co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G53470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010046: response to mycotoxin	0.00E+00
2	GO:0006862: nucleotide transport	0.00E+00
3	GO:0009737: response to abscisic acid	1.99E-05
4	GO:0009609: response to symbiotic bacterium	5.03E-05
5	GO:0010372: positive regulation of gibberellin biosynthetic process	1.23E-04
6	GO:2000030: regulation of response to red or far red light	1.23E-04
7	GO:0009686: gibberellin biosynthetic process	1.87E-04
8	GO:0080168: abscisic acid transport	2.11E-04
9	GO:0006081: cellular aldehyde metabolic process	2.11E-04
10	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	2.11E-04
11	GO:1902448: positive regulation of shade avoidance	2.11E-04
12	GO:0009749: response to glucose	3.01E-04
13	GO:0033014: tetrapyrrole biosynthetic process	3.09E-04
14	GO:0009399: nitrogen fixation	3.09E-04
15	GO:0009694: jasmonic acid metabolic process	4.15E-04
16	GO:0009611: response to wounding	4.15E-04
17	GO:0006536: glutamate metabolic process	4.15E-04
18	GO:0045487: gibberellin catabolic process	5.26E-04
19	GO:0009247: glycolipid biosynthetic process	5.26E-04
20	GO:0006970: response to osmotic stress	6.42E-04
21	GO:0006796: phosphate-containing compound metabolic process	6.44E-04
22	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	7.68E-04
23	GO:0010555: response to mannitol	7.68E-04
24	GO:1902074: response to salt	8.97E-04
25	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	8.97E-04
26	GO:0006401: RNA catabolic process	8.97E-04
27	GO:0006955: immune response	8.97E-04
28	GO:0071669: plant-type cell wall organization or biogenesis	8.97E-04
29	GO:0006402: mRNA catabolic process	1.03E-03
30	GO:0019375: galactolipid biosynthetic process	1.03E-03
31	GO:2000070: regulation of response to water deprivation	1.03E-03
32	GO:0010208: pollen wall assembly	1.17E-03
33	GO:0048193: Golgi vesicle transport	1.17E-03
34	GO:0006364: rRNA processing	1.28E-03
35	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	1.32E-03
36	GO:0006783: heme biosynthetic process	1.32E-03
37	GO:0010345: suberin biosynthetic process	1.32E-03
38	GO:2000280: regulation of root development	1.47E-03
39	GO:0006779: porphyrin-containing compound biosynthetic process	1.47E-03
40	GO:0048829: root cap development	1.63E-03
41	GO:0006782: protoporphyrinogen IX biosynthetic process	1.63E-03
42	GO:0010015: root morphogenesis	1.79E-03
43	GO:0071365: cellular response to auxin stimulus	1.96E-03
44	GO:0000398: mRNA splicing, via spliceosome	2.07E-03
45	GO:0034605: cellular response to heat	2.32E-03
46	GO:0010167: response to nitrate	2.50E-03
47	GO:0009790: embryo development	2.61E-03
48	GO:2000377: regulation of reactive oxygen species metabolic process	2.88E-03
49	GO:0007623: circadian rhythm	3.07E-03
50	GO:0009269: response to desiccation	3.29E-03
51	GO:0030433: ubiquitin-dependent ERAD pathway	3.50E-03
52	GO:0031348: negative regulation of defense response	3.50E-03
53	GO:0009306: protein secretion	3.93E-03
54	GO:0000271: polysaccharide biosynthetic process	4.37E-03
55	GO:0010501: RNA secondary structure unwinding	4.37E-03
56	GO:0048544: recognition of pollen	4.83E-03
57	GO:0006814: sodium ion transport	4.83E-03
58	GO:0010193: response to ozone	5.32E-03
59	GO:0000302: response to reactive oxygen species	5.32E-03
60	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	5.32E-03
61	GO:0031047: gene silencing by RNA	5.56E-03
