GO Enrichment Analysis of Co-expressed Genes with
AT1G49410
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 2 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 3 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 4 | GO:0006412: translation | 5.92E-103 |
| 5 | GO:0042254: ribosome biogenesis | 5.49E-40 |
| 6 | GO:0000027: ribosomal large subunit assembly | 2.35E-10 |
| 7 | GO:0006626: protein targeting to mitochondrion | 5.15E-09 |
| 8 | GO:0009955: adaxial/abaxial pattern specification | 1.32E-06 |
| 9 | GO:0000028: ribosomal small subunit assembly | 3.28E-06 |
| 10 | GO:0002181: cytoplasmic translation | 7.70E-06 |
| 11 | GO:0010162: seed dormancy process | 1.21E-05 |
| 12 | GO:0009735: response to cytokinin | 7.04E-05 |
| 13 | GO:0006364: rRNA processing | 1.59E-04 |
| 14 | GO:0006407: rRNA export from nucleus | 2.11E-04 |
| 15 | GO:0031120: snRNA pseudouridine synthesis | 2.11E-04 |
| 16 | GO:0031118: rRNA pseudouridine synthesis | 2.11E-04 |
| 17 | GO:0015801: aromatic amino acid transport | 2.11E-04 |
| 18 | GO:0030490: maturation of SSU-rRNA | 2.11E-04 |
| 19 | GO:0000494: box C/D snoRNA 3'-end processing | 2.11E-04 |
| 20 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.11E-04 |
| 21 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.11E-04 |
| 22 | GO:1990258: histone glutamine methylation | 2.11E-04 |
| 23 | GO:0006913: nucleocytoplasmic transport | 4.36E-04 |
| 24 | GO:0048569: post-embryonic animal organ development | 4.71E-04 |
| 25 | GO:0009967: positive regulation of signal transduction | 4.71E-04 |
| 26 | GO:0006413: translational initiation | 6.08E-04 |
| 27 | GO:1902626: assembly of large subunit precursor of preribosome | 7.67E-04 |
| 28 | GO:0042256: mature ribosome assembly | 7.67E-04 |
| 29 | GO:0045039: protein import into mitochondrial inner membrane | 7.67E-04 |
| 30 | GO:0009944: polarity specification of adaxial/abaxial axis | 8.76E-04 |
| 31 | GO:0007004: telomere maintenance via telomerase | 1.09E-03 |
| 32 | GO:0009855: determination of bilateral symmetry | 1.09E-03 |
| 33 | GO:0007005: mitochondrion organization | 1.15E-03 |
| 34 | GO:0009294: DNA mediated transformation | 1.25E-03 |
| 35 | GO:0042273: ribosomal large subunit biogenesis | 1.45E-03 |
| 36 | GO:0010197: polar nucleus fusion | 1.71E-03 |
| 37 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.85E-03 |
| 38 | GO:0031167: rRNA methylation | 1.85E-03 |
| 39 | GO:0016070: RNA metabolic process | 2.28E-03 |
| 40 | GO:0000470: maturation of LSU-rRNA | 2.28E-03 |
| 41 | GO:0000398: mRNA splicing, via spliceosome | 2.32E-03 |
| 42 | GO:0000245: spliceosomal complex assembly | 2.74E-03 |
| 43 | GO:0015031: protein transport | 3.02E-03 |
| 44 | GO:0080186: developmental vegetative growth | 3.23E-03 |
| 45 | GO:0001522: pseudouridine synthesis | 3.74E-03 |
| 46 | GO:0035265: organ growth | 3.74E-03 |
| 47 | GO:0001558: regulation of cell growth | 4.29E-03 |
| 48 | GO:0001510: RNA methylation | 4.29E-03 |
| 49 | GO:0000387: spliceosomal snRNP assembly | 5.44E-03 |
| 50 | GO:0030422: production of siRNA involved in RNA interference | 6.06E-03 |
| 51 | GO:0006879: cellular iron ion homeostasis | 6.69E-03 |
| 52 | GO:0010015: root morphogenesis | 6.69E-03 |
| 53 | GO:0006820: anion transport | 7.36E-03 |
| 54 | GO:0006446: regulation of translational initiation | 8.75E-03 |
| 55 | GO:0030150: protein import into mitochondrial matrix | 1.10E-02 |
