co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G53920

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006862: nucleotide transport	0.00E+00
2	GO:2001142: nicotinate transport	0.00E+00
3	GO:0060416: response to growth hormone	0.00E+00
4	GO:0046967: cytosol to ER transport	0.00E+00
5	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
6	GO:2001143: N-methylnicotinate transport	0.00E+00
7	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
8	GO:1903086: negative regulation of sinapate ester biosynthetic process	0.00E+00
9	GO:0010200: response to chitin	2.40E-09
10	GO:0002679: respiratory burst involved in defense response	2.04E-05
11	GO:0009611: response to wounding	1.32E-04
12	GO:0051180: vitamin transport	2.29E-04
13	GO:0007229: integrin-mediated signaling pathway	2.29E-04
14	GO:0030974: thiamine pyrophosphate transport	2.29E-04
15	GO:0080157: regulation of plant-type cell wall organization or biogenesis	2.29E-04
16	GO:0051865: protein autoubiquitination	3.04E-04
17	GO:0046777: protein autophosphorylation	4.96E-04
18	GO:0015893: drug transport	5.10E-04
19	GO:0006741: NADP biosynthetic process	5.10E-04
20	GO:0042939: tripeptide transport	5.10E-04
21	GO:0080148: negative regulation of response to water deprivation	5.10E-04
22	GO:0046939: nucleotide phosphorylation	5.10E-04
23	GO:0042754: negative regulation of circadian rhythm	5.10E-04
24	GO:0006952: defense response	6.03E-04
25	GO:0006468: protein phosphorylation	6.27E-04
26	GO:0006979: response to oxidative stress	6.87E-04
27	GO:0006598: polyamine catabolic process	8.29E-04
28	GO:0080168: abscisic acid transport	8.29E-04
29	GO:0048513: animal organ development	8.29E-04
30	GO:0019674: NAD metabolic process	8.29E-04
31	GO:0009695: jasmonic acid biosynthetic process	1.08E-03
32	GO:0009399: nitrogen fixation	1.18E-03
33	GO:0033014: tetrapyrrole biosynthetic process	1.18E-03
34	GO:0048530: fruit morphogenesis	1.18E-03
35	GO:0046513: ceramide biosynthetic process	1.18E-03
36	GO:0019363: pyridine nucleotide biosynthetic process	1.18E-03
37	GO:0043207: response to external biotic stimulus	1.18E-03
38	GO:0009809: lignin biosynthetic process	1.44E-03
39	GO:0006749: glutathione metabolic process	1.57E-03
40	GO:0034440: lipid oxidation	1.57E-03
41	GO:0010107: potassium ion import	1.57E-03
42	GO:1902347: response to strigolactone	1.57E-03
43	GO:0042938: dipeptide transport	1.57E-03
44	GO:0006085: acetyl-CoA biosynthetic process	1.57E-03
45	GO:0009164: nucleoside catabolic process	2.01E-03
46	GO:0045487: gibberellin catabolic process	2.01E-03
47	GO:2000762: regulation of phenylpropanoid metabolic process	2.01E-03
48	GO:0048544: recognition of pollen	2.06E-03
49	GO:0006828: manganese ion transport	2.48E-03
50	GO:1900425: negative regulation of defense response to bacterium	2.48E-03
51	GO:0015691: cadmium ion transport	2.48E-03
52	GO:0006751: glutathione catabolic process	2.48E-03
53	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.48E-03
54	GO:0080086: stamen filament development	2.97E-03
55	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.97E-03
56	GO:0015937: coenzyme A biosynthetic process	3.50E-03
57	GO:1900057: positive regulation of leaf senescence	3.50E-03
58	GO:0010161: red light signaling pathway	3.50E-03
59	GO:0006955: immune response	3.50E-03
60	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.60E-03
61	GO:0015031: protein transport	3.83E-03
62	GO:0009704: de-etiolation	4.06E-03
63	GO:2000070: regulation of response to water deprivation	4.06E-03
64	GO:0045010: actin nucleation	4.06E-03
65	GO:0009753: response to jasmonic acid	4.37E-03
66	GO:0048193: Golgi vesicle transport	4.65E-03
