GO Enrichment Analysis of Co-expressed Genes with
AT1G55840
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000786: positive regulation of autophagosome assembly | 0.00E+00 |
| 2 | GO:0090549: response to carbon starvation | 0.00E+00 |
| 3 | GO:0043482: cellular pigment accumulation | 0.00E+00 |
| 4 | GO:0046085: adenosine metabolic process | 0.00E+00 |
| 5 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 6 | GO:1990022: RNA polymerase III complex localization to nucleus | 2.08E-05 |
| 7 | GO:0044376: RNA polymerase II complex import to nucleus | 2.08E-05 |
| 8 | GO:0051252: regulation of RNA metabolic process | 5.37E-05 |
| 9 | GO:0008333: endosome to lysosome transport | 9.50E-05 |
| 10 | GO:0046417: chorismate metabolic process | 9.50E-05 |
| 11 | GO:0006760: folic acid-containing compound metabolic process | 9.50E-05 |
| 12 | GO:0006516: glycoprotein catabolic process | 1.42E-04 |
| 13 | GO:0006749: glutathione metabolic process | 1.95E-04 |
| 14 | GO:0018344: protein geranylgeranylation | 2.51E-04 |
| 15 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 3.73E-04 |
| 16 | GO:0000028: ribosomal small subunit assembly | 5.05E-04 |
| 17 | GO:0006526: arginine biosynthetic process | 5.74E-04 |
| 18 | GO:0006995: cellular response to nitrogen starvation | 7.94E-04 |
| 19 | GO:0009073: aromatic amino acid family biosynthetic process | 8.71E-04 |
| 20 | GO:0006378: mRNA polyadenylation | 8.71E-04 |
| 21 | GO:0010015: root morphogenesis | 8.71E-04 |
| 22 | GO:0002237: response to molecule of bacterial origin | 1.11E-03 |
| 23 | GO:0010431: seed maturation | 1.56E-03 |
| 24 | GO:0042147: retrograde transport, endosome to Golgi | 1.96E-03 |
| 25 | GO:0000413: protein peptidyl-prolyl isomerization | 2.07E-03 |
| 26 | GO:0006886: intracellular protein transport | 2.39E-03 |
| 27 | GO:0010090: trichome morphogenesis | 2.73E-03 |
| 28 | GO:0006914: autophagy | 2.85E-03 |
| 29 | GO:0016126: sterol biosynthetic process | 3.21E-03 |
| 30 | GO:0009407: toxin catabolic process | 4.10E-03 |
| 31 | GO:0000154: rRNA modification | 5.81E-03 |
| 32 | GO:0009636: response to toxic substance | 5.81E-03 |
| 33 | GO:0009965: leaf morphogenesis | 5.81E-03 |
| 34 | GO:0010224: response to UV-B | 6.75E-03 |
| 35 | GO:0016569: covalent chromatin modification | 8.07E-03 |
| 36 | GO:0042742: defense response to bacterium | 1.01E-02 |
| 37 | GO:0009790: embryo development | 1.10E-02 |
| 38 | GO:0009826: unidimensional cell growth | 1.64E-02 |
| 39 | GO:0080167: response to karrikin | 1.96E-02 |
| 40 | GO:0016192: vesicle-mediated transport | 2.03E-02 |
| 41 | GO:0044550: secondary metabolite biosynthetic process | 2.08E-02 |
| 42 | GO:0009793: embryo development ending in seed dormancy | 2.36E-02 |
| 43 | GO:0032259: methylation | 2.51E-02 |
| 44 | GO:0006281: DNA repair | 2.59E-02 |
| 45 | GO:0048364: root development | 2.67E-02 |
| 46 | GO:0055114: oxidation-reduction process | 3.60E-02 |
| 47 | GO:0009908: flower development | 3.63E-02 |
| 48 | GO:0009555: pollen development | 3.90E-02 |
| 49 | GO:0051301: cell division | 4.14E-02 |
| 50 | GO:0006457: protein folding | 4.68E-02 |
| 51 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 2 | GO:0003838: sterol 24-C-methyltransferase activity | 2.08E-05 |
| 3 | GO:0004560: alpha-L-fucosidase activity | 2.08E-05 |
| 4 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 5.37E-05 |
| 5 | GO:0008428: ribonuclease inhibitor activity | 5.37E-05 |
| 6 | GO:0004106: chorismate mutase activity | 5.37E-05 |
| 7 | GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 5.37E-05 |
| 8 | GO:0004839: ubiquitin activating enzyme activity | 5.37E-05 |
| 9 | GO:0004663: Rab geranylgeranyltransferase activity | 9.50E-05 |
| 10 | GO:0008649: rRNA methyltransferase activity | 9.50E-05 |
| 11 | GO:0008430: selenium binding | 9.50E-05 |
| 12 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.95E-04 |
| 13 | GO:0008948: oxaloacetate decarboxylase activity | 2.51E-04 |
| 14 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 6.45E-04 |
| 15 | GO:0047617: acyl-CoA hydrolase activity | 7.18E-04 |
| 16 | GO:0046872: metal ion binding | 1.30E-03 |
| 17 | GO:0004298: threonine-type endopeptidase activity | 1.56E-03 |
| 18 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 2.50E-03 |
| 19 | GO:0008237: metallopeptidase activity | 2.96E-03 |
| 20 | GO:0004364: glutathione transferase activity | 5.22E-03 |
| 21 | GO:0051537: 2 iron, 2 sulfur cluster binding | 5.66E-03 |
| 22 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.97E-03 |
| 23 | GO:0008565: protein transporter activity | 1.12E-02 |
| 24 | GO:0020037: heme binding | 1.61E-02 |
| 25 | GO:0016788: hydrolase activity, acting on ester bonds | 1.71E-02 |
| 26 | GO:0043531: ADP binding | 1.80E-02 |
| 27 | GO:0008233: peptidase activity | 1.94E-02 |
| 28 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.36E-02 |
| 29 | GO:0003924: GTPase activity | 2.59E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005968: Rab-protein geranylgeranyltransferase complex | 1.42E-04 |
| 2 | GO:0005849: mRNA cleavage factor complex | 1.42E-04 |
| 3 | GO:0005771: multivesicular body | 3.11E-04 |
| 4 | GO:0030904: retromer complex | 3.11E-04 |
| 5 | GO:0019773: proteasome core complex, alpha-subunit complex | 5.74E-04 |
| 6 | GO:0005763: mitochondrial small ribosomal subunit | 6.45E-04 |
| 7 | GO:0005737: cytoplasm | 8.75E-04 |
| 8 | GO:0005839: proteasome core complex | 1.56E-03 |
| 9 | GO:0005829: cytosol | 3.70E-03 |
| 10 | GO:0031902: late endosome membrane | 5.07E-03 |
| 11 | GO:0000502: proteasome complex | 6.59E-03 |
| 12 | GO:0005747: mitochondrial respiratory chain complex I | 7.57E-03 |
| 13 | GO:0005773: vacuole | 1.23E-02 |
| 14 | GO:0005794: Golgi apparatus | 1.63E-02 |
| 15 | GO:0005783: endoplasmic reticulum | 1.74E-02 |
| 16 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.80E-02 |
| 17 | GO:0005874: microtubule | 1.91E-02 |
| 18 | GO:0043231: intracellular membrane-bounded organelle | 2.78E-02 |
| 19 | GO:0022626: cytosolic ribosome | 3.78E-02 |
| 20 | GO:0005777: peroxisome | 4.30E-02 |