Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G54970

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0060416: response to growth hormone0.00E+00
2GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
3GO:0009873: ethylene-activated signaling pathway4.79E-05
4GO:0006970: response to osmotic stress6.91E-05
5GO:0046208: spermine catabolic process1.31E-04
6GO:0051180: vitamin transport1.31E-04
7GO:0030974: thiamine pyrophosphate transport1.31E-04
8GO:0018107: peptidyl-threonine phosphorylation2.95E-04
9GO:1901679: nucleotide transmembrane transport3.03E-04
10GO:0015786: UDP-glucose transport3.03E-04
11GO:0080148: negative regulation of response to water deprivation3.03E-04
12GO:0010507: negative regulation of autophagy3.03E-04
13GO:0031407: oxylipin metabolic process3.03E-04
14GO:0010289: homogalacturonan biosynthetic process3.03E-04
15GO:0015893: drug transport3.03E-04
16GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid4.99E-04
17GO:0015783: GDP-fucose transport4.99E-04
18GO:0006598: polyamine catabolic process4.99E-04
19GO:0080121: AMP transport4.99E-04
20GO:0009695: jasmonic acid biosynthetic process5.12E-04
21GO:0031408: oxylipin biosynthetic process5.61E-04
22GO:0009611: response to wounding6.25E-04
23GO:0006624: vacuolar protein processing7.14E-04
24GO:0010371: regulation of gibberellin biosynthetic process7.14E-04
25GO:0072334: UDP-galactose transmembrane transport7.14E-04
26GO:0080170: hydrogen peroxide transmembrane transport7.14E-04
27GO:0015700: arsenite transport7.14E-04
28GO:0006749: glutathione metabolic process9.47E-04
29GO:0015867: ATP transport9.47E-04
30GO:0006665: sphingolipid metabolic process1.20E-03
31GO:0032957: inositol trisphosphate metabolic process1.20E-03
32GO:0009247: glycolipid biosynthetic process1.20E-03
33GO:0045487: gibberellin catabolic process1.20E-03
34GO:0019760: glucosinolate metabolic process1.33E-03
35GO:1900425: negative regulation of defense response to bacterium1.47E-03
36GO:0015866: ADP transport1.47E-03
37GO:0045962: positive regulation of development, heterochronic1.47E-03
38GO:0035435: phosphate ion transmembrane transport1.47E-03
39GO:0098655: cation transmembrane transport1.76E-03
40GO:0009414: response to water deprivation1.97E-03
41GO:1900057: positive regulation of leaf senescence2.06E-03
42GO:0009737: response to abscisic acid2.22E-03
43GO:0019375: galactolipid biosynthetic process2.39E-03
44GO:0009415: response to water2.39E-03
45GO:0009704: de-etiolation2.39E-03
46GO:0007155: cell adhesion2.39E-03
47GO:0006839: mitochondrial transport2.94E-03
48GO:0006631: fatty acid metabolic process3.07E-03
49GO:0010345: suberin biosynthetic process3.08E-03
50GO:0098656: anion transmembrane transport3.08E-03
51GO:0046685: response to arsenic-containing substance3.08E-03
52GO:0051707: response to other organism3.32E-03
53GO:2000280: regulation of root development3.46E-03
54GO:0006535: cysteine biosynthetic process from serine3.84E-03
55GO:0009641: shade avoidance3.84E-03
56GO:0055062: phosphate ion homeostasis3.84E-03
57GO:0042538: hyperosmotic salinity response4.17E-03
58GO:0018119: peptidyl-cysteine S-nitrosylation4.24E-03
59GO:0000038: very long-chain fatty acid metabolic process4.24E-03
60GO:0009698: phenylpropanoid metabolic process4.24E-03
61GO:0006351: transcription, DNA-templated4.97E-03
62GO:0050826: response to freezing5.08E-03
63GO:0070588: calcium ion transmembrane transport5.97E-03
64GO:0009751: response to salicylic acid6.13E-03
65GO:0009624: response to nematode6.35E-03
