GO Enrichment Analysis of Co-expressed Genes with
AT1G53500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000636: positive regulation of primary miRNA processing | 0.00E+00 |
| 2 | GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome | 0.00E+00 |
| 3 | GO:2001143: N-methylnicotinate transport | 0.00E+00 |
| 4 | GO:2000630: positive regulation of miRNA metabolic process | 0.00E+00 |
| 5 | GO:0006862: nucleotide transport | 0.00E+00 |
| 6 | GO:2001142: nicotinate transport | 0.00E+00 |
| 7 | GO:0042353: fucose biosynthetic process | 0.00E+00 |
| 8 | GO:0009966: regulation of signal transduction | 2.30E-05 |
| 9 | GO:0009969: xyloglucan biosynthetic process | 3.12E-05 |
| 10 | GO:0009863: salicylic acid mediated signaling pathway | 4.04E-05 |
| 11 | GO:0052542: defense response by callose deposition | 5.89E-05 |
| 12 | GO:0030100: regulation of endocytosis | 1.55E-04 |
| 13 | GO:0009399: nitrogen fixation | 1.55E-04 |
| 14 | GO:1902347: response to strigolactone | 2.12E-04 |
| 15 | GO:0009823: cytokinin catabolic process | 2.73E-04 |
| 16 | GO:0010337: regulation of salicylic acid metabolic process | 3.37E-04 |
| 17 | GO:0010256: endomembrane system organization | 3.37E-04 |
| 18 | GO:0006897: endocytosis | 3.42E-04 |
| 19 | GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway | 4.74E-04 |
| 20 | GO:0006955: immune response | 4.74E-04 |
| 21 | GO:1900150: regulation of defense response to fungus | 5.46E-04 |
| 22 | GO:0009690: cytokinin metabolic process | 5.46E-04 |
| 23 | GO:0098656: anion transmembrane transport | 6.98E-04 |
| 24 | GO:0048268: clathrin coat assembly | 7.77E-04 |
| 25 | GO:0048829: root cap development | 8.59E-04 |
| 26 | GO:0019538: protein metabolic process | 8.59E-04 |
| 27 | GO:0006468: protein phosphorylation | 1.26E-03 |
| 28 | GO:0071732: cellular response to nitric oxide | 1.30E-03 |
| 29 | GO:0080188: RNA-directed DNA methylation | 1.30E-03 |
| 30 | GO:0007166: cell surface receptor signaling pathway | 1.32E-03 |
| 31 | GO:0016998: cell wall macromolecule catabolic process | 1.70E-03 |
| 32 | GO:0030245: cellulose catabolic process | 1.80E-03 |
| 33 | GO:0071369: cellular response to ethylene stimulus | 1.91E-03 |
| 34 | GO:0010089: xylem development | 2.02E-03 |
| 35 | GO:0048544: recognition of pollen | 2.48E-03 |
| 36 | GO:0009409: response to cold | 2.55E-03 |
| 37 | GO:1901657: glycosyl compound metabolic process | 2.96E-03 |
| 38 | GO:0071281: cellular response to iron ion | 2.96E-03 |
| 39 | GO:0010411: xyloglucan metabolic process | 3.89E-03 |
| 40 | GO:0008219: cell death | 4.17E-03 |
| 41 | GO:0010311: lateral root formation | 4.32E-03 |
| 42 | GO:0048767: root hair elongation | 4.32E-03 |
| 43 | GO:0006839: mitochondrial transport | 5.36E-03 |
| 44 | GO:0035556: intracellular signal transduction | 5.99E-03 |
| 45 | GO:0008643: carbohydrate transport | 6.16E-03 |
| 46 | GO:0055085: transmembrane transport | 7.19E-03 |
| 47 | GO:0009626: plant-type hypersensitive response | 8.42E-03 |
| 48 | GO:0009620: response to fungus | 8.61E-03 |
| 49 | GO:0009624: response to nematode | 9.17E-03 |
| 50 | GO:0018105: peptidyl-serine phosphorylation | 9.36E-03 |
| 51 | GO:0009742: brassinosteroid mediated signaling pathway | 9.56E-03 |
| 52 | GO:0000398: mRNA splicing, via spliceosome | 1.01E-02 |
| 53 | GO:0009845: seed germination | 1.14E-02 |
| 54 | GO:0007623: circadian rhythm | 1.35E-02 |
| 55 | GO:0009617: response to bacterium | 1.53E-02 |
| 56 | GO:0009826: unidimensional cell growth | 1.79E-02 |
| 57 | GO:0048366: leaf development | 2.06E-02 |
| 58 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.19E-02 |
| 59 | GO:0046777: protein autophosphorylation | 2.25E-02 |
| 60 | GO:0009737: response to abscisic acid | 2.46E-02 |
| 61 | GO:0016310: phosphorylation | 2.83E-02 |
| 62 | GO:0006397: mRNA processing | 2.91E-02 |
| 63 | GO:0048364: root development | 2.91E-02 |
| 64 | GO:0009738: abscisic acid-activated signaling pathway | 4.15E-02 |
| 65 | GO:0009611: response to wounding | 4.32E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090417: N-methylnicotinate transporter activity | 0.00E+00 |