62	GO:0009639: response to red or far red light	6.07E-03
63	GO:0010286: heat acclimation	6.33E-03
64	GO:0010027: thylakoid membrane organization	6.85E-03
65	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	7.12E-03
66	GO:0010029: regulation of seed germination	7.12E-03
67	GO:0009627: systemic acquired resistance	7.40E-03
68	GO:0015995: chlorophyll biosynthetic process	7.68E-03
69	GO:0030244: cellulose biosynthetic process	8.24E-03
70	GO:0010311: lateral root formation	8.53E-03
71	GO:0009832: plant-type cell wall biogenesis	8.53E-03
72	GO:0010119: regulation of stomatal movement	9.12E-03
73	GO:0009753: response to jasmonic acid	9.26E-03
74	GO:0045087: innate immune response	9.73E-03
75	GO:0006839: mitochondrial transport	1.07E-02
76	GO:0046686: response to cadmium ion	1.09E-02
77	GO:0009873: ethylene-activated signaling pathway	1.12E-02
78	GO:0009640: photomorphogenesis	1.16E-02
79	GO:0051707: response to other organism	1.16E-02
80	GO:0006855: drug transmembrane transport	1.30E-02
81	GO:0006812: cation transport	1.37E-02
82	GO:0009846: pollen germination	1.37E-02
83	GO:0042538: hyperosmotic salinity response	1.37E-02
84	GO:0009585: red, far-red light phototransduction	1.44E-02
85	GO:0006813: potassium ion transport	1.44E-02
86	GO:0010224: response to UV-B	1.47E-02
87	GO:0009738: abscisic acid-activated signaling pathway	1.49E-02
88	GO:0009624: response to nematode	1.84E-02
89	GO:0006396: RNA processing	1.88E-02
90	GO:0009742: brassinosteroid mediated signaling pathway	1.92E-02
91	GO:0055085: transmembrane transport	1.95E-02
92	GO:0009058: biosynthetic process	2.24E-02
93	GO:0009845: seed germination	2.29E-02
94	GO:0006633: fatty acid biosynthetic process	2.54E-02
95	GO:0006468: protein phosphorylation	2.55E-02
96	GO:0010150: leaf senescence	2.72E-02
97	GO:0006470: protein dephosphorylation	2.99E-02
98	GO:0009414: response to water deprivation	3.04E-02
99	GO:0009617: response to bacterium	3.08E-02
100	GO:0071555: cell wall organization	3.12E-02
101	GO:0007049: cell cycle	4.01E-02
102	GO:0080167: response to karrikin	4.32E-02
103	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.43E-02
104	GO:0010200: response to chitin	4.43E-02
105	GO:0046777: protein autophosphorylation	4.54E-02
106	GO:0006810: transport	4.56E-02
107	GO:0005975: carbohydrate metabolic process	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
2	GO:0033721: aldehyde dehydrogenase (NADP+) activity	0.00E+00
3	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
4	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
5	GO:0070566: adenylyltransferase activity	0.00E+00
6	GO:0090440: abscisic acid transporter activity	5.03E-05
7	GO:0008883: glutamyl-tRNA reductase activity	1.23E-04
8	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	1.23E-04
9	GO:0004383: guanylate cyclase activity	2.11E-04
10	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	2.11E-04
11	GO:0035250: UDP-galactosyltransferase activity	3.09E-04
12	GO:0004351: glutamate decarboxylase activity	3.09E-04
13	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	3.09E-04
14	GO:0001653: peptide receptor activity	3.09E-04
15	GO:0005432: calcium:sodium antiporter activity	3.09E-04
16	GO:0015297: antiporter activity	3.15E-04
17	GO:0043015: gamma-tubulin binding	4.15E-04
18	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	5.26E-04
19	GO:0004356: glutamate-ammonia ligase activity	5.26E-04
