GO Enrichment Analysis of Co-expressed Genes with
AT1G50290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018293: protein-FAD linkage | 0.00E+00 |
| 2 | GO:0034553: mitochondrial respiratory chain complex II assembly | 0.00E+00 |
| 3 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 4 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 5 | GO:1900088: regulation of inositol biosynthetic process | 0.00E+00 |
| 6 | GO:1900091: regulation of raffinose biosynthetic process | 0.00E+00 |
| 7 | GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | 0.00E+00 |
| 8 | GO:0009661: chromoplast organization | 0.00E+00 |
| 9 | GO:0010190: cytochrome b6f complex assembly | 7.50E-05 |
| 10 | GO:0055114: oxidation-reduction process | 1.06E-04 |
| 11 | GO:0080065: 4-alpha-methyl-delta7-sterol oxidation | 2.09E-04 |
| 12 | GO:0006285: base-excision repair, AP site formation | 2.09E-04 |
| 13 | GO:0071461: cellular response to redox state | 2.09E-04 |
| 14 | GO:0032956: regulation of actin cytoskeleton organization | 2.09E-04 |
| 15 | GO:0048438: floral whorl development | 2.09E-04 |
| 16 | GO:0000103: sulfate assimilation | 3.71E-04 |
| 17 | GO:0042754: negative regulation of circadian rhythm | 4.66E-04 |
| 18 | GO:0006898: receptor-mediated endocytosis | 4.66E-04 |
| 19 | GO:0080005: photosystem stoichiometry adjustment | 4.66E-04 |
| 20 | GO:0019388: galactose catabolic process | 4.66E-04 |
| 21 | GO:0007154: cell communication | 4.66E-04 |
| 22 | GO:0010220: positive regulation of vernalization response | 4.66E-04 |
| 23 | GO:0048571: long-day photoperiodism | 4.66E-04 |
| 24 | GO:1904143: positive regulation of carotenoid biosynthetic process | 4.66E-04 |
| 25 | GO:0080183: response to photooxidative stress | 4.66E-04 |
| 26 | GO:0043100: pyrimidine nucleobase salvage | 4.66E-04 |
| 27 | GO:0016570: histone modification | 7.59E-04 |
| 28 | GO:0019419: sulfate reduction | 7.59E-04 |
| 29 | GO:0006296: nucleotide-excision repair, DNA incision, 5'-to lesion | 7.59E-04 |
| 30 | GO:1901562: response to paraquat | 7.59E-04 |
| 31 | GO:0009150: purine ribonucleotide metabolic process | 7.59E-04 |
| 32 | GO:0031929: TOR signaling | 7.59E-04 |
| 33 | GO:0044375: regulation of peroxisome size | 7.59E-04 |
| 34 | GO:0010371: regulation of gibberellin biosynthetic process | 1.08E-03 |
| 35 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.08E-03 |
| 36 | GO:0010148: transpiration | 1.08E-03 |
| 37 | GO:0009963: positive regulation of flavonoid biosynthetic process | 1.08E-03 |
| 38 | GO:0009647: skotomorphogenesis | 1.08E-03 |
| 39 | GO:0009590: detection of gravity | 1.08E-03 |
| 40 | GO:0050482: arachidonic acid secretion | 1.08E-03 |
| 41 | GO:2001141: regulation of RNA biosynthetic process | 1.08E-03 |
| 42 | GO:0070534: protein K63-linked ubiquitination | 1.44E-03 |
| 43 | GO:0009649: entrainment of circadian clock | 1.44E-03 |
| 44 | GO:0071585: detoxification of cadmium ion | 1.44E-03 |
| 45 | GO:0071483: cellular response to blue light | 1.44E-03 |
| 46 | GO:0009902: chloroplast relocation | 1.44E-03 |
| 47 | GO:0010021: amylopectin biosynthetic process | 1.44E-03 |
| 48 | GO:0016120: carotene biosynthetic process | 1.83E-03 |
| 49 | GO:0046283: anthocyanin-containing compound metabolic process | 1.83E-03 |
| 50 | GO:0009904: chloroplast accumulation movement | 1.83E-03 |
| 51 | GO:0010236: plastoquinone biosynthetic process | 1.83E-03 |
