co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G49975

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
2	GO:0019684: photosynthesis, light reaction	2.09E-06
3	GO:0010207: photosystem II assembly	3.51E-06
4	GO:0000476: maturation of 4.5S rRNA	6.06E-06
5	GO:0000967: rRNA 5'-end processing	6.06E-06
6	GO:0042371: vitamin K biosynthetic process	6.06E-06
7	GO:0006419: alanyl-tRNA aminoacylation	6.06E-06
8	GO:0035304: regulation of protein dephosphorylation	1.65E-05
9	GO:0080181: lateral root branching	1.65E-05
10	GO:0034470: ncRNA processing	1.65E-05
11	GO:0005977: glycogen metabolic process	3.04E-05
12	GO:0010021: amylopectin biosynthetic process	6.61E-05
13	GO:0016558: protein import into peroxisome matrix	8.72E-05
14	GO:0010236: plastoquinone biosynthetic process	8.72E-05
15	GO:0042549: photosystem II stabilization	1.10E-04
16	GO:0042372: phylloquinone biosynthetic process	1.34E-04
17	GO:0009772: photosynthetic electron transport in photosystem II	1.60E-04
18	GO:0006400: tRNA modification	1.60E-04
19	GO:0010205: photoinhibition	2.72E-04
20	GO:0009089: lysine biosynthetic process via diaminopimelate	3.33E-04
21	GO:0006302: double-strand break repair	4.30E-04
22	GO:0010030: positive regulation of seed germination	4.64E-04
23	GO:0051321: meiotic cell cycle	6.04E-04
24	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	7.52E-04
25	GO:0042631: cellular response to water deprivation	7.91E-04
26	GO:0019252: starch biosynthetic process	9.08E-04
27	GO:0006635: fatty acid beta-oxidation	9.49E-04
28	GO:0016311: dephosphorylation	1.38E-03
29	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	7.11E-03
30	GO:0006457: protein folding	1.64E-02
31	GO:0005975: carbohydrate metabolic process	3.04E-02
32	GO:0009793: embryo development ending in seed dormancy	4.11E-02

Rank	GO Term	Adjusted P value
1	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
2	GO:0042623: ATPase activity, coupled	0.00E+00
3	GO:0004813: alanine-tRNA ligase activity	6.06E-06
4	GO:0010242: oxygen evolving activity	6.06E-06
5	GO:0019156: isoamylase activity	1.65E-05
6	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.65E-05
7	GO:0004659: prenyltransferase activity	6.61E-05
8	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.84E-05
9	GO:0004556: alpha-amylase activity	1.10E-04
10	GO:0000049: tRNA binding	3.65E-04
11	GO:0008266: poly(U) RNA binding	4.30E-04
12	GO:0005528: FK506 binding	5.33E-04
13	GO:0004722: protein serine/threonine phosphatase activity	6.01E-04
14	GO:0008408: 3'-5' exonuclease activity	6.04E-04
15	GO:0016597: amino acid binding	1.16E-03
16	GO:0030145: manganese ion binding	1.57E-03
17	GO:0003993: acid phosphatase activity	1.72E-03
18	GO:0004519: endonuclease activity	9.66E-03
19	GO:0008289: lipid binding	1.15E-02
20	GO:0016887: ATPase activity	1.24E-02
21	GO:0005509: calcium ion binding	2.13E-02
22	GO:0005515: protein binding	2.44E-02
23	GO:0016491: oxidoreductase activity	2.75E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009543: chloroplast thylakoid lumen	3.36E-06
3	GO:0000791: euchromatin	6.06E-06
4	GO:0030870: Mre11 complex	1.65E-05
5	GO:0031977: thylakoid lumen	5.98E-05
6	GO:0000795: synaptonemal complex	8.72E-05
7	GO:0030095: chloroplast photosystem II	4.30E-04
8	GO:0009654: photosystem II oxygen evolving complex	5.68E-04
9	GO:0019898: extrinsic component of membrane	9.08E-04
10	GO:0000785: chromatin	9.90E-04
11	GO:0005778: peroxisomal membrane	1.12E-03
12	GO:0009507: chloroplast	1.23E-03
13	GO:0009579: thylakoid	1.37E-03
14	GO:0009570: chloroplast stroma	2.30E-03
15	GO:0010287: plastoglobule	3.43E-03
16	GO:0031969: chloroplast membrane	6.94E-03
17	GO:0009534: chloroplast thylakoid	1.56E-02
18	GO:0009535: chloroplast thylakoid membrane	4.01E-02