GO Enrichment Analysis of Co-expressed Genes with
AT1G52870
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 2 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 3 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 4 | GO:0019447: D-cysteine catabolic process | 0.00E+00 |
| 5 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 6 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 7 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 8 | GO:0098586: cellular response to virus | 0.00E+00 |
| 9 | GO:0042853: L-alanine catabolic process | 3.18E-07 |
| 10 | GO:0018298: protein-chromophore linkage | 1.94E-06 |
| 11 | GO:0015979: photosynthesis | 2.35E-05 |
| 12 | GO:0009642: response to light intensity | 3.68E-05 |
| 13 | GO:0010206: photosystem II repair | 5.84E-05 |
| 14 | GO:0033388: putrescine biosynthetic process from arginine | 7.58E-05 |
| 15 | GO:0071277: cellular response to calcium ion | 7.58E-05 |
| 16 | GO:1904966: positive regulation of vitamin E biosynthetic process | 7.58E-05 |
| 17 | GO:1904964: positive regulation of phytol biosynthetic process | 7.58E-05 |
| 18 | GO:0010028: xanthophyll cycle | 7.58E-05 |
| 19 | GO:0009853: photorespiration | 9.35E-05 |
| 20 | GO:0006006: glucose metabolic process | 1.36E-04 |
| 21 | GO:0009644: response to high light intensity | 1.51E-04 |
| 22 | GO:0019253: reductive pentose-phosphate cycle | 1.55E-04 |
| 23 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.81E-04 |
| 24 | GO:0042548: regulation of photosynthesis, light reaction | 1.81E-04 |
| 25 | GO:0006435: threonyl-tRNA aminoacylation | 1.81E-04 |
| 26 | GO:0048314: embryo sac morphogenesis | 1.81E-04 |
| 27 | GO:0030187: melatonin biosynthetic process | 1.81E-04 |
| 28 | GO:0000256: allantoin catabolic process | 1.81E-04 |
| 29 | GO:0009446: putrescine biosynthetic process | 1.81E-04 |
| 30 | GO:0046741: transport of virus in host, tissue to tissue | 1.81E-04 |
| 31 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.44E-04 |
| 32 | GO:0009405: pathogenesis | 3.05E-04 |
| 33 | GO:0002230: positive regulation of defense response to virus by host | 3.05E-04 |
| 34 | GO:1901672: positive regulation of systemic acquired resistance | 3.05E-04 |
| 35 | GO:0010136: ureide catabolic process | 3.05E-04 |
| 36 | GO:0006433: prolyl-tRNA aminoacylation | 3.05E-04 |
| 37 | GO:0006145: purine nucleobase catabolic process | 4.41E-04 |
| 38 | GO:0051016: barbed-end actin filament capping | 4.41E-04 |
| 39 | GO:0046739: transport of virus in multicellular host | 4.41E-04 |
| 40 | GO:0043572: plastid fission | 4.41E-04 |
| 41 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.41E-04 |
| 42 | GO:0006020: inositol metabolic process | 4.41E-04 |
| 43 | GO:0071484: cellular response to light intensity | 4.41E-04 |
| 44 | GO:0009793: embryo development ending in seed dormancy | 5.84E-04 |
| 45 | GO:0006021: inositol biosynthetic process | 5.87E-04 |
| 46 | GO:0010109: regulation of photosynthesis | 5.87E-04 |
| 47 | GO:0006545: glycine biosynthetic process | 5.87E-04 |
| 48 | GO:0031935: regulation of chromatin silencing | 5.87E-04 |
| 49 | GO:0009765: photosynthesis, light harvesting | 5.87E-04 |
| 50 | GO:0006413: translational initiation | 6.07E-04 |
| 51 | GO:0034052: positive regulation of plant-type hypersensitive response | 7.44E-04 |
| 52 | GO:0006656: phosphatidylcholine biosynthetic process | 7.44E-04 |
| 53 | GO:0010117: photoprotection | 7.44E-04 |
| 54 | GO:0006282: regulation of DNA repair | 7.44E-04 |
| 55 | GO:0055114: oxidation-reduction process | 8.57E-04 |