20	GO:0009922: fatty acid elongase activity	5.26E-04
21	GO:0004004: ATP-dependent RNA helicase activity	5.46E-04
22	GO:0004029: aldehyde dehydrogenase (NAD) activity	6.44E-04
23	GO:0051753: mannan synthase activity	7.68E-04
24	GO:0019899: enzyme binding	8.97E-04
25	GO:0004427: inorganic diphosphatase activity	8.97E-04
26	GO:0015491: cation:cation antiporter activity	1.03E-03
27	GO:0004564: beta-fructofuranosidase activity	1.03E-03
28	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.47E-03
29	GO:0004575: sucrose alpha-glucosidase activity	1.47E-03
30	GO:0000175: 3'-5'-exoribonuclease activity	2.14E-03
31	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	2.69E-03
32	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	2.69E-03
33	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	2.69E-03
34	GO:0004540: ribonuclease activity	3.29E-03
35	GO:0016760: cellulose synthase (UDP-forming) activity	3.71E-03
36	GO:0008536: Ran GTPase binding	4.60E-03
37	GO:0004518: nuclease activity	5.56E-03
38	GO:0016759: cellulose synthase activity	6.07E-03
39	GO:0005215: transporter activity	7.02E-03
40	GO:0004722: protein serine/threonine phosphatase activity	7.68E-03
41	GO:0015238: drug transmembrane transporter activity	8.53E-03
42	GO:0050661: NADP binding	1.07E-02
43	GO:0043621: protein self-association	1.23E-02
44	GO:0004674: protein serine/threonine kinase activity	1.30E-02
45	GO:0016887: ATPase activity	1.34E-02
46	GO:0000166: nucleotide binding	1.54E-02
47	GO:0031625: ubiquitin protein ligase binding	1.54E-02
48	GO:0005524: ATP binding	1.79E-02
49	GO:0004386: helicase activity	1.96E-02
50	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.03E-02
51	GO:0030246: carbohydrate binding	2.07E-02
52	GO:0005516: calmodulin binding	2.32E-02
53	GO:0030170: pyridoxal phosphate binding	2.33E-02
54	GO:0004252: serine-type endopeptidase activity	2.33E-02
55	GO:0008565: protein transporter activity	2.46E-02
56	GO:0008017: microtubule binding	2.81E-02
57	GO:0016757: transferase activity, transferring glycosyl groups	2.90E-02
58	GO:0008194: UDP-glycosyltransferase activity	2.95E-02
59	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.23E-02
60	GO:0000287: magnesium ion binding	3.66E-02
61	GO:0003676: nucleic acid binding	3.68E-02
62	GO:0004842: ubiquitin-protein transferase activity	4.30E-02
63	GO:0004672: protein kinase activity	4.56E-02
64	GO:0003729: mRNA binding	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0016442: RISC complex	5.03E-05
2	GO:0000932: P-body	4.65E-04
3	GO:0000178: exosome (RNase complex)	5.26E-04
4	GO:0010494: cytoplasmic stress granule	1.32E-03
5	GO:0009536: plastid	1.58E-03
6	GO:0071013: catalytic step 2 spliceosome	1.79E-03
7	GO:0048471: perinuclear region of cytoplasm	1.79E-03
8	GO:0009706: chloroplast inner membrane	1.80E-03
9	GO:0030136: clathrin-coated vesicle	4.15E-03
10	GO:0031225: anchored component of membrane	4.44E-03
11	GO:0005770: late endosome	4.60E-03
12	GO:0005643: nuclear pore	8.24E-03
13	GO:0031902: late endosome membrane	1.10E-02
14	GO:0005635: nuclear envelope	1.51E-02
15	GO:0009506: plasmodesma	1.91E-02
16	GO:0005774: vacuolar membrane	2.97E-02
17	GO:0046658: anchored component of plasma membrane	3.32E-02
18	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.96E-02
19	GO:0009941: chloroplast envelope	4.33E-02
20	GO:0005886: plasma membrane	4.37E-02
21	GO:0005737: cytoplasm	4.72E-02