| 52 | GO:0019252: starch biosynthetic process | 1.94E-03 |
| 53 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.07E-03 |
| 54 | GO:0006555: methionine metabolic process | 2.26E-03 |
| 55 | GO:0070814: hydrogen sulfide biosynthetic process | 2.26E-03 |
| 56 | GO:0000060: protein import into nucleus, translocation | 2.26E-03 |
| 57 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 2.26E-03 |
| 58 | GO:0006301: postreplication repair | 2.26E-03 |
| 59 | GO:0010077: maintenance of inflorescence meristem identity | 2.71E-03 |
| 60 | GO:0019509: L-methionine salvage from methylthioadenosine | 2.71E-03 |
| 61 | GO:0010076: maintenance of floral meristem identity | 2.71E-03 |
| 62 | GO:0017148: negative regulation of translation | 2.71E-03 |
| 63 | GO:0009903: chloroplast avoidance movement | 2.71E-03 |
| 64 | GO:0010189: vitamin E biosynthetic process | 2.71E-03 |
| 65 | GO:0006368: transcription elongation from RNA polymerase II promoter | 3.20E-03 |
| 66 | GO:0010038: response to metal ion | 3.20E-03 |
| 67 | GO:0050790: regulation of catalytic activity | 3.20E-03 |
| 68 | GO:0016559: peroxisome fission | 3.71E-03 |
| 69 | GO:0006644: phospholipid metabolic process | 3.71E-03 |
| 70 | GO:0048564: photosystem I assembly | 3.71E-03 |
| 71 | GO:0005978: glycogen biosynthetic process | 3.71E-03 |
| 72 | GO:0030091: protein repair | 3.71E-03 |
| 73 | GO:0050821: protein stabilization | 3.71E-03 |
| 74 | GO:0009231: riboflavin biosynthetic process | 3.71E-03 |
| 75 | GO:0006102: isocitrate metabolic process | 3.71E-03 |
| 76 | GO:0071482: cellular response to light stimulus | 4.24E-03 |
| 77 | GO:0015996: chlorophyll catabolic process | 4.24E-03 |
| 78 | GO:0048574: long-day photoperiodism, flowering | 4.24E-03 |
| 79 | GO:0009407: toxin catabolic process | 4.28E-03 |
| 80 | GO:0009739: response to gibberellin | 4.38E-03 |
| 81 | GO:0009821: alkaloid biosynthetic process | 4.80E-03 |
| 82 | GO:0034765: regulation of ion transmembrane transport | 4.80E-03 |
| 83 | GO:0006099: tricarboxylic acid cycle | 5.13E-03 |
| 84 | GO:0009970: cellular response to sulfate starvation | 5.99E-03 |
| 85 | GO:0009641: shade avoidance | 5.99E-03 |
| 86 | GO:0009640: photomorphogenesis | 6.33E-03 |
| 87 | GO:0009658: chloroplast organization | 6.61E-03 |
| 88 | GO:0009773: photosynthetic electron transport in photosystem I | 6.62E-03 |
| 89 | GO:0008285: negative regulation of cell proliferation | 6.62E-03 |
| 90 | GO:0006352: DNA-templated transcription, initiation | 6.62E-03 |
| 91 | GO:0000272: polysaccharide catabolic process | 6.62E-03 |
| 92 | GO:0048229: gametophyte development | 6.62E-03 |
| 93 | GO:0006790: sulfur compound metabolic process | 7.28E-03 |
| 94 | GO:0010582: floral meristem determinacy | 7.28E-03 |
| 95 | GO:0009767: photosynthetic electron transport chain | 7.96E-03 |
| 96 | GO:0006006: glucose metabolic process | 7.96E-03 |
| 97 | GO:0009718: anthocyanin-containing compound biosynthetic process | 7.96E-03 |
| 98 | GO:0009585: red, far-red light phototransduction | 8.54E-03 |
| 99 | GO:0010207: photosystem II assembly | 8.66E-03 |
| 100 | GO:0007015: actin filament organization | 8.66E-03 |
| 101 | GO:0007031: peroxisome organization | 9.37E-03 |
| 102 | GO:0006071: glycerol metabolic process | 1.01E-02 |
| 103 | GO:0019344: cysteine biosynthetic process | 1.09E-02 |
| 104 | GO:0045454: cell redox homeostasis | 1.09E-02 |
