Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G54820

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0061157: mRNA destabilization0.00E+00
2GO:0042493: response to drug0.00E+00
3GO:0080181: lateral root branching1.30E-04
4GO:0005977: glycogen metabolic process2.22E-04
5GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity3.25E-04
6GO:0009650: UV protection3.25E-04
7GO:0009226: nucleotide-sugar biosynthetic process3.25E-04
8GO:0040008: regulation of growth3.48E-04
9GO:0051781: positive regulation of cell division4.35E-04
10GO:0022622: root system development4.35E-04
11GO:0010021: amylopectin biosynthetic process4.35E-04
12GO:0005975: carbohydrate metabolic process5.02E-04
13GO:0010158: abaxial cell fate specification5.52E-04
14GO:0016558: protein import into peroxisome matrix5.52E-04
15GO:0010050: vegetative phase change9.40E-04
16GO:0010103: stomatal complex morphogenesis9.40E-04
17GO:0032880: regulation of protein localization9.40E-04
18GO:0070413: trehalose metabolism in response to stress1.08E-03
19GO:0009850: auxin metabolic process1.08E-03
20GO:0010492: maintenance of shoot apical meristem identity1.08E-03
21GO:0009664: plant-type cell wall organization1.28E-03
22GO:0006098: pentose-phosphate shunt1.38E-03
23GO:0048507: meristem development1.38E-03
24GO:0009733: response to auxin1.55E-03
25GO:0006949: syncytium formation1.71E-03
26GO:0009740: gibberellic acid mediated signaling pathway1.82E-03
27GO:0009553: embryo sac development1.88E-03
28GO:0009773: photosynthetic electron transport in photosystem I1.88E-03
29GO:0009750: response to fructose1.88E-03
30GO:0009742: brassinosteroid mediated signaling pathway2.05E-03
31GO:0010582: floral meristem determinacy2.06E-03
32GO:0009734: auxin-activated signaling pathway2.08E-03
33GO:0006094: gluconeogenesis2.25E-03
34GO:2000012: regulation of auxin polar transport2.25E-03
35GO:0010628: positive regulation of gene expression2.25E-03
36GO:0006302: double-strand break repair2.43E-03
37GO:0010030: positive regulation of seed germination2.63E-03
38GO:0005992: trehalose biosynthetic process3.03E-03
39GO:0009451: RNA modification3.38E-03
40GO:0048511: rhythmic process3.46E-03
41GO:0051321: meiotic cell cycle3.46E-03
42GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.90E-03
43GO:0009411: response to UV3.90E-03
44GO:0006284: base-excision repair4.13E-03
45GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.36E-03
46GO:0008284: positive regulation of cell proliferation4.36E-03
47GO:0042631: cellular response to water deprivation4.60E-03
48GO:0009741: response to brassinosteroid4.84E-03
49GO:0009958: positive gravitropism4.84E-03
50GO:0048868: pollen tube development4.84E-03
51GO:0046323: glucose import4.84E-03
52GO:0009826: unidimensional cell growth4.90E-03
53GO:0042752: regulation of circadian rhythm5.09E-03
54GO:0009749: response to glucose5.34E-03
55GO:0019252: starch biosynthetic process5.34E-03
56GO:0048510: regulation of timing of transition from vegetative to reproductive phase5.60E-03
57GO:0006635: fatty acid beta-oxidation5.60E-03
58GO:0032502: developmental process5.86E-03
59GO:0009828: plant-type cell wall loosening6.39E-03
60GO:0015979: photosynthesis7.20E-03
61GO:0001666: response to hypoxia7.22E-03
62GO:0010411: xyloglucan metabolic process8.09E-03
63GO:0048481: plant ovule development8.68E-03
64GO:0006281: DNA repair9.31E-03
65GO:0048527: lateral root development9.61E-03
66GO:0008152: metabolic process1.03E-02
67GO:0006839: mitochondrial transport1.12E-02
68GO:0009640: photomorphogenesis1.23E-02
69GO:0009744: response to sucrose1.23E-02
