GO Enrichment Analysis of Co-expressed Genes with
AT1G53310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043201: response to leucine | 0.00E+00 |
| 2 | GO:0080052: response to histidine | 0.00E+00 |
| 3 | GO:0080053: response to phenylalanine | 0.00E+00 |
| 4 | GO:0033587: shikimate biosynthetic process | 0.00E+00 |
| 5 | GO:0048867: stem cell fate determination | 0.00E+00 |
| 6 | GO:0043462: regulation of ATPase activity | 0.00E+00 |
| 7 | GO:0009073: aromatic amino acid family biosynthetic process | 1.45E-07 |
| 8 | GO:0009809: lignin biosynthetic process | 7.03E-07 |
| 9 | GO:0009423: chorismate biosynthetic process | 4.23E-06 |
| 10 | GO:0046686: response to cadmium ion | 1.02E-05 |
| 11 | GO:0006098: pentose-phosphate shunt | 1.30E-05 |
| 12 | GO:0080173: male-female gamete recognition during double fertilization | 2.88E-05 |
| 13 | GO:0006007: glucose catabolic process | 2.88E-05 |
| 14 | GO:1902066: regulation of cell wall pectin metabolic process | 7.28E-05 |
| 15 | GO:0019521: D-gluconate metabolic process | 7.28E-05 |
| 16 | GO:0019632: shikimate metabolic process | 7.28E-05 |
| 17 | GO:0042939: tripeptide transport | 7.28E-05 |
| 18 | GO:0030187: melatonin biosynthetic process | 7.28E-05 |
| 19 | GO:0080009: mRNA methylation | 7.28E-05 |
| 20 | GO:0009805: coumarin biosynthetic process | 7.28E-05 |
| 21 | GO:0006413: translational initiation | 1.13E-04 |
| 22 | GO:1901672: positive regulation of systemic acquired resistance | 1.27E-04 |
| 23 | GO:0048586: regulation of long-day photoperiodism, flowering | 1.27E-04 |
| 24 | GO:0032922: circadian regulation of gene expression | 1.27E-04 |
| 25 | GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process | 1.27E-04 |
| 26 | GO:0010104: regulation of ethylene-activated signaling pathway | 1.89E-04 |
| 27 | GO:0033356: UDP-L-arabinose metabolic process | 2.57E-04 |
| 28 | GO:0042938: dipeptide transport | 2.57E-04 |
| 29 | GO:0009832: plant-type cell wall biogenesis | 3.15E-04 |
| 30 | GO:0071669: plant-type cell wall organization or biogenesis | 5.68E-04 |
| 31 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 6.55E-04 |
| 32 | GO:0006875: cellular metal ion homeostasis | 6.55E-04 |
| 33 | GO:0009932: cell tip growth | 7.44E-04 |
| 34 | GO:0006096: glycolytic process | 7.62E-04 |
| 35 | GO:0007338: single fertilization | 8.35E-04 |
| 36 | GO:0006754: ATP biosynthetic process | 8.35E-04 |
| 37 | GO:0008202: steroid metabolic process | 9.29E-04 |
| 38 | GO:0051555: flavonol biosynthetic process | 1.03E-03 |
| 39 | GO:0009555: pollen development | 1.03E-03 |
| 40 | GO:0006032: chitin catabolic process | 1.03E-03 |
| 41 | GO:0009611: response to wounding | 1.06E-03 |
| 42 | GO:0015706: nitrate transport | 1.23E-03 |
| 43 | GO:0010152: pollen maturation | 1.23E-03 |
| 44 | GO:0030036: actin cytoskeleton organization | 1.34E-03 |
| 45 | GO:0010167: response to nitrate | 1.56E-03 |
| 46 | GO:0010053: root epidermal cell differentiation | 1.56E-03 |
| 47 | GO:0080147: root hair cell development | 1.79E-03 |
| 48 | GO:0006874: cellular calcium ion homeostasis | 1.92E-03 |
| 49 | GO:0010073: meristem maintenance | 1.92E-03 |
| 50 | GO:0016998: cell wall macromolecule catabolic process | 2.04E-03 |
| 51 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.17E-03 |
| 52 | GO:0009561: megagametogenesis | 2.43E-03 |
| 53 | GO:0034220: ion transmembrane transport | 2.70E-03 |
| 54 | GO:0010501: RNA secondary structure unwinding | 2.70E-03 |
| 55 | GO:0010118: stomatal movement | 2.70E-03 |