| 105 | GO:0051017: actin filament bundle assembly | 1.09E-02 |
| 106 | GO:0008299: isoprenoid biosynthetic process | 1.17E-02 |
| 107 | GO:0010073: meristem maintenance | 1.17E-02 |
| 108 | GO:0031408: oxylipin biosynthetic process | 1.25E-02 |
| 109 | GO:0006366: transcription from RNA polymerase II promoter | 1.25E-02 |
| 110 | GO:0016226: iron-sulfur cluster assembly | 1.33E-02 |
| 111 | GO:0040007: growth | 1.41E-02 |
| 112 | GO:0010227: floral organ abscission | 1.41E-02 |
| 113 | GO:0006284: base-excision repair | 1.50E-02 |
| 114 | GO:0006817: phosphate ion transport | 1.50E-02 |
| 115 | GO:0009753: response to jasmonic acid | 1.56E-02 |
| 116 | GO:0042631: cellular response to water deprivation | 1.68E-02 |
| 117 | GO:0042335: cuticle development | 1.68E-02 |
| 118 | GO:0042391: regulation of membrane potential | 1.68E-02 |
| 119 | GO:0080022: primary root development | 1.68E-02 |
| 120 | GO:0009741: response to brassinosteroid | 1.77E-02 |
| 121 | GO:0006662: glycerol ether metabolic process | 1.77E-02 |
| 122 | GO:0010182: sugar mediated signaling pathway | 1.77E-02 |
| 123 | GO:0042752: regulation of circadian rhythm | 1.86E-02 |
| 124 | GO:0007623: circadian rhythm | 2.11E-02 |
| 125 | GO:0030163: protein catabolic process | 2.25E-02 |
| 126 | GO:0009567: double fertilization forming a zygote and endosperm | 2.36E-02 |
| 127 | GO:0006464: cellular protein modification process | 2.36E-02 |
| 128 | GO:0071805: potassium ion transmembrane transport | 2.46E-02 |
| 129 | GO:0016126: sterol biosynthetic process | 2.67E-02 |
| 130 | GO:0015995: chlorophyll biosynthetic process | 3.00E-02 |
| 131 | GO:0010411: xyloglucan metabolic process | 3.00E-02 |
| 132 | GO:0048573: photoperiodism, flowering | 3.00E-02 |
| 133 | GO:0035556: intracellular signal transduction | 3.14E-02 |
| 134 | GO:0018298: protein-chromophore linkage | 3.23E-02 |
| 135 | GO:0006811: ion transport | 3.46E-02 |
| 136 | GO:0045893: positive regulation of transcription, DNA-templated | 3.48E-02 |
| 137 | GO:0010119: regulation of stomatal movement | 3.58E-02 |
| 138 | GO:0010043: response to zinc ion | 3.58E-02 |
| 139 | GO:0007568: aging | 3.58E-02 |
| 140 | GO:0009723: response to ethylene | 3.78E-02 |
| 141 | GO:0034599: cellular response to oxidative stress | 3.94E-02 |
| 142 | GO:0015979: photosynthesis | 4.61E-02 |
| 143 | GO:0009636: response to toxic substance | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050342: tocopherol O-methyltransferase activity | 0.00E+00 |
| 2 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0015205: nucleobase transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0047504: (-)-menthol dehydrogenase activity | 0.00E+00 |
| 5 | GO:0047501: (+)-neomenthol dehydrogenase activity | 0.00E+00 |
| 6 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 7 | GO:0016491: oxidoreductase activity | 1.31E-07 |
| 8 | GO:0008106: alcohol dehydrogenase (NADP+) activity | 1.73E-05 |
| 9 | GO:0042802: identical protein binding | 1.53E-04 |
| 10 | GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | 2.09E-04 |
| 11 | GO:0010313: phytochrome binding | 2.09E-04 |
| 12 | GO:0016783: sulfurtransferase activity | 2.09E-04 |
| 13 | GO:0000703: oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity | 2.09E-04 |
| 14 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 2.09E-04 |
| 15 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 2.09E-04 |