| 56 | GO:0016569: covalent chromatin modification | 1.16E-02 |
| 57 | GO:0051302: regulation of cell division | 1.18E-02 |
| 58 | GO:0003333: amino acid transmembrane transport | 1.26E-02 |
| 59 | GO:0016226: iron-sulfur cluster assembly | 1.34E-02 |
| 60 | GO:0071215: cellular response to abscisic acid stimulus | 1.43E-02 |
| 61 | GO:0042127: regulation of cell proliferation | 1.52E-02 |
| 62 | GO:0008033: tRNA processing | 1.70E-02 |
| 63 | GO:0000413: protein peptidyl-prolyl isomerization | 1.70E-02 |
| 64 | GO:0006606: protein import into nucleus | 1.70E-02 |
| 65 | GO:0009960: endosperm development | 1.79E-02 |
| 66 | GO:0006635: fatty acid beta-oxidation | 2.08E-02 |
| 67 | GO:0080156: mitochondrial mRNA modification | 2.08E-02 |
| 68 | GO:0032502: developmental process | 2.18E-02 |
| 69 | GO:0009793: embryo development ending in seed dormancy | 2.81E-02 |
| 70 | GO:0006811: ion transport | 3.50E-02 |
| 71 | GO:0006865: amino acid transport | 3.74E-02 |
| 72 | GO:0006099: tricarboxylic acid cycle | 3.99E-02 |
| 73 | GO:0008283: cell proliferation | 4.63E-02 |
| 74 | GO:0009644: response to high light intensity | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 1.72E-120 |
| 3 | GO:0003729: mRNA binding | 4.14E-17 |
| 4 | GO:0019843: rRNA binding | 2.32E-13 |
| 5 | GO:0003723: RNA binding | 1.52E-09 |
| 6 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.56E-06 |
| 7 | GO:0004407: histone deacetylase activity | 5.12E-05 |
| 8 | GO:0030515: snoRNA binding | 1.40E-04 |
| 9 | GO:0048037: cofactor binding | 2.11E-04 |
| 10 | GO:1990259: histone-glutamine methyltransferase activity | 2.11E-04 |
| 11 | GO:0001055: RNA polymerase II activity | 3.21E-04 |
| 12 | GO:0001054: RNA polymerase I activity | 4.36E-04 |
| 13 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 4.71E-04 |
| 14 | GO:0036455: iron-sulfur transferase activity | 4.71E-04 |
| 15 | GO:0015173: aromatic amino acid transmembrane transporter activity | 4.71E-04 |
| 16 | GO:0070034: telomerase RNA binding | 4.71E-04 |
| 17 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 4.71E-04 |
| 18 | GO:0005078: MAP-kinase scaffold activity | 4.71E-04 |
| 19 | GO:0001056: RNA polymerase III activity | 4.99E-04 |
| 20 | GO:0008649: rRNA methyltransferase activity | 7.67E-04 |
| 21 | GO:0008097: 5S rRNA binding | 1.09E-03 |
| 22 | GO:0005275: amine transmembrane transporter activity | 1.85E-03 |
| 23 | GO:0008198: ferrous iron binding | 1.85E-03 |
| 24 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 2.28E-03 |
| 25 | GO:0008235: metalloexopeptidase activity | 3.23E-03 |
| 26 | GO:0043022: ribosome binding | 3.74E-03 |
| 27 | GO:0015288: porin activity | 3.74E-03 |
| 28 | GO:0008135: translation factor activity, RNA binding | 4.29E-03 |
| 29 | GO:0008308: voltage-gated anion channel activity | 4.29E-03 |
| 30 | GO:0003743: translation initiation factor activity | 4.71E-03 |
| 31 | GO:0044183: protein binding involved in protein folding | 6.69E-03 |
| 32 | GO:0015266: protein channel activity | 8.04E-03 |
| 33 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 8.67E-03 |
| 34 | GO:0008536: Ran GTPase binding | 1.79E-02 |
| 35 | GO:0008080: N-acetyltransferase activity | 1.79E-02 |
| 36 | GO:0008565: protein transporter activity | 1.86E-02 |
| 37 | GO:0000166: nucleotide binding | 2.99E-02 |
