GO Enrichment Analysis of Co-expressed Genes with
AT1G55040
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090070: positive regulation of ribosome biogenesis | 0.00E+00 |
| 2 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 3 | GO:0018026: peptidyl-lysine monomethylation | 5.64E-05 |
| 4 | GO:0010501: RNA secondary structure unwinding | 7.73E-05 |
| 5 | GO:0009451: RNA modification | 7.85E-05 |
| 6 | GO:0048825: cotyledon development | 9.89E-05 |
| 7 | GO:0070475: rRNA base methylation | 9.94E-05 |
| 8 | GO:0045604: regulation of epidermal cell differentiation | 9.94E-05 |
| 9 | GO:0042254: ribosome biogenesis | 1.47E-04 |
| 10 | GO:0000470: maturation of LSU-rRNA | 3.24E-04 |
| 11 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.89E-04 |
| 12 | GO:0048444: floral organ morphogenesis | 3.89E-04 |
| 13 | GO:0010077: maintenance of inflorescence meristem identity | 3.89E-04 |
| 14 | GO:0045995: regulation of embryonic development | 4.56E-04 |
| 15 | GO:0006364: rRNA processing | 4.67E-04 |
| 16 | GO:0001522: pseudouridine synthesis | 5.25E-04 |
| 17 | GO:0009880: embryonic pattern specification | 5.98E-04 |
| 18 | GO:2000024: regulation of leaf development | 6.71E-04 |
| 19 | GO:0006349: regulation of gene expression by genetic imprinting | 7.48E-04 |
| 20 | GO:0010582: floral meristem determinacy | 9.89E-04 |
| 21 | GO:2000012: regulation of auxin polar transport | 1.07E-03 |
| 22 | GO:0009960: endosperm development | 2.26E-03 |
| 23 | GO:0051301: cell division | 5.81E-03 |
| 24 | GO:0006260: DNA replication | 6.39E-03 |
| 25 | GO:0006417: regulation of translation | 7.38E-03 |
| 26 | GO:0009790: embryo development | 1.15E-02 |
| 27 | GO:0008380: RNA splicing | 1.46E-02 |
| 28 | GO:0048366: leaf development | 1.98E-02 |
| 29 | GO:0045892: negative regulation of transcription, DNA-templated | 2.36E-02 |
| 30 | GO:0009793: embryo development ending in seed dormancy | 2.51E-02 |
| 31 | GO:0032259: methylation | 2.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034062: 5'-3' RNA polymerase activity | 0.00E+00 |
| 2 | GO:0000166: nucleotide binding | 3.31E-06 |
| 3 | GO:0003723: RNA binding | 3.46E-06 |
| 4 | GO:0004004: ATP-dependent RNA helicase activity | 4.07E-06 |
| 5 | GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity | 2.19E-05 |
| 6 | GO:0004519: endonuclease activity | 2.52E-05 |
| 7 | GO:0008026: ATP-dependent helicase activity | 3.59E-05 |
| 8 | GO:0016279: protein-lysine N-methyltransferase activity | 2.04E-04 |
| 9 | GO:0030515: snoRNA binding | 4.56E-04 |
| 10 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.67E-04 |
| 11 | GO:0043022: ribosome binding | 5.25E-04 |
| 12 | GO:0001054: RNA polymerase I activity | 9.07E-04 |
| 13 | GO:0003887: DNA-directed DNA polymerase activity | 1.34E-03 |
| 14 | GO:0005525: GTP binding | 8.77E-03 |
| 15 | GO:0004386: helicase activity | 9.34E-03 |
| 16 | GO:0008168: methyltransferase activity | 1.71E-02 |
| 17 | GO:0016787: hydrolase activity | 2.32E-02 |
| 18 | GO:0003677: DNA binding | 4.29E-02 |
| 19 | GO:0003676: nucleic acid binding | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 9.62E-09 |
| 3 | GO:0005634: nucleus | 1.56E-05 |
| 4 | GO:0034388: Pwp2p-containing subcomplex of 90S preribosome | 2.19E-05 |
| 5 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.63E-04 |
| 6 | GO:0005736: DNA-directed RNA polymerase I complex | 6.71E-04 |
| 7 | GO:0032040: small-subunit processome | 9.89E-04 |
| 8 | GO:0043234: protein complex | 1.34E-03 |
| 9 | GO:0042651: thylakoid membrane | 1.53E-03 |
| 10 | GO:0005834: heterotrimeric G-protein complex | 8.08E-03 |
| 11 | GO:0009506: plasmodesma | 4.17E-02 |