| 2 | GO:0032442: phenylcoumaran benzylic ether reductase activity | 0.00E+00 |
| 3 | GO:0090416: nicotinate transporter activity | 0.00E+00 |
| 4 | GO:0010857: calcium-dependent protein kinase activity | 0.00E+00 |
| 5 | GO:0015215: nucleotide transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0008514: organic anion transmembrane transporter activity | 6.90E-05 |
| 7 | GO:0033843: xyloglucan 6-xylosyltransferase activity | 1.55E-04 |
| 8 | GO:0043015: gamma-tubulin binding | 2.12E-04 |
| 9 | GO:0004356: glutamate-ammonia ligase activity | 2.73E-04 |
| 10 | GO:0019139: cytokinin dehydrogenase activity | 2.73E-04 |
| 11 | GO:0051020: GTPase binding | 4.04E-04 |
| 12 | GO:0008143: poly(A) binding | 4.74E-04 |
| 13 | GO:0004143: diacylglycerol kinase activity | 4.74E-04 |
| 14 | GO:0003951: NAD+ kinase activity | 6.21E-04 |
| 15 | GO:0005545: 1-phosphatidylinositol binding | 8.59E-04 |
| 16 | GO:0015144: carbohydrate transmembrane transporter activity | 1.02E-03 |
| 17 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.09E-03 |
| 18 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.12E-03 |
| 19 | GO:0019888: protein phosphatase regulator activity | 1.12E-03 |
| 20 | GO:0005351: sugar:proton symporter activity | 1.14E-03 |
| 21 | GO:0008131: primary amine oxidase activity | 1.20E-03 |
| 22 | GO:0051087: chaperone binding | 1.59E-03 |
| 23 | GO:0022891: substrate-specific transmembrane transporter activity | 1.91E-03 |
| 24 | GO:0030276: clathrin binding | 2.36E-03 |
| 25 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 3.75E-03 |
| 26 | GO:0004683: calmodulin-dependent protein kinase activity | 3.89E-03 |
| 27 | GO:0102483: scopolin beta-glucosidase activity | 3.89E-03 |
| 28 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.60E-03 |
| 29 | GO:0008422: beta-glucosidase activity | 5.21E-03 |
| 30 | GO:0043621: protein self-association | 6.16E-03 |
| 31 | GO:0005516: calmodulin binding | 8.53E-03 |
| 32 | GO:0022857: transmembrane transporter activity | 8.79E-03 |
| 33 | GO:0003779: actin binding | 8.98E-03 |
| 34 | GO:0016758: transferase activity, transferring hexosyl groups | 1.05E-02 |
| 35 | GO:0004674: protein serine/threonine kinase activity | 1.31E-02 |
| 36 | GO:0008017: microtubule binding | 1.39E-02 |
| 37 | GO:0004672: protein kinase activity | 1.69E-02 |
| 38 | GO:0003729: mRNA binding | 1.71E-02 |
| 39 | GO:0016301: kinase activity | 1.79E-02 |
| 40 | GO:0050660: flavin adenine dinucleotide binding | 2.04E-02 |
| 41 | GO:0005524: ATP binding | 2.88E-02 |
| 42 | GO:0016757: transferase activity, transferring glycosyl groups | 3.92E-02 |
| 43 | GO:0016740: transferase activity | 4.90E-02 |
| 44 | GO:0005515: protein binding | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005768: endosome | 1.70E-05 |
| 2 | GO:0005886: plasma membrane | 5.37E-05 |
| 3 | GO:0030136: clathrin-coated vesicle | 7.58E-05 |
| 4 | GO:0005794: Golgi apparatus | 3.61E-04 |
| 5 | GO:0030173: integral component of Golgi membrane | 4.04E-04 |
| 6 | GO:0010494: cytoplasmic stress granule | 6.98E-04 |
| 7 | GO:0015030: Cajal body | 7.77E-04 |
| 8 | GO:0005802: trans-Golgi network | 1.30E-03 |
| 9 | GO:0005905: clathrin-coated pit | 1.70E-03 |
| 10 | GO:0032580: Golgi cisterna membrane | 3.09E-03 |
| 11 | GO:0005778: peroxisomal membrane | 3.22E-03 |
| 12 | GO:0016021: integral component of membrane | 3.77E-03 |
| 13 | GO:0031902: late endosome membrane | 5.52E-03 |
| 14 | GO:0005681: spliceosomal complex | 8.06E-03 |
| 15 | GO:0010008: endosome membrane | 8.24E-03 |
| 16 | GO:0012505: endomembrane system | 8.98E-03 |
| 17 | GO:0009706: chloroplast inner membrane | 9.17E-03 |
| 18 | GO:0009536: plastid | 1.41E-02 |
| 19 | GO:0005615: extracellular space | 1.46E-02 |
| 20 | GO:0005829: cytosol | 1.49E-02 |
| 21 | GO:0000139: Golgi membrane | 1.56E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 1.64E-02 |
| 23 | GO:0005743: mitochondrial inner membrane | 2.68E-02 |
| 24 | GO:0016020: membrane | 3.55E-02 |
| 25 | GO:0009506: plasmodesma | 4.50E-02 |
| 26 | GO:0005777: peroxisome | 4.69E-02 |