GO Enrichment Analysis of Co-expressed Genes with
AT1G54360
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 2 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 3 | GO:0006432: phenylalanyl-tRNA aminoacylation | 3.65E-05 |
| 4 | GO:0046417: chorismate metabolic process | 6.55E-05 |
| 5 | GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid | 6.55E-05 |
| 6 | GO:0046168: glycerol-3-phosphate catabolic process | 6.55E-05 |
| 7 | GO:0008333: endosome to lysosome transport | 6.55E-05 |
| 8 | GO:0006072: glycerol-3-phosphate metabolic process | 9.94E-05 |
| 9 | GO:0009755: hormone-mediated signaling pathway | 1.37E-04 |
| 10 | GO:0010387: COP9 signalosome assembly | 1.37E-04 |
| 11 | GO:0034314: Arp2/3 complex-mediated actin nucleation | 2.22E-04 |
| 12 | GO:0006014: D-ribose metabolic process | 2.22E-04 |
| 13 | GO:0000338: protein deneddylation | 3.15E-04 |
| 14 | GO:0006526: arginine biosynthetic process | 4.16E-04 |
| 15 | GO:0010204: defense response signaling pathway, resistance gene-independent | 4.16E-04 |
| 16 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 5.78E-04 |
| 17 | GO:0009073: aromatic amino acid family biosynthetic process | 6.34E-04 |
| 18 | GO:0007015: actin filament organization | 8.13E-04 |
| 19 | GO:0034976: response to endoplasmic reticulum stress | 9.38E-04 |
| 20 | GO:0042147: retrograde transport, endosome to Golgi | 1.41E-03 |
| 21 | GO:0010182: sugar mediated signaling pathway | 1.56E-03 |
| 22 | GO:0010154: fruit development | 1.56E-03 |
| 23 | GO:0048825: cotyledon development | 1.72E-03 |
| 24 | GO:0009749: response to glucose | 1.72E-03 |
| 25 | GO:0009627: systemic acquired resistance | 2.48E-03 |
| 26 | GO:0045087: innate immune response | 3.22E-03 |
| 27 | GO:0009585: red, far-red light phototransduction | 4.69E-03 |
| 28 | GO:0016569: covalent chromatin modification | 5.74E-03 |
| 29 | GO:0042742: defense response to bacterium | 6.16E-03 |
| 30 | GO:0000398: mRNA splicing, via spliceosome | 6.60E-03 |
| 31 | GO:0010468: regulation of gene expression | 9.90E-03 |
| 32 | GO:0048366: leaf development | 1.33E-02 |
| 33 | GO:0045454: cell redox homeostasis | 1.57E-02 |
| 34 | GO:0045892: negative regulation of transcription, DNA-templated | 1.59E-02 |
| 35 | GO:0006886: intracellular protein transport | 1.61E-02 |
| 36 | GO:0006281: DNA repair | 1.82E-02 |
| 37 | GO:0048364: root development | 1.88E-02 |
| 38 | GO:0006508: proteolysis | 1.90E-02 |
| 39 | GO:0009611: response to wounding | 2.79E-02 |
| 40 | GO:0035556: intracellular signal transduction | 2.85E-02 |
| 41 | GO:0045893: positive regulation of transcription, DNA-templated | 3.03E-02 |
| 42 | GO:0055085: transmembrane transport | 3.25E-02 |
| 43 | GO:0006457: protein folding | 3.30E-02 |
| 44 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.41E-02 |
| 45 | GO:0006952: defense response | 3.43E-02 |
| 46 | GO:0009414: response to water deprivation | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 2 | GO:1990585: hydroxyproline O-arabinosyltransferase activity | 3.65E-05 |
| 3 | GO:0004106: chorismate mutase activity | 3.65E-05 |
| 4 | GO:0004826: phenylalanine-tRNA ligase activity | 3.65E-05 |
| 5 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 6.55E-05 |
| 6 | GO:0004747: ribokinase activity | 2.68E-04 |
| 7 | GO:0042162: telomeric DNA binding | 3.15E-04 |
| 8 | GO:0035064: methylated histone binding | 3.65E-04 |
| 9 | GO:0008559: xenobiotic-transporting ATPase activity | 6.34E-04 |
| 10 | GO:0000049: tRNA binding | 6.93E-04 |
| 11 | GO:0003714: transcription corepressor activity | 1.00E-03 |
| 12 | GO:0003756: protein disulfide isomerase activity | 1.34E-03 |
| 13 | GO:0051015: actin filament binding | 1.96E-03 |
| 14 | GO:0008237: metallopeptidase activity | 2.13E-03 |
| 15 | GO:0008375: acetylglucosaminyltransferase activity | 2.48E-03 |
| 16 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.94E-03 |
| 17 | GO:0000166: nucleotide binding | 3.06E-03 |
| 18 | GO:0003697: single-stranded DNA binding | 3.22E-03 |
| 19 | GO:0042393: histone binding | 3.52E-03 |
| 20 | GO:0051287: NAD binding | 4.36E-03 |
| 21 | GO:0008565: protein transporter activity | 7.91E-03 |
| 22 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.03E-02 |
| 23 | GO:0016757: transferase activity, transferring glycosyl groups | 2.10E-02 |
| 24 | GO:0016740: transferase activity | 3.16E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005662: DNA replication factor A complex | 1.39E-05 |
| 2 | GO:0005697: telomerase holoenzyme complex | 3.65E-05 |
| 3 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 9.94E-05 |
| 4 | GO:0000974: Prp19 complex | 2.22E-04 |
| 5 | GO:0005771: multivesicular body | 2.22E-04 |
| 6 | GO:0030904: retromer complex | 2.22E-04 |
| 7 | GO:0005885: Arp2/3 protein complex | 2.68E-04 |
| 8 | GO:0005801: cis-Golgi network | 2.68E-04 |
| 9 | GO:0008180: COP9 signalosome | 4.68E-04 |
| 10 | GO:0071011: precatalytic spliceosome | 5.23E-04 |
| 11 | GO:0071013: catalytic step 2 spliceosome | 6.34E-04 |
| 12 | GO:0009508: plastid chromosome | 7.52E-04 |
| 13 | GO:0009295: nucleoid | 2.13E-03 |
| 14 | GO:0000325: plant-type vacuole | 3.03E-03 |
| 15 | GO:0031902: late endosome membrane | 3.63E-03 |
| 16 | GO:0005774: vacuolar membrane | 3.75E-03 |
| 17 | GO:0005732: small nucleolar ribonucleoprotein complex | 6.35E-03 |
| 18 | GO:0005794: Golgi apparatus | 7.49E-03 |
| 19 | GO:0005783: endoplasmic reticulum | 9.13E-03 |
| 20 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.27E-02 |
| 21 | GO:0043231: intracellular membrane-bounded organelle | 1.95E-02 |
| 22 | GO:0005737: cytoplasm | 2.26E-02 |
| 23 | GO:0005802: trans-Golgi network | 3.84E-02 |
| 24 | GO:0005768: endosome | 4.21E-02 |
| 25 | GO:0005829: cytosol | 4.41E-02 |