| 16 | GO:0043425: bHLH transcription factor binding | 4.66E-04 |
| 17 | GO:0033741: adenylyl-sulfate reductase (glutathione) activity | 4.66E-04 |
| 18 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 4.66E-04 |
| 19 | GO:0033201: alpha-1,4-glucan synthase activity | 4.66E-04 |
| 20 | GO:0050347: trans-octaprenyltranstransferase activity | 4.66E-04 |
| 21 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 4.66E-04 |
| 22 | GO:0004046: aminoacylase activity | 4.66E-04 |
| 23 | GO:0003988: acetyl-CoA C-acyltransferase activity | 4.66E-04 |
| 24 | GO:0009973: adenylyl-sulfate reductase activity | 4.66E-04 |
| 25 | GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding | 4.66E-04 |
| 26 | GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity | 4.66E-04 |
| 27 | GO:0004614: phosphoglucomutase activity | 4.66E-04 |
| 28 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 4.66E-04 |
| 29 | GO:0016868: intramolecular transferase activity, phosphotransferases | 4.66E-04 |
| 30 | GO:0004180: carboxypeptidase activity | 7.59E-04 |
| 31 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 7.59E-04 |
| 32 | GO:0004373: glycogen (starch) synthase activity | 7.59E-04 |
| 33 | GO:0003913: DNA photolyase activity | 7.59E-04 |
| 34 | GO:0032947: protein complex scaffold | 7.59E-04 |
| 35 | GO:0004557: alpha-galactosidase activity | 7.59E-04 |
| 36 | GO:0003935: GTP cyclohydrolase II activity | 7.59E-04 |
| 37 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 7.59E-04 |
| 38 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 7.59E-04 |
| 39 | GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding | 7.59E-04 |
| 40 | GO:0000254: C-4 methylsterol oxidase activity | 1.08E-03 |
| 41 | GO:0048027: mRNA 5'-UTR binding | 1.08E-03 |
| 42 | GO:0004792: thiosulfate sulfurtransferase activity | 1.08E-03 |
| 43 | GO:0047627: adenylylsulfatase activity | 1.08E-03 |
| 44 | GO:0001053: plastid sigma factor activity | 1.44E-03 |
| 45 | GO:0019104: DNA N-glycosylase activity | 1.44E-03 |
| 46 | GO:0016987: sigma factor activity | 1.44E-03 |
| 47 | GO:0009011: starch synthase activity | 1.44E-03 |
| 48 | GO:0008177: succinate dehydrogenase (ubiquinone) activity | 1.83E-03 |
| 49 | GO:0004623: phospholipase A2 activity | 1.83E-03 |
| 50 | GO:0048038: quinone binding | 2.07E-03 |
| 51 | GO:0004709: MAP kinase kinase kinase activity | 2.26E-03 |
| 52 | GO:0000293: ferric-chelate reductase activity | 2.26E-03 |
| 53 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 2.26E-03 |
| 54 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.35E-03 |
| 55 | GO:0016161: beta-amylase activity | 2.71E-03 |
| 56 | GO:0005242: inward rectifier potassium channel activity | 2.71E-03 |
| 57 | GO:0016621: cinnamoyl-CoA reductase activity | 3.20E-03 |
| 58 | GO:0009881: photoreceptor activity | 3.20E-03 |
| 59 | GO:0008236: serine-type peptidase activity | 3.69E-03 |
| 60 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 4.80E-03 |
| 61 | GO:0071949: FAD binding | 4.80E-03 |
| 62 | GO:0016844: strictosidine synthase activity | 5.38E-03 |
| 63 | GO:0004364: glutathione transferase activity | 6.08E-03 |
| 64 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 7.96E-03 |
| 65 | GO:0005315: inorganic phosphate transmembrane transporter activity | 7.96E-03 |
| 66 | GO:0031072: heat shock protein binding | 7.96E-03 |