| 56 | GO:0046855: inositol phosphate dephosphorylation | 9.07E-04 |
| 57 | GO:0009643: photosynthetic acclimation | 9.07E-04 |
| 58 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 9.07E-04 |
| 59 | GO:0010189: vitamin E biosynthetic process | 1.08E-03 |
| 60 | GO:0071470: cellular response to osmotic stress | 1.08E-03 |
| 61 | GO:0009658: chloroplast organization | 1.14E-03 |
| 62 | GO:0009645: response to low light intensity stimulus | 1.26E-03 |
| 63 | GO:0048528: post-embryonic root development | 1.26E-03 |
| 64 | GO:0034599: cellular response to oxidative stress | 1.31E-03 |
| 65 | GO:0009704: de-etiolation | 1.46E-03 |
| 66 | GO:0048564: photosystem I assembly | 1.46E-03 |
| 67 | GO:0010114: response to red light | 1.60E-03 |
| 68 | GO:0009657: plastid organization | 1.66E-03 |
| 69 | GO:0009821: alkaloid biosynthetic process | 1.87E-03 |
| 70 | GO:0090333: regulation of stomatal closure | 1.87E-03 |
| 71 | GO:0098656: anion transmembrane transport | 1.87E-03 |
| 72 | GO:1900426: positive regulation of defense response to bacterium | 2.09E-03 |
| 73 | GO:0006096: glycolytic process | 2.53E-03 |
| 74 | GO:0009773: photosynthetic electron transport in photosystem I | 2.56E-03 |
| 75 | GO:0043085: positive regulation of catalytic activity | 2.56E-03 |
| 76 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.56E-03 |
| 77 | GO:0006790: sulfur compound metabolic process | 2.80E-03 |
| 78 | GO:0009553: embryo sac development | 2.95E-03 |
| 79 | GO:0006807: nitrogen compound metabolic process | 3.06E-03 |
| 80 | GO:0010020: chloroplast fission | 3.32E-03 |
| 81 | GO:0010207: photosystem II assembly | 3.32E-03 |
| 82 | GO:0046854: phosphatidylinositol phosphorylation | 3.59E-03 |
| 83 | GO:0009058: biosynthetic process | 3.99E-03 |
| 84 | GO:0009863: salicylic acid mediated signaling pathway | 4.15E-03 |
| 85 | GO:0006418: tRNA aminoacylation for protein translation | 4.43E-03 |
| 86 | GO:0051302: regulation of cell division | 4.43E-03 |
| 87 | GO:0008299: isoprenoid biosynthetic process | 4.43E-03 |
| 88 | GO:0051321: meiotic cell cycle | 4.73E-03 |
| 89 | GO:0007623: circadian rhythm | 5.21E-03 |
| 90 | GO:0009693: ethylene biosynthetic process | 5.34E-03 |
| 91 | GO:0006606: protein import into nucleus | 6.31E-03 |
| 92 | GO:0006662: glycerol ether metabolic process | 6.64E-03 |
| 93 | GO:0009791: post-embryonic development | 7.34E-03 |
| 94 | GO:0008654: phospholipid biosynthetic process | 7.34E-03 |
| 95 | GO:0000302: response to reactive oxygen species | 7.69E-03 |
| 96 | GO:0031047: gene silencing by RNA | 8.05E-03 |
| 97 | GO:0016032: viral process | 8.05E-03 |
| 98 | GO:0030163: protein catabolic process | 8.42E-03 |
| 99 | GO:0051607: defense response to virus | 9.56E-03 |
| 100 | GO:0001666: response to hypoxia | 9.95E-03 |
| 101 | GO:0009816: defense response to bacterium, incompatible interaction | 1.03E-02 |
| 102 | GO:0015995: chlorophyll biosynthetic process | 1.12E-02 |
| 103 | GO:0016311: dephosphorylation | 1.16E-02 |
| 104 | GO:0009817: defense response to fungus, incompatible interaction | 1.20E-02 |
| 105 | GO:0048481: plant ovule development | 1.20E-02 |
| 106 | GO:0006811: ion transport | 1.28E-02 |
| 107 | GO:0010218: response to far red light | 1.28E-02 |
| 108 | GO:0007568: aging | 1.33E-02 |
| 109 | GO:0000724: double-strand break repair via homologous recombination | 1.37E-02 |
| 110 | GO:0032259: methylation | 1.42E-02 |
| 111 | GO:0009637: response to blue light | 1.42E-02 |
| 112 | GO:0009744: response to sucrose | 1.70E-02 |