67	GO:0009699: phenylpropanoid biosynthetic process	4.65E-03
68	GO:0009932: cell tip growth	4.65E-03
69	GO:0048527: lateral root development	5.13E-03
70	GO:0090333: regulation of stomatal closure	5.27E-03
71	GO:0006783: heme biosynthetic process	5.27E-03
72	GO:0007166: cell surface receptor signaling pathway	5.35E-03
73	GO:0045087: innate immune response	5.62E-03
74	GO:0009617: response to bacterium	5.65E-03
75	GO:0009086: methionine biosynthetic process	5.91E-03
76	GO:0042761: very long-chain fatty acid biosynthetic process	5.91E-03
77	GO:0008202: steroid metabolic process	5.91E-03
78	GO:0006779: porphyrin-containing compound biosynthetic process	5.91E-03
79	GO:0006839: mitochondrial transport	6.41E-03
80	GO:0006782: protoporphyrinogen IX biosynthetic process	6.58E-03
81	GO:0019538: protein metabolic process	6.58E-03
82	GO:0009688: abscisic acid biosynthetic process	6.58E-03
83	GO:0048829: root cap development	6.58E-03
84	GO:0015770: sucrose transport	7.28E-03
85	GO:1903507: negative regulation of nucleic acid-templated transcription	7.28E-03
86	GO:0010015: root morphogenesis	7.28E-03
87	GO:0006816: calcium ion transport	7.28E-03
88	GO:0016567: protein ubiquitination	7.60E-03
89	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	8.00E-03
90	GO:0006855: drug transmembrane transport	8.46E-03
91	GO:0006970: response to osmotic stress	8.63E-03
92	GO:0006807: nitrogen compound metabolic process	8.75E-03
93	GO:0055046: microgametogenesis	8.75E-03
94	GO:0010224: response to UV-B	1.01E-02
95	GO:0009901: anther dehiscence	1.03E-02
96	GO:0005985: sucrose metabolic process	1.03E-02
97	GO:0071732: cellular response to nitric oxide	1.03E-02
98	GO:0006857: oligopeptide transport	1.05E-02
99	GO:0009737: response to abscisic acid	1.05E-02
100	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.08E-02
101	GO:0045893: positive regulation of transcription, DNA-templated	1.16E-02
102	GO:0009620: response to fungus	1.27E-02
103	GO:0031408: oxylipin biosynthetic process	1.37E-02
104	GO:0016998: cell wall macromolecule catabolic process	1.37E-02
105	GO:0098542: defense response to other organism	1.37E-02
106	GO:0016226: iron-sulfur cluster assembly	1.46E-02
107	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.46E-02
108	GO:0030245: cellulose catabolic process	1.46E-02
109	GO:0071215: cellular response to abscisic acid stimulus	1.56E-02
110	GO:0009686: gibberellin biosynthetic process	1.56E-02
111	GO:0071369: cellular response to ethylene stimulus	1.56E-02
112	GO:0040007: growth	1.56E-02
113	GO:0019722: calcium-mediated signaling	1.65E-02
114	GO:0006817: phosphate ion transport	1.65E-02
115	GO:0009306: protein secretion	1.65E-02
116	GO:0042147: retrograde transport, endosome to Golgi	1.75E-02
117	GO:0010118: stomatal movement	1.85E-02
118	GO:0048653: anther development	1.85E-02
119	GO:0042631: cellular response to water deprivation	1.85E-02
120	GO:0009958: positive gravitropism	1.95E-02
121	GO:0009749: response to glucose	2.16E-02
122	GO:0009851: auxin biosynthetic process	2.16E-02
123	GO:0002229: defense response to oomycetes	2.27E-02
124	GO:0010193: response to ozone	2.27E-02
125	GO:0006891: intra-Golgi vesicle-mediated transport	2.27E-02
126	GO:0007623: circadian rhythm	2.42E-02
127	GO:0071281: cellular response to iron ion	2.48E-02
128	GO:1901657: glycosyl compound metabolic process	2.48E-02
129	GO:0009414: response to water deprivation	2.60E-02
130	GO:0009639: response to red or far red light	2.60E-02
131	GO:0019760: glucosinolate metabolic process	2.60E-02
132	GO:0042742: defense response to bacterium	2.70E-02
