Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G55040

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090070: positive regulation of ribosome biogenesis0.00E+00
2GO:0039694: viral RNA genome replication0.00E+00
3GO:0018026: peptidyl-lysine monomethylation5.64E-05
4GO:0010501: RNA secondary structure unwinding7.73E-05
5GO:0009451: RNA modification7.85E-05
6GO:0048825: cotyledon development9.89E-05
7GO:0070475: rRNA base methylation9.94E-05
8GO:0045604: regulation of epidermal cell differentiation9.94E-05
9GO:0042254: ribosome biogenesis1.47E-04
10GO:0000470: maturation of LSU-rRNA3.24E-04
11GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)3.89E-04
12GO:0048444: floral organ morphogenesis3.89E-04
13GO:0010077: maintenance of inflorescence meristem identity3.89E-04
14GO:0045995: regulation of embryonic development4.56E-04
15GO:0006364: rRNA processing4.67E-04
16GO:0001522: pseudouridine synthesis5.25E-04
17GO:0009880: embryonic pattern specification5.98E-04
18GO:2000024: regulation of leaf development6.71E-04
19GO:0006349: regulation of gene expression by genetic imprinting7.48E-04
20GO:0010582: floral meristem determinacy9.89E-04
21GO:2000012: regulation of auxin polar transport1.07E-03
22GO:0009960: endosperm development2.26E-03
23GO:0051301: cell division5.81E-03
24GO:0006260: DNA replication6.39E-03
25GO:0006417: regulation of translation7.38E-03
26GO:0009790: embryo development1.15E-02
27GO:0008380: RNA splicing1.46E-02
28GO:0048366: leaf development1.98E-02
29GO:0045892: negative regulation of transcription, DNA-templated2.36E-02
30GO:0009793: embryo development ending in seed dormancy2.51E-02
31GO:0032259: methylation2.62E-02
RankGO TermAdjusted P value
1GO:0034062: 5'-3' RNA polymerase activity0.00E+00
2GO:0000166: nucleotide binding3.31E-06
3GO:0003723: RNA binding3.46E-06
4GO:0004004: ATP-dependent RNA helicase activity4.07E-06
5GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity2.19E-05
6GO:0004519: endonuclease activity2.52E-05
7GO:0008026: ATP-dependent helicase activity3.59E-05
8GO:0016279: protein-lysine N-methyltransferase activity2.04E-04
9GO:0030515: snoRNA binding4.56E-04
10GO:0003899: DNA-directed 5'-3' RNA polymerase activity4.67E-04
11GO:0043022: ribosome binding5.25E-04
12GO:0001054: RNA polymerase I activity9.07E-04
13GO:0003887: DNA-directed DNA polymerase activity1.34E-03
14GO:0005525: GTP binding8.77E-03
15GO:0004386: helicase activity9.34E-03
16GO:0008168: methyltransferase activity1.71E-02
17GO:0016787: hydrolase activity2.32E-02
18GO:0003677: DNA binding4.29E-02
19GO:0003676: nucleic acid binding4.45E-02
RankGO TermAdjusted P value
1GO:0019034: viral replication complex0.00E+00
2GO:0005730: nucleolus9.62E-09
3GO:0005634: nucleus1.56E-05
4GO:0034388: Pwp2p-containing subcomplex of 90S preribosome2.19E-05
5GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.63E-04
6GO:0005736: DNA-directed RNA polymerase I complex6.71E-04
7GO:0032040: small-subunit processome9.89E-04
8GO:0043234: protein complex1.34E-03
9GO:0042651: thylakoid membrane1.53E-03
10GO:0005834: heterotrimeric G-protein complex8.08E-03
11GO:0009506: plasmodesma4.17E-02
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Gene type



Gene DE type