| 56 | GO:0009567: double fertilization forming a zygote and endosperm | 3.73E-03 |
| 57 | GO:0032259: methylation | 4.07E-03 |
| 58 | GO:0009911: positive regulation of flower development | 4.21E-03 |
| 59 | GO:0005975: carbohydrate metabolic process | 4.21E-03 |
| 60 | GO:0009408: response to heat | 4.25E-03 |
| 61 | GO:0042128: nitrate assimilation | 4.54E-03 |
| 62 | GO:0006888: ER to Golgi vesicle-mediated transport | 4.71E-03 |
| 63 | GO:0048573: photoperiodism, flowering | 4.71E-03 |
| 64 | GO:0030244: cellulose biosynthetic process | 5.05E-03 |
| 65 | GO:0009631: cold acclimation | 5.58E-03 |
| 66 | GO:0010043: response to zinc ion | 5.58E-03 |
| 67 | GO:0042542: response to hydrogen peroxide | 6.89E-03 |
| 68 | GO:0009793: embryo development ending in seed dormancy | 7.19E-03 |
| 69 | GO:0042538: hyperosmotic salinity response | 8.29E-03 |
| 70 | GO:0009846: pollen germination | 8.29E-03 |
| 71 | GO:0006364: rRNA processing | 8.71E-03 |
| 72 | GO:0006857: oligopeptide transport | 9.14E-03 |
| 73 | GO:0006417: regulation of translation | 9.36E-03 |
| 74 | GO:0006457: protein folding | 9.73E-03 |
| 75 | GO:0009553: embryo sac development | 1.09E-02 |
| 76 | GO:0009651: response to salt stress | 1.15E-02 |
| 77 | GO:0009742: brassinosteroid mediated signaling pathway | 1.16E-02 |
| 78 | GO:0016036: cellular response to phosphate starvation | 1.56E-02 |
| 79 | GO:0010468: regulation of gene expression | 1.86E-02 |
| 80 | GO:0006970: response to osmotic stress | 2.36E-02 |
| 81 | GO:0080167: response to karrikin | 2.61E-02 |
| 82 | GO:0006886: intracellular protein transport | 3.04E-02 |
| 83 | GO:0006869: lipid transport | 3.17E-02 |
| 84 | GO:0009751: response to salicylic acid | 3.41E-02 |
| 85 | GO:0006629: lipid metabolic process | 3.45E-02 |
| 86 | GO:0048364: root development | 3.55E-02 |
| 87 | GO:0009753: response to jasmonic acid | 3.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004622: lysophospholipase activity | 0.00E+00 |
| 2 | GO:0004764: shikimate 3-dehydrogenase (NADP+) activity | 0.00E+00 |
| 3 | GO:0047763: caffeate O-methyltransferase activity | 0.00E+00 |
| 4 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 5 | GO:0030755: quercetin 3-O-methyltransferase activity | 0.00E+00 |
| 6 | GO:0003846: 2-acylglycerol O-acyltransferase activity | 0.00E+00 |
| 7 | GO:0030744: luteolin O-methyltransferase activity | 0.00E+00 |
| 8 | GO:0003855: 3-dehydroquinate dehydratase activity | 0.00E+00 |
| 9 | GO:0033799: myricetin 3'-O-methyltransferase activity | 0.00E+00 |
| 10 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 2.88E-05 |
| 11 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 2.88E-05 |
| 12 | GO:0017096: acetylserotonin O-methyltransferase activity | 2.88E-05 |
| 13 | GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity | 2.88E-05 |
| 14 | GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity | 7.28E-05 |
| 15 | GO:0032934: sterol binding | 7.28E-05 |
| 16 | GO:0052691: UDP-arabinopyranose mutase activity | 7.28E-05 |
| 17 | GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity | 7.28E-05 |
| 18 | GO:0042937: tripeptide transporter activity | 7.28E-05 |
| 19 | GO:0003729: mRNA binding | 1.01E-04 |
| 20 | GO:0019829: cation-transporting ATPase activity | 1.27E-04 |
| 21 | GO:0042409: caffeoyl-CoA O-methyltransferase activity | 1.27E-04 |
| 22 | GO:0003743: translation initiation factor activity | 1.57E-04 |
| 23 | GO:0016866: intramolecular transferase activity | 2.57E-04 |