133	GO:0006470: protein dephosphorylation	2.77E-02
134	GO:0001666: response to hypoxia	2.94E-02
135	GO:0009607: response to biotic stimulus	3.06E-02
136	GO:0015995: chlorophyll biosynthetic process	3.31E-02
137	GO:0048573: photoperiodism, flowering	3.31E-02
138	GO:0009555: pollen development	3.48E-02
139	GO:0008219: cell death	3.56E-02
140	GO:0010311: lateral root formation	3.68E-02
141	GO:0016310: phosphorylation	3.78E-02
142	GO:0009407: toxin catabolic process	3.81E-02
143	GO:0006865: amino acid transport	4.08E-02
144	GO:0009867: jasmonic acid mediated signaling pathway	4.21E-02
145	GO:0030001: metal ion transport	4.62E-02
146	GO:0055085: transmembrane transport	4.66E-02
147	GO:0006810: transport	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0005522: profilin binding	0.00E+00
2	GO:0010293: abscisic aldehyde oxidase activity	0.00E+00
3	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
4	GO:0061798: GTP 3',8'-cyclase activity	0.00E+00
5	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
6	GO:0090416: nicotinate transporter activity	0.00E+00
7	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
8	GO:0016301: kinase activity	8.22E-05
9	GO:0016621: cinnamoyl-CoA reductase activity	1.59E-04
10	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	2.29E-04
11	GO:0090440: abscisic acid transporter activity	2.29E-04
12	GO:0047150: betaine-homocysteine S-methyltransferase activity	2.29E-04
13	GO:0042736: NADH kinase activity	2.29E-04
14	GO:0052894: norspermine:oxygen oxidoreductase activity	2.29E-04
15	GO:0090422: thiamine pyrophosphate transporter activity	2.29E-04
16	GO:0005524: ATP binding	3.05E-04
17	GO:0043565: sequence-specific DNA binding	4.71E-04
18	GO:1990585: hydroxyproline O-arabinosyltransferase activity	5.10E-04
19	GO:0042937: tripeptide transporter activity	5.10E-04
20	GO:0004103: choline kinase activity	5.10E-04
21	GO:0008883: glutamyl-tRNA reductase activity	5.10E-04
22	GO:0050291: sphingosine N-acyltransferase activity	5.10E-04
23	GO:0004594: pantothenate kinase activity	5.10E-04
24	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	5.10E-04
25	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	5.10E-04
26	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	6.46E-04
27	GO:0003840: gamma-glutamyltransferase activity	8.29E-04
28	GO:0036374: glutathione hydrolase activity	8.29E-04
29	GO:0046423: allene-oxide cyclase activity	8.29E-04
30	GO:0004383: guanylate cyclase activity	8.29E-04
31	GO:0016165: linoleate 13S-lipoxygenase activity	8.29E-04
32	GO:0046592: polyamine oxidase activity	8.29E-04
33	GO:0004674: protein serine/threonine kinase activity	1.17E-03
34	GO:0019201: nucleotide kinase activity	1.18E-03
35	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.18E-03
36	GO:0001653: peptide receptor activity	1.18E-03
37	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.18E-03
38	GO:0004672: protein kinase activity	1.56E-03
39	GO:0004031: aldehyde oxidase activity	1.57E-03
40	GO:0050302: indole-3-acetaldehyde oxidase activity	1.57E-03
41	GO:0004659: prenyltransferase activity	1.57E-03
42	GO:0015368: calcium:cation antiporter activity	1.57E-03
43	GO:0042936: dipeptide transporter activity	1.57E-03
44	GO:0015369: calcium:proton antiporter activity	1.57E-03
45	GO:0043015: gamma-tubulin binding	1.57E-03
46	GO:0018685: alkane 1-monooxygenase activity	2.01E-03
47	GO:0047631: ADP-ribose diphosphatase activity	2.01E-03
48	GO:0004356: glutamate-ammonia ligase activity	2.01E-03
49	GO:0050662: coenzyme binding	2.06E-03
50	GO:0035673: oligopeptide transmembrane transporter activity	2.48E-03
51	GO:0000210: NAD+ diphosphatase activity	2.48E-03