66GO:0009833: plant-type primary cell wall biogenesis6.43E-03
67GO:0018105: peptidyl-serine phosphorylation6.54E-03
68GO:0019344: cysteine biosynthetic process6.91E-03
69GO:0009269: response to desiccation7.91E-03
70GO:0009686: gibberellin biosynthetic process8.95E-03
71GO:0009790: embryo development9.28E-03
72GO:0048443: stamen development9.49E-03
73GO:0045492: xylan biosynthetic process9.49E-03
74GO:0006633: fatty acid biosynthetic process1.00E-02
75GO:0042335: cuticle development1.06E-02
76GO:0045490: pectin catabolic process1.10E-02
77GO:0048868: pollen tube development1.12E-02
78GO:0006814: sodium ion transport1.18E-02
79GO:0009749: response to glucose1.24E-02
80GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.30E-02
81GO:0010193: response to ozone1.30E-02
82GO:0009409: response to cold1.31E-02
83GO:0010468: regulation of gene expression1.31E-02
84GO:0035556: intracellular signal transduction1.39E-02
85GO:1901657: glycosyl compound metabolic process1.42E-02
86GO:0009639: response to red or far red light1.49E-02
87GO:0005975: carbohydrate metabolic process1.55E-02
88GO:0010286: heat acclimation1.55E-02
89GO:0010027: thylakoid membrane organization1.68E-02
90GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.75E-02
91GO:0010029: regulation of seed germination1.75E-02
92GO:0055085: transmembrane transport1.75E-02
93GO:0016049: cell growth1.96E-02
94GO:0080167: response to karrikin2.12E-02
95GO:0009834: plant-type secondary cell wall biogenesis2.18E-02
96GO:0009407: toxin catabolic process2.18E-02
97GO:0010200: response to chitin2.19E-02
98GO:0009631: cold acclimation2.25E-02
99GO:0048527: lateral root development2.25E-02
100GO:0006865: amino acid transport2.33E-02
101GO:0009640: photomorphogenesis2.88E-02
102GO:0008283: cell proliferation2.88E-02
103GO:0009636: response to toxic substance3.13E-02
104GO:0009965: leaf morphogenesis3.13E-02
105GO:0006855: drug transmembrane transport3.22E-02
106GO:0000165: MAPK cascade3.30E-02
107GO:0006812: cation transport3.39E-02
108GO:0030154: cell differentiation3.49E-02
109GO:0009809: lignin biosynthetic process3.56E-02
110GO:0006813: potassium ion transport3.56E-02
111GO:0006355: regulation of transcription, DNA-templated3.58E-02
112GO:0009733: response to auxin3.63E-02
113GO:0051603: proteolysis involved in cellular protein catabolic process3.65E-02
114GO:0055114: oxidation-reduction process3.89E-02
115GO:0048367: shoot system development4.11E-02
116GO:0050832: defense response to fungus4.16E-02
117GO:0009620: response to fungus4.29E-02
118GO:0042545: cell wall modification4.48E-02
119GO:0009651: response to salt stress4.95E-02
RankGO TermAdjusted P value
1GO:0052903: N1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity0.00E+00
2GO:0052902: spermidine:oxygen oxidoreductase (3-aminopropanal-forming) activity0.00E+00
3GO:0008419: RNA lariat debranching enzyme activity0.00E+00
4GO:0052904: N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity0.00E+00
5GO:0016629: 12-oxophytodienoate reductase activity8.68E-07
6GO:0009922: fatty acid elongase activity2.35E-05
7GO:0010181: FMN binding6.15E-05
8GO:0090422: thiamine pyrophosphate transporter activity1.31E-04
9GO:0015297: antiporter activity2.20E-04
10GO:0001047: core promoter binding3.03E-04
11GO:0017040: ceramidase activity3.03E-04
12GO:0003958: NADPH-hemoprotein reductase activity3.03E-04
13GO:0015105: arsenite transmembrane transporter activity3.03E-04
14GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity3.03E-04
15GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity3.03E-04
16GO:0102337: 3-oxo-cerotoyl-CoA synthase activity4.19E-04
17GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity4.19E-04
18GO:0102336: 3-oxo-arachidoyl-CoA synthase activity4.19E-04
19GO:0046423: allene-oxide cyclase activity4.99E-04
20GO:0005457: GDP-fucose transmembrane transporter activity4.99E-04
21GO:0047325: inositol tetrakisphosphate 1-kinase activity4.99E-04
22GO:0046592: polyamine oxidase activity4.99E-04
23GO:0070330: aromatase activity4.99E-04
24GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity4.99E-04
25GO:0005460: UDP-glucose transmembrane transporter activity7.14E-04
26GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity7.14E-04
27GO:0009001: serine O-acetyltransferase activity7.14E-04
28GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity7.14E-04
29GO:0005432: calcium:sodium antiporter activity7.14E-04
30GO:0035250: UDP-galactosyltransferase activity7.14E-04
31GO:0018685: alkane 1-monooxygenase activity1.20E-03
32GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.20E-03
33GO:0005459: UDP-galactose transmembrane transporter activity1.20E-03
34GO:0080122: AMP transmembrane transporter activity1.20E-03
35GO:0005347: ATP transmembrane transporter activity1.76E-03
36GO:0015217: ADP transmembrane transporter activity1.76E-03
37GO:0044212: transcription regulatory region DNA binding2.06E-03
38GO:0016621: cinnamoyl-CoA reductase activity2.06E-03
39GO:0015491: cation:cation antiporter activity2.39E-03
40GO:0043565: sequence-specific DNA binding4.18E-03
41GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.32E-03
42GO:0003700: transcription factor activity, sequence-specific DNA binding4.56E-03
43GO:0005262: calcium channel activity5.08E-03
44GO:0015114: phosphate ion transmembrane transporter activity5.08E-03
45GO:0042973: glucan endo-1,3-beta-D-glucosidase activity5.52E-03
46GO:0008083: growth factor activity5.52E-03
47GO:0008146: sulfotransferase activity5.97E-03
48GO:0004857: enzyme inhibitor activity6.91E-03
49GO:0051087: chaperone binding7.40E-03
50GO:0004707: MAP kinase activity7.91E-03
51GO:0030570: pectate lyase activity8.95E-03
52GO:0004872: receptor activity1.24E-02
53GO:0004197: cysteine-type endopeptidase activity1.36E-02
54GO:0003677: DNA binding1.56E-02
55GO:0015250: water channel activity1.68E-02
56GO:0102483: scopolin beta-glucosidase activity1.89E-02
57GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.96E-02
58GO:0015238: drug transmembrane transporter activity2.11E-02
59GO:0008422: beta-glucosidase activity2.56E-02
60GO:0004712: protein serine/threonine/tyrosine kinase activity2.56E-02
61GO:0004722: protein serine/threonine phosphatase activity2.78E-02
62GO:0004364: glutathione transferase activity2.80E-02
63GO:0015171: amino acid transmembrane transporter activity3.83E-02
64GO:0045330: aspartyl esterase activity3.83E-02
65GO:0080043: quercetin 3-O-glucosyltransferase activity4.29E-02
66GO:0080044: quercetin 7-O-glucosyltransferase activity4.29E-02
67GO:0030599: pectinesterase activity4.39E-02
68GO:0022857: transmembrane transporter activity4.39E-02
RankGO TermAdjusted P value
1GO:0031225: anchored component of membrane5.56E-03
2GO:0005743: mitochondrial inner membrane5.69E-03
3GO:0005622: intracellular6.78E-03
4GO:0046658: anchored component of plasma membrane1.46E-02
5GO:0000139: Golgi membrane4.56E-02
6GO:0009706: chloroplast inner membrane4.58E-02
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Gene type



Gene DE type