| 113 | GO:0009409: response to cold | 1.80E-02 |
| 114 | GO:0031347: regulation of defense response | 1.94E-02 |
| 115 | GO:0006364: rRNA processing | 2.10E-02 |
| 116 | GO:0006417: regulation of translation | 2.25E-02 |
| 117 | GO:0009735: response to cytokinin | 2.41E-02 |
| 118 | GO:0048316: seed development | 2.42E-02 |
| 119 | GO:0009626: plant-type hypersensitive response | 2.47E-02 |
| 120 | GO:0016569: covalent chromatin modification | 2.58E-02 |
| 121 | GO:0009416: response to light stimulus | 2.63E-02 |
| 122 | GO:0006396: RNA processing | 2.75E-02 |
| 123 | GO:0055085: transmembrane transport | 3.34E-02 |
| 124 | GO:0009845: seed germination | 3.34E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047958: glycine:2-oxoglutarate aminotransferase activity | 0.00E+00 |
| 2 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 3 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 4 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 5 | GO:0008660: 1-aminocyclopropane-1-carboxylate deaminase activity | 0.00E+00 |
| 6 | GO:0019148: D-cysteine desulfhydrase activity | 0.00E+00 |
| 7 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 8 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 9 | GO:0050126: N-carbamoylputrescine amidase activity | 0.00E+00 |
| 10 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 11 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 12 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 13 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 14 | GO:0008453: alanine-glyoxylate transaminase activity | 1.29E-08 |
| 15 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 3.18E-07 |
| 16 | GO:0016168: chlorophyll binding | 1.21E-06 |
| 17 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 2.91E-06 |
| 18 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 7.58E-05 |
| 19 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 7.58E-05 |
| 20 | GO:0035671: enone reductase activity | 7.58E-05 |
| 21 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.81E-04 |
| 22 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.81E-04 |
| 23 | GO:0004829: threonine-tRNA ligase activity | 1.81E-04 |
| 24 | GO:0019172: glyoxalase III activity | 1.81E-04 |
| 25 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.81E-04 |
| 26 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.81E-04 |
| 27 | GO:0031409: pigment binding | 1.97E-04 |
| 28 | GO:0070402: NADPH binding | 3.05E-04 |
| 29 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 3.05E-04 |
| 30 | GO:0004827: proline-tRNA ligase activity | 3.05E-04 |
| 31 | GO:0022891: substrate-specific transmembrane transporter activity | 3.24E-04 |
| 32 | GO:0004792: thiosulfate sulfurtransferase activity | 4.41E-04 |
| 33 | GO:0043495: protein anchor | 5.87E-04 |
| 34 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 5.87E-04 |
| 35 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.87E-04 |
| 36 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 7.44E-04 |
| 37 | GO:0000293: ferric-chelate reductase activity | 9.07E-04 |
| 38 | GO:0004462: lactoylglutathione lyase activity | 9.07E-04 |
| 39 | GO:0004605: phosphatidate cytidylyltransferase activity | 9.07E-04 |
| 40 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.08E-03 |
| 41 | GO:0019899: enzyme binding | 1.26E-03 |
| 42 | GO:0008135: translation factor activity, RNA binding | 1.66E-03 |
| 43 | GO:0045309: protein phosphorylated amino acid binding | 2.09E-03 |
| 44 | GO:0016844: strictosidine synthase activity | 2.09E-03 |