52	GO:0008200: ion channel inhibitor activity	2.48E-03
53	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.97E-03
54	GO:0004017: adenylate kinase activity	2.97E-03
55	GO:0019900: kinase binding	2.97E-03
56	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.04E-03
57	GO:0008143: poly(A) binding	3.50E-03
58	GO:0008506: sucrose:proton symporter activity	3.50E-03
59	GO:0030246: carbohydrate binding	4.02E-03
60	GO:0052747: sinapyl alcohol dehydrogenase activity	4.06E-03
61	GO:0004842: ubiquitin-protein transferase activity	4.52E-03
62	GO:0003951: NAD+ kinase activity	4.65E-03
63	GO:0008142: oxysterol binding	4.65E-03
64	GO:0047617: acyl-CoA hydrolase activity	5.91E-03
65	GO:0004712: protein serine/threonine/tyrosine kinase activity	6.14E-03
66	GO:0004713: protein tyrosine kinase activity	6.58E-03
67	GO:0008515: sucrose transmembrane transporter activity	7.28E-03
68	GO:0051537: 2 iron, 2 sulfur cluster binding	7.84E-03
69	GO:0045551: cinnamyl-alcohol dehydrogenase activity	8.00E-03
70	GO:0015198: oligopeptide transporter activity	8.00E-03
71	GO:0050660: flavin adenine dinucleotide binding	9.46E-03
72	GO:0008131: primary amine oxidase activity	9.52E-03
73	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.52E-03
74	GO:0004867: serine-type endopeptidase inhibitor activity	1.03E-02
75	GO:0003714: transcription corepressor activity	1.20E-02
76	GO:0051087: chaperone binding	1.28E-02
77	GO:0004707: MAP kinase activity	1.37E-02
78	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.37E-02
79	GO:0022891: substrate-specific transmembrane transporter activity	1.56E-02
80	GO:0005516: calmodulin binding	1.74E-02
81	GO:0009055: electron carrier activity	1.85E-02
82	GO:0016853: isomerase activity	2.05E-02
83	GO:0015144: carbohydrate transmembrane transporter activity	2.10E-02
84	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.25E-02
85	GO:0005351: sugar:proton symporter activity	2.36E-02
86	GO:0051015: actin filament binding	2.48E-02
87	GO:0044212: transcription regulatory region DNA binding	2.70E-02
88	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.71E-02
89	GO:0005215: transporter activity	3.12E-02
90	GO:0030247: polysaccharide binding	3.31E-02
91	GO:0004721: phosphoprotein phosphatase activity	3.31E-02
92	GO:0102483: scopolin beta-glucosidase activity	3.31E-02
93	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.56E-02
94	GO:0015238: drug transmembrane transporter activity	3.68E-02
95	GO:0005096: GTPase activator activity	3.68E-02
96	GO:0008422: beta-glucosidase activity	4.48E-02
97	GO:0051539: 4 iron, 4 sulfur cluster binding	4.62E-02
98	GO:0050661: NADP binding	4.62E-02
99	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.88E-02
100	GO:0004364: glutathione transferase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0005911: cell-cell junction	2.29E-04
2	GO:0019008: molybdopterin synthase complex	2.29E-04
3	GO:0005886: plasma membrane	6.19E-04
4	GO:0090406: pollen tube	9.94E-04
5	GO:0016021: integral component of membrane	1.51E-03
6	GO:0009505: plant-type cell wall	3.73E-03
7	GO:0010494: cytoplasmic stress granule	5.27E-03
8	GO:0090404: pollen tube tip	7.28E-03
9	GO:0071013: catalytic step 2 spliceosome	7.28E-03
10	GO:0005758: mitochondrial intermembrane space	1.20E-02
11	GO:0005737: cytoplasm	1.30E-02
12	GO:0009506: plasmodesma	1.68E-02
13	GO:0030136: clathrin-coated vesicle	1.75E-02
14	GO:0005770: late endosome	1.95E-02
15	GO:0046658: anchored component of plasma membrane	3.20E-02
16	GO:0009707: chloroplast outer membrane	3.56E-02
17	GO:0005829: cytosol	4.22E-02
18	GO:0031902: late endosome membrane	4.76E-02