Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G52160

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080180: 2-methylguanosine metabolic process0.00E+00
2GO:0090069: regulation of ribosome biogenesis0.00E+00
3GO:0071426: ribonucleoprotein complex export from nucleus0.00E+00
4GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)6.26E-08
5GO:0006364: rRNA processing7.91E-07
6GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine3.00E-05
7GO:0010930: negative regulation of auxin mediated signaling pathway3.00E-05
8GO:1902182: shoot apical meristem development3.00E-05
9GO:2000232: regulation of rRNA processing3.00E-05
10GO:0006610: ribosomal protein import into nucleus7.58E-05
11GO:0006606: protein import into nucleus1.20E-04
12GO:0009451: RNA modification1.40E-04
13GO:0007276: gamete generation1.97E-04
14GO:0046345: abscisic acid catabolic process2.67E-04
15GO:0006405: RNA export from nucleus3.42E-04
16GO:0000060: protein import into nucleus, translocation4.20E-04
17GO:0032259: methylation5.13E-04
18GO:0006400: tRNA modification5.88E-04
19GO:0001522: pseudouridine synthesis6.76E-04
20GO:0006607: NLS-bearing protein import into nucleus8.63E-04
21GO:0006349: regulation of gene expression by genetic imprinting9.61E-04
22GO:0006913: nucleocytoplasmic transport1.16E-03
23GO:0008285: negative regulation of cell proliferation1.16E-03
24GO:0051301: cell division1.22E-03
25GO:0010582: floral meristem determinacy1.27E-03
26GO:0010102: lateral root morphogenesis1.38E-03
27GO:0051302: regulation of cell division1.98E-03
28GO:0009561: megagametogenesis2.52E-03
29GO:0051028: mRNA transport2.66E-03
30GO:0010501: RNA secondary structure unwinding2.80E-03
31GO:0006342: chromatin silencing2.94E-03
32GO:0009960: endosperm development2.94E-03
33GO:0006260: DNA replication8.38E-03
34GO:0009909: regulation of flower development9.70E-03
35GO:0006417: regulation of translation9.70E-03
36GO:0009553: embryo sac development1.13E-02
37GO:0009790: embryo development1.51E-02
38GO:0042254: ribosome biogenesis2.36E-02
39GO:0007049: cell cycle2.51E-02
40GO:0048366: leaf development2.61E-02
41GO:0009793: embryo development ending in seed dormancy3.72E-02
RankGO TermAdjusted P value
1GO:0004164: diphthine synthase activity0.00E+00
2GO:0000166: nucleotide binding9.01E-12
3GO:0003723: RNA binding1.56E-05
4GO:0008026: ATP-dependent helicase activity6.61E-05
5GO:0043021: ribonucleoprotein complex binding7.58E-05
6GO:0008168: methyltransferase activity2.36E-04
7GO:0004004: ATP-dependent RNA helicase activity2.85E-04
8GO:0004519: endonuclease activity6.02E-04
9GO:0017056: structural constituent of nuclear pore6.76E-04
10GO:0003899: DNA-directed 5'-3' RNA polymerase activity6.82E-04
11GO:0005487: nucleocytoplasmic transporter activity9.61E-04
12GO:0005543: phospholipid binding1.16E-03
13GO:0001054: RNA polymerase I activity1.16E-03
14GO:0008139: nuclear localization sequence binding1.38E-03
15GO:0003887: DNA-directed DNA polymerase activity1.73E-03
16GO:0043130: ubiquitin binding1.86E-03
17GO:0003713: transcription coactivator activity2.94E-03
18GO:0008536: Ran GTPase binding2.94E-03
19GO:0003729: mRNA binding4.39E-03
20GO:0005096: GTPase activator activity5.41E-03
21GO:0042393: histone binding6.74E-03
22GO:0008565: protein transporter activity1.54E-02
RankGO TermAdjusted P value
1GO:0034455: t-UTP complex0.00E+00
2GO:0005730: nucleolus5.21E-08
3GO:0070545: PeBoW complex6.26E-08
4GO:0034399: nuclear periphery8.44E-06
5GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.70E-05
6GO:0044613: nuclear pore central transport channel7.58E-05
7GO:0031965: nuclear membrane1.52E-04
8GO:0030687: preribosome, large subunit precursor5.88E-04
9GO:0005635: nuclear envelope7.29E-04
10GO:0005736: DNA-directed RNA polymerase I complex8.63E-04
11GO:0005634: nucleus8.73E-04
12GO:0005643: nuclear pore5.23E-03
13GO:0005819: spindle6.54E-03
14GO:0005654: nucleoplasm1.33E-02
15GO:0009524: phragmoplast1.41E-02
16GO:0005743: mitochondrial inner membrane3.40E-02
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Gene type



Gene DE type