:0003824: catalytic activity | 3.42E-02 |
| 59 | GO:0008168: methyltransferase activity | 3.61E-02 |
| 60 | GO:0004601: peroxidase activity | 3.71E-02 |
| 61 | GO:0016491: oxidoreductase activity | 4.09E-02 |
| 62 | GO:0046872: metal ion binding | 4.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 3 | GO:0005774: vacuolar membrane | 6.01E-09 |
| 4 | GO:0016020: membrane | 1.35E-08 |
| 5 | GO:0005829: cytosol | 2.81E-08 |
| 6 | GO:0005730: nucleolus | 5.07E-08 |
| 7 | GO:0005618: cell wall | 1.82E-06 |
| 8 | GO:0009506: plasmodesma | 4.41E-06 |
| 9 | GO:0005743: mitochondrial inner membrane | 9.93E-06 |
| 10 | GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex | 5.03E-05 |
| 11 | GO:0005840: ribosome | 2.19E-04 |
| 12 | GO:0005773: vacuole | 2.43E-04 |
| 13 | GO:0022626: cytosolic ribosome | 3.74E-04 |
| 14 | GO:0005783: endoplasmic reticulum | 4.62E-04 |
| 15 | GO:0022627: cytosolic small ribosomal subunit | 4.81E-04 |
| 16 | GO:0005788: endoplasmic reticulum lumen | 4.92E-04 |
| 17 | GO:0005737: cytoplasm | 5.73E-04 |
| 18 | GO:0031428: box C/D snoRNP complex | 6.44E-04 |
| 19 | GO:0005851: eukaryotic translation initiation factor 2B complex | 6.44E-04 |
| 20 | GO:0022625: cytosolic large ribosomal subunit | 8.13E-04 |
| 21 | GO:0000326: protein storage vacuole | 1.17E-03 |
| 22 | GO:0046930: pore complex | 1.17E-03 |
| 23 | GO:0005742: mitochondrial outer membrane translocase complex | 1.17E-03 |
| 24 | GO:0005747: mitochondrial respiratory chain complex I | 1.55E-03 |
| 25 | GO:0032040: small-subunit processome | 1.96E-03 |
| 26 | GO:0005739: mitochondrion | 2.22E-03 |
| 27 | GO:0005741: mitochondrial outer membrane | 3.29E-03 |
| 28 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 3.93E-03 |
| 29 | GO:0030529: intracellular ribonucleoprotein complex | 6.85E-03 |
| 30 | GO:0009536: plastid | 8.01E-03 |
| 31 | GO:0009505: plant-type cell wall | 8.23E-03 |
| 32 | GO:0015934: large ribosomal subunit | 9.12E-03 |
| 33 | GO:0005789: endoplasmic reticulum membrane | 1.06E-02 |
| 34 | GO:0031902: late endosome membrane | 1.10E-02 |
| 35 | GO:0005834: heterotrimeric G-protein complex | 1.69E-02 |
| 36 | GO:0010287: plastoglobule | 2.08E-02 |
| 37 | GO:0005886: plasma membrane | 2.23E-02 |
| 38 | GO:0005759: mitochondrial matrix | 2.54E-02 |
| 39 | GO:0005794: Golgi apparatus | 3.18E-02 |
| 40 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.96E-02 |
| 41 | GO:0009507: chloroplast | 4.00E-02 |
| 42 | GO:0000139: Golgi membrane | 4.21E-02 |