70GO:0042546: cell wall biogenesis1.26E-02
71GO:0007275: multicellular organism development1.60E-02
72GO:0006096: glycolytic process1.70E-02
73GO:0007165: signal transduction1.73E-02
74GO:0048316: seed development1.74E-02
75GO:0009790: embryo development2.55E-02
76GO:0009739: response to gibberellin3.11E-02
77GO:0007166: cell surface receptor signaling pathway3.15E-02
78GO:0080167: response to karrikin4.56E-02
79GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.67E-02
80GO:0044550: secondary metabolite biosynthetic process4.84E-02
81GO:0006355: regulation of transcription, DNA-templated4.88E-02
RankGO TermAdjusted P value
1GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
2GO:0042623: ATPase activity, coupled0.00E+00
3GO:0019156: isoamylase activity1.30E-04
4GO:0005354: galactose transmembrane transporter activity3.25E-04
5GO:0008725: DNA-3-methyladenine glycosylase activity5.52E-04
6GO:0004332: fructose-bisphosphate aldolase activity6.76E-04
7GO:0042578: phosphoric ester hydrolase activity6.76E-04
8GO:0004556: alpha-amylase activity6.76E-04
9GO:0004462: lactoylglutathione lyase activity6.76E-04
10GO:0004519: endonuclease activity1.50E-03
11GO:0003824: catalytic activity1.50E-03
12GO:0015020: glucuronosyltransferase activity1.71E-03
13GO:0004805: trehalose-phosphatase activity1.71E-03
14GO:0004565: beta-galactosidase activity2.25E-03
15GO:0008083: growth factor activity2.43E-03
16GO:0008408: 3'-5' exonuclease activity3.46E-03
17GO:0003727: single-stranded RNA binding4.13E-03
18GO:0005355: glucose transmembrane transporter activity5.09E-03
19GO:0016762: xyloglucan:xyloglucosyl transferase activity5.60E-03
20GO:0016791: phosphatase activity6.39E-03
21GO:0016798: hydrolase activity, acting on glycosyl bonds8.09E-03
22GO:0005096: GTPase activator activity8.99E-03
23GO:0030145: manganese ion binding9.61E-03
24GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.37E-02
25GO:0080043: quercetin 3-O-glucosyltransferase activity1.82E-02
26GO:0080044: quercetin 7-O-glucosyltransferase activity1.82E-02
27GO:0016874: ligase activity1.86E-02
28GO:0003700: transcription factor activity, sequence-specific DNA binding1.88E-02
29GO:0030246: carbohydrate binding2.23E-02
30GO:0016758: transferase activity, transferring hexosyl groups2.24E-02
31GO:0019843: rRNA binding2.28E-02
32GO:0016829: lyase activity2.41E-02
33GO:0015144: carbohydrate transmembrane transporter activity2.59E-02
34GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.73E-02
35GO:0005351: sugar:proton symporter activity2.82E-02
36GO:0008194: UDP-glycosyltransferase activity3.11E-02
37GO:0016491: oxidoreductase activity4.41E-02
38GO:0046983: protein dimerization activity4.47E-02
RankGO TermAdjusted P value
1GO:0010368: chloroplast isoamylase complex0.00E+00
2GO:0000791: euchromatin5.34E-05
3GO:0030870: Mre11 complex1.30E-04
4GO:0009531: secondary cell wall3.25E-04
5GO:0000795: synaptonemal complex5.52E-04
6GO:0009538: photosystem I reaction center1.08E-03
7GO:0009543: chloroplast thylakoid lumen2.41E-03
8GO:0009654: photosystem II oxygen evolving complex3.24E-03
9GO:0019898: extrinsic component of membrane5.34E-03
10GO:0000785: chromatin5.86E-03
11GO:0009507: chloroplast6.59E-03
12GO:0005778: peroxisomal membrane6.66E-03
13GO:0043231: intracellular membrane-bounded organelle1.03E-02
14GO:0005618: cell wall1.05E-02
15GO:0005773: vacuole1.63E-02
16GO:0009579: thylakoid1.98E-02
17GO:0005615: extracellular space3.11E-02
18GO:0048046: apoplast3.46E-02
19GO:0009505: plant-type cell wall4.20E-02
20GO:0016020: membrane4.22E-02
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Gene type



Gene DE type