| 24 | GO:0042936: dipeptide transporter activity | 2.57E-04 |
| 25 | GO:0031369: translation initiation factor binding | 4.06E-04 |
| 26 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 4.86E-04 |
| 27 | GO:0004656: procollagen-proline 4-dioxygenase activity | 4.86E-04 |
| 28 | GO:0004564: beta-fructofuranosidase activity | 6.55E-04 |
| 29 | GO:0008142: oxysterol binding | 7.44E-04 |
| 30 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 8.35E-04 |
| 31 | GO:0004743: pyruvate kinase activity | 9.29E-04 |
| 32 | GO:0004575: sucrose alpha-glucosidase activity | 9.29E-04 |
| 33 | GO:0030955: potassium ion binding | 9.29E-04 |
| 34 | GO:0015112: nitrate transmembrane transporter activity | 9.29E-04 |
| 35 | GO:0008026: ATP-dependent helicase activity | 9.59E-04 |
| 36 | GO:0004568: chitinase activity | 1.03E-03 |
| 37 | GO:0008171: O-methyltransferase activity | 1.03E-03 |
| 38 | GO:0005388: calcium-transporting ATPase activity | 1.34E-03 |
| 39 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.34E-03 |
| 40 | GO:0031072: heat shock protein binding | 1.34E-03 |
| 41 | GO:0016760: cellulose synthase (UDP-forming) activity | 2.30E-03 |
| 42 | GO:0010181: FMN binding | 2.99E-03 |
| 43 | GO:0015250: water channel activity | 4.21E-03 |
| 44 | GO:0004721: phosphoprotein phosphatase activity | 4.71E-03 |
| 45 | GO:0004004: ATP-dependent RNA helicase activity | 4.71E-03 |
| 46 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 4.88E-03 |
| 47 | GO:0030145: manganese ion binding | 5.58E-03 |
| 48 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 5.94E-03 |
| 49 | GO:0050661: NADP binding | 6.50E-03 |
| 50 | GO:0051082: unfolded protein binding | 1.12E-02 |
| 51 | GO:0004386: helicase activity | 1.19E-02 |
| 52 | GO:0005524: ATP binding | 1.97E-02 |
| 53 | GO:0000287: magnesium ion binding | 2.21E-02 |
| 54 | GO:0046872: metal ion binding | 3.08E-02 |
| 55 | GO:0004722: protein serine/threonine phosphatase activity | 3.17E-02 |
| 56 | GO:0016787: hydrolase activity | 3.27E-02 |
| 57 | GO:0003723: RNA binding | 3.34E-02 |
| 58 | GO:0005515: protein binding | 3.57E-02 |
| 59 | GO:0016887: ATPase activity | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019822: P4 peroxisome | 0.00E+00 |
| 2 | GO:0036396: MIS complex | 0.00E+00 |
| 3 | GO:0005829: cytosol | 3.71E-07 |
| 4 | GO:0000138: Golgi trans cisterna | 2.88E-05 |
| 5 | GO:0030130: clathrin coat of trans-Golgi network vesicle | 1.27E-04 |
| 6 | GO:0030132: clathrin coat of coated pit | 1.27E-04 |
| 7 | GO:0005886: plasma membrane | 2.48E-04 |
| 8 | GO:0005730: nucleolus | 8.65E-04 |
| 9 | GO:0005740: mitochondrial envelope | 1.03E-03 |
| 10 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.13E-03 |
| 11 | GO:0031307: integral component of mitochondrial outer membrane | 1.23E-03 |
| 12 | GO:0005795: Golgi stack | 1.56E-03 |
| 13 | GO:0005618: cell wall | 3.11E-03 |
| 14 | GO:0009536: plastid | 3.22E-03 |
| 15 | GO:0005737: cytoplasm | 4.15E-03 |
| 16 | GO:0009506: plasmodesma | 5.37E-03 |
| 17 | GO:0005887: integral component of plasma membrane | 5.75E-03 |
| 18 | GO:0009570: chloroplast stroma | 6.68E-03 |
| 19 | GO:0005783: endoplasmic reticulum | 7.35E-03 |
| 20 | GO:0005777: peroxisome | 8.62E-03 |
| 21 | GO:0016607: nuclear speck | 1.00E-02 |
| 22 | GO:0005774: vacuolar membrane | 1.20E-02 |
| 23 | GO:0005789: endoplasmic reticulum membrane | 2.33E-02 |
| 24 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.39E-02 |
| 25 | GO:0005794: Golgi apparatus | 3.02E-02 |