| 45 | GO:0008047: enzyme activator activity | 2.32E-03 |
| 46 | GO:0019904: protein domain specific binding | 2.56E-03 |
| 47 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.06E-03 |
| 48 | GO:0030170: pyridoxal phosphate binding | 4.20E-03 |
| 49 | GO:0003727: single-stranded RNA binding | 5.66E-03 |
| 50 | GO:0008514: organic anion transmembrane transporter activity | 5.66E-03 |
| 51 | GO:0047134: protein-disulfide reductase activity | 5.98E-03 |
| 52 | GO:0004812: aminoacyl-tRNA ligase activity | 5.98E-03 |
| 53 | GO:0003743: translation initiation factor activity | 6.09E-03 |
| 54 | GO:0008080: N-acetyltransferase activity | 6.64E-03 |
| 55 | GO:0004791: thioredoxin-disulfide reductase activity | 6.99E-03 |
| 56 | GO:0016853: isomerase activity | 6.99E-03 |
| 57 | GO:0048038: quinone binding | 7.69E-03 |
| 58 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.42E-03 |
| 59 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.16E-02 |
| 60 | GO:0008236: serine-type peptidase activity | 1.16E-02 |
| 61 | GO:0050897: cobalt ion binding | 1.33E-02 |
| 62 | GO:0030145: manganese ion binding | 1.33E-02 |
| 63 | GO:0003746: translation elongation factor activity | 1.42E-02 |
| 64 | GO:0003993: acid phosphatase activity | 1.46E-02 |
| 65 | GO:0003924: GTPase activity | 1.48E-02 |
| 66 | GO:0050661: NADP binding | 1.55E-02 |
| 67 | GO:0009055: electron carrier activity | 1.59E-02 |
| 68 | GO:0043621: protein self-association | 1.79E-02 |
| 69 | GO:0005198: structural molecule activity | 1.84E-02 |
| 70 | GO:0051287: NAD binding | 1.94E-02 |
| 71 | GO:0046872: metal ion binding | 2.25E-02 |
| 72 | GO:0003779: actin binding | 2.64E-02 |
| 73 | GO:0015035: protein disulfide oxidoreductase activity | 2.75E-02 |
| 74 | GO:0016829: lyase activity | 3.34E-02 |
| 75 | GO:0005515: protein binding | 3.35E-02 |
| 76 | GO:0004252: serine-type endopeptidase activity | 3.41E-02 |
| 77 | GO:0008565: protein transporter activity | 3.59E-02 |
| 78 | GO:0005507: copper ion binding | 3.74E-02 |
| 79 | GO:0005525: GTP binding | 4.31E-02 |
| 80 | GO:0042802: identical protein binding | 4.71E-02 |
| 81 | GO:0005509: calcium ion binding | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.40E-30 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 3.37E-16 |
| 3 | GO:0009941: chloroplast envelope | 1.23E-13 |
| 4 | GO:0009570: chloroplast stroma | 1.64E-12 |
| 5 | GO:0009534: chloroplast thylakoid | 2.78E-10 |
| 6 | GO:0031977: thylakoid lumen | 1.10E-07 |
| 7 | GO:0009579: thylakoid | 1.15E-07 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.46E-06 |
| 9 | GO:0009523: photosystem II | 2.14E-05 |
| 10 | GO:0010287: plastoglobule | 3.11E-05 |
| 11 | GO:0017101: aminoacyl-tRNA synthetase multienzyme complex | 7.58E-05 |
| 12 | GO:0009782: photosystem I antenna complex | 7.58E-05 |
| 13 | GO:0008290: F-actin capping protein complex | 1.81E-04 |
| 14 | GO:0042651: thylakoid membrane | 2.44E-04 |
| 15 | GO:0009706: chloroplast inner membrane | 3.30E-04 |
| 16 | GO:0010319: stromule | 6.95E-04 |
| 17 | GO:0048046: apoplast | 1.42E-03 |
| 18 | GO:0031969: chloroplast membrane | 1.48E-03 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.87E-03 |
| 20 | GO:0030076: light-harvesting complex | 3.59E-03 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 4.43E-03 |
| 22 | GO:0005777: peroxisome | 5.96E-03 |
| 23 | GO:0009522: photosystem I | 6.99E-03 |
| 24 | GO:0019898: extrinsic component of membrane | 7.34E-03 |
| 25 | GO:0009707: chloroplast outer membrane | 1.20E-02 |
| 26 | GO:0005623: cell | 3.22E-02 |