| 67 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 8.66E-03 |
| 68 | GO:0001046: core promoter sequence-specific DNA binding | 1.09E-02 |
| 69 | GO:0051536: iron-sulfur cluster binding | 1.09E-02 |
| 70 | GO:0015035: protein disulfide oxidoreductase activity | 1.25E-02 |
| 71 | GO:0004672: protein kinase activity | 1.26E-02 |
| 72 | GO:0047134: protein-disulfide reductase activity | 1.59E-02 |
| 73 | GO:0030551: cyclic nucleotide binding | 1.68E-02 |
| 74 | GO:0005249: voltage-gated potassium channel activity | 1.68E-02 |
| 75 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 1.77E-02 |
| 76 | GO:0008080: N-acetyltransferase activity | 1.77E-02 |
| 77 | GO:0004527: exonuclease activity | 1.77E-02 |
| 78 | GO:0004791: thioredoxin-disulfide reductase activity | 1.86E-02 |
| 79 | GO:0010181: FMN binding | 1.86E-02 |
| 80 | GO:0050662: coenzyme binding | 1.86E-02 |
| 81 | GO:0004518: nuclease activity | 2.15E-02 |
| 82 | GO:0004197: cysteine-type endopeptidase activity | 2.15E-02 |
| 83 | GO:0016791: phosphatase activity | 2.36E-02 |
| 84 | GO:0016413: O-acetyltransferase activity | 2.57E-02 |
| 85 | GO:0030247: polysaccharide binding | 3.00E-02 |
| 86 | GO:0004721: phosphoprotein phosphatase activity | 3.00E-02 |
| 87 | GO:0000287: magnesium ion binding | 3.21E-02 |
| 88 | GO:0016788: hydrolase activity, acting on ester bonds | 3.33E-02 |
| 89 | GO:0030145: manganese ion binding | 3.58E-02 |
| 90 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.58E-02 |
| 91 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.82E-02 |
| 92 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 4.07E-02 |
| 93 | GO:0005515: protein binding | 4.21E-02 |
| 94 | GO:0061630: ubiquitin protein ligase activity | 4.25E-02 |
| 95 | GO:0005198: structural molecule activity | 4.97E-02 |
| 96 | GO:0015293: symporter activity | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031313: extrinsic component of endosome membrane | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 6.31E-09 |
| 3 | GO:0005777: peroxisome | 1.92E-05 |
| 4 | GO:0031972: chloroplast intermembrane space | 2.09E-04 |
| 5 | GO:0000152: nuclear ubiquitin ligase complex | 2.09E-04 |
| 6 | GO:0031932: TORC2 complex | 2.09E-04 |
| 7 | GO:0031234: extrinsic component of cytoplasmic side of plasma membrane | 2.09E-04 |
| 8 | GO:0031969: chloroplast membrane | 3.42E-04 |
| 9 | GO:0031931: TORC1 complex | 7.59E-04 |
| 10 | GO:0009535: chloroplast thylakoid membrane | 9.28E-04 |
| 11 | GO:0005773: vacuole | 9.81E-04 |
| 12 | GO:0031372: UBC13-MMS2 complex | 1.44E-03 |
| 13 | GO:0016593: Cdc73/Paf1 complex | 1.44E-03 |
| 14 | GO:0009526: plastid envelope | 1.44E-03 |
| 15 | GO:0009501: amyloplast | 3.71E-03 |
| 16 | GO:0031982: vesicle | 3.71E-03 |
| 17 | GO:0005779: integral component of peroxisomal membrane | 4.24E-03 |
| 18 | GO:0042644: chloroplast nucleoid | 4.80E-03 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.80E-03 |
| 20 | GO:0016604: nuclear body | 5.38E-03 |
| 21 | GO:0005884: actin filament | 6.62E-03 |
| 22 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 7.43E-03 |
| 23 | GO:0005764: lysosome | 8.66E-03 |
| 24 | GO:0009706: chloroplast inner membrane | 1.22E-02 |
| 25 | GO:0010319: stromule | 2.46E-02 |
| 26 | GO:0005778: peroxisomal membrane | 2.46E-02 |
| 27 | GO:0009570: chloroplast stroma | 2.85E-02 |
| 28 | GO:0031977: thylakoid lumen | 4.32E-02 |