co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G55260

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905177: tracheary element differentiation	0.00E+00
2	GO:0009773: photosynthetic electron transport in photosystem I	1.03E-05
3	GO:0000023: maltose metabolic process	1.67E-05
4	GO:0000025: maltose catabolic process	1.67E-05
5	GO:0005980: glycogen catabolic process	1.67E-05
6	GO:0010025: wax biosynthetic process	2.22E-05
7	GO:0005976: polysaccharide metabolic process	4.35E-05
8	GO:1901959: positive regulation of cutin biosynthetic process	4.35E-05
9	GO:0006518: peptide metabolic process	7.77E-05
10	GO:0010623: programmed cell death involved in cell development	7.77E-05
11	GO:1904278: positive regulation of wax biosynthetic process	7.77E-05
12	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.17E-04
13	GO:0010600: regulation of auxin biosynthetic process	1.61E-04
14	GO:0045723: positive regulation of fatty acid biosynthetic process	1.61E-04
15	GO:0010508: positive regulation of autophagy	1.61E-04
16	GO:0000470: maturation of LSU-rRNA	2.59E-04
17	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	3.11E-04
18	GO:0010161: red light signaling pathway	3.66E-04
19	GO:0009704: de-etiolation	4.23E-04
20	GO:0010928: regulation of auxin mediated signaling pathway	4.23E-04
21	GO:0042761: very long-chain fatty acid biosynthetic process	6.04E-04
22	GO:0005983: starch catabolic process	8.01E-04
23	GO:0009887: animal organ morphogenesis	9.39E-04
24	GO:0009266: response to temperature stimulus	9.39E-04
25	GO:0009414: response to water deprivation	1.03E-03
26	GO:0019953: sexual reproduction	1.23E-03
27	GO:0007017: microtubule-based process	1.23E-03
28	GO:0061077: chaperone-mediated protein folding	1.31E-03
29	GO:0010017: red or far-red light signaling pathway	1.39E-03
30	GO:0010089: xylem development	1.56E-03
31	GO:0042335: cuticle development	1.73E-03
32	GO:0000302: response to reactive oxygen species	2.09E-03
33	GO:0016042: lipid catabolic process	2.12E-03
34	GO:0009817: defense response to fungus, incompatible interaction	3.20E-03
35	GO:0034599: cellular response to oxidative stress	3.87E-03
36	GO:0051707: response to other organism	4.47E-03
37	GO:0009651: response to salt stress	4.83E-03
38	GO:0006855: drug transmembrane transport	4.96E-03
39	GO:0009585: red, far-red light phototransduction	5.48E-03
40	GO:0042744: hydrogen peroxide catabolic process	8.94E-03
41	GO:0006810: transport	1.14E-02
42	GO:0006970: response to osmotic stress	1.47E-02
43	GO:0015979: photosynthesis	1.78E-02
44	GO:0006869: lipid transport	1.97E-02
45	GO:0009873: ethylene-activated signaling pathway	2.57E-02
46	GO:0009735: response to cytokinin	3.02E-02
47	GO:0009416: response to light stimulus	3.22E-02

Rank	GO Term	Adjusted P value
1	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
2	GO:0004134: 4-alpha-glucanotransferase activity	1.67E-05
3	GO:0004645: phosphorylase activity	1.67E-05
4	GO:0008184: glycogen phosphorylase activity	1.67E-05
5	GO:0010297: heteropolysaccharide binding	4.35E-05
6	GO:0004324: ferredoxin-NADP+ reductase activity	7.77E-05
7	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.61E-04
8	GO:0003959: NADPH dehydrogenase activity	2.09E-04
9	GO:2001070: starch binding	2.59E-04
10	GO:0004130: cytochrome-c peroxidase activity	2.59E-04
11	GO:0044183: protein binding involved in protein folding	7.34E-04
12	GO:0000976: transcription regulatory region sequence-specific DNA binding	8.01E-04
13	GO:0008266: poly(U) RNA binding	9.39E-04
14	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.01E-03
15	GO:0052689: carboxylic ester hydrolase activity	1.65E-03
16	GO:0001085: RNA polymerase II transcription factor binding	1.82E-03
17	GO:0048038: quinone binding	2.09E-03
18	GO:0003924: GTPase activity	2.18E-03
19	GO:0005200: structural constituent of cytoskeleton	2.48E-03
20	GO:0004222: metalloendopeptidase activity	3.42E-03
21	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.53E-03
22	GO:0051537: 2 iron, 2 sulfur cluster binding	4.71E-03
23	GO:0016298: lipase activity	5.61E-03
24	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	6.28E-03
25	GO:0005525: GTP binding	6.28E-03
26	GO:0016746: transferase activity, transferring acyl groups	7.13E-03
27	GO:0019843: rRNA binding	8.17E-03
28	GO:0030170: pyridoxal phosphate binding	8.79E-03
29	GO:0004252: serine-type endopeptidase activity	8.79E-03
30	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	8.94E-03
31	GO:0004601: peroxidase activity	1.39E-02
32	GO:0016788: hydrolase activity, acting on ester bonds	1.41E-02
33	GO:0003682: chromatin binding	1.45E-02
34	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.99E-02
35	GO:0009055: electron carrier activity	2.25E-02
36	GO:0016740: transferase activity	3.71E-02
37	GO:0043565: sequence-specific DNA binding	3.97E-02

Rank	GO Term	Adjusted P value
1	GO:0009535: chloroplast thylakoid membrane	1.78E-07
2	GO:0009534: chloroplast thylakoid	2.20E-06
3	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	5.52E-06
4	GO:0009507: chloroplast	1.14E-05
5	GO:0045298: tubulin complex	5.42E-04
6	GO:0042651: thylakoid membrane	1.23E-03
7	GO:0009570: chloroplast stroma	2.33E-03
8	GO:0005667: transcription factor complex	2.88E-03
9	GO:0031977: thylakoid lumen	4.23E-03
10	GO:0009579: thylakoid	4.58E-03
11	GO:0009543: chloroplast thylakoid lumen	8.17E-03
12	GO:0005874: microtubule	1.58E-02
13	GO:0022625: cytosolic large ribosomal subunit	1.68E-02
14	GO:0048046: apoplast	2.83E-02
15	GO:0009941: chloroplast envelope	3.65E-02
16	GO:0031225: anchored component of membrane	4.42E-02