| 38 | GO:0003746: translation elongation factor activity | 3.86E-02 |
| 39 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.24E-02 |
| 40 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 2 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 3 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 5.06E-75 |
| 5 | GO:0005840: ribosome | 7.46E-74 |
| 6 | GO:0022626: cytosolic ribosome | 1.71E-71 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 2.73E-53 |
| 8 | GO:0005730: nucleolus | 3.39E-28 |
| 9 | GO:0005737: cytoplasm | 6.03E-22 |
| 10 | GO:0005829: cytosol | 1.48E-20 |
| 11 | GO:0009506: plasmodesma | 4.96E-18 |
| 12 | GO:0015934: large ribosomal subunit | 1.74E-16 |
| 13 | GO:0015935: small ribosomal subunit | 4.70E-10 |
| 14 | GO:0005774: vacuolar membrane | 7.43E-08 |
| 15 | GO:0016020: membrane | 1.18E-07 |
| 16 | GO:0005773: vacuole | 1.73E-07 |
| 17 | GO:0005758: mitochondrial intermembrane space | 1.30E-06 |
| 18 | GO:0005618: cell wall | 6.65E-06 |
| 19 | GO:0030686: 90S preribosome | 2.11E-04 |
| 20 | GO:0005736: DNA-directed RNA polymerase I complex | 2.70E-04 |
| 21 | GO:0005666: DNA-directed RNA polymerase III complex | 3.21E-04 |
| 22 | GO:0015030: Cajal body | 3.21E-04 |
| 23 | GO:0000418: DNA-directed RNA polymerase IV complex | 3.76E-04 |
| 24 | GO:0005852: eukaryotic translation initiation factor 3 complex | 4.36E-04 |
| 25 | GO:0071010: prespliceosome | 4.71E-04 |
| 26 | GO:0005665: DNA-directed RNA polymerase II, core complex | 4.99E-04 |
| 27 | GO:0005743: mitochondrial inner membrane | 6.25E-04 |
| 28 | GO:0034715: pICln-Sm protein complex | 7.67E-04 |
| 29 | GO:0034719: SMN-Sm protein complex | 7.67E-04 |
| 30 | GO:0005853: eukaryotic translation elongation factor 1 complex | 7.67E-04 |
| 31 | GO:0031429: box H/ACA snoRNP complex | 1.09E-03 |
| 32 | GO:0005682: U5 snRNP | 1.45E-03 |
| 33 | GO:0009507: chloroplast | 1.62E-03 |
| 34 | GO:0005687: U4 snRNP | 1.85E-03 |
| 35 | GO:0097526: spliceosomal tri-snRNP complex | 1.85E-03 |
| 36 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.16E-03 |
| 37 | GO:0031428: box C/D snoRNP complex | 2.28E-03 |
| 38 | GO:0000243: commitment complex | 2.28E-03 |
| 39 | GO:0005886: plasma membrane | 2.61E-03 |
| 40 | GO:0005689: U12-type spliceosomal complex | 2.74E-03 |
| 41 | GO:0016272: prefoldin complex | 2.74E-03 |
| 42 | GO:0005688: U6 snRNP | 3.74E-03 |
| 43 | GO:0046930: pore complex | 4.29E-03 |
| 44 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 4.29E-03 |
| 45 | GO:0005742: mitochondrial outer membrane translocase complex | 4.29E-03 |
| 46 | GO:0005685: U1 snRNP | 4.85E-03 |
| 47 | GO:0005622: intracellular | 5.30E-03 |
| 48 | GO:0071011: precatalytic spliceosome | 5.44E-03 |
| 49 | GO:0016604: nuclear body | 5.44E-03 |
| 50 | GO:0005686: U2 snRNP | 6.06E-03 |
| 51 | GO:0071013: catalytic step 2 spliceosome | 6.69E-03 |
| 52 | GO:0032040: small-subunit processome | 7.36E-03 |
| 53 | GO:0019013: viral nucleocapsid | 8.04E-03 |
| 54 | GO:0000419: DNA-directed RNA polymerase V complex | 1.02E-02 |
| 55 | GO:0005681: spliceosomal complex | 1.03E-02 |
| 56 | GO:0005834: heterotrimeric G-protein complex | 1.09E-02 |
| 57 | GO:0005741: mitochondrial outer membrane | 1.26E-02 |
| 58 | GO:0005759: mitochondrial matrix | 1.95E-02 |
| 59 | GO:0016592: mediator complex | 2.18E-02 |
| 60 | GO:0030529: intracellular ribonucleoprotein complex